RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 ADARB1P78563 741 aaKnown RBP12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 PDZD11Q5EBL8 140 aa12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 VWA1Q6PCB0 445 aa12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 KIAA0907Q7Z7F0 614 aaPredicted RBP12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 ZNF582Q96NG8 517 aaPredicted RBP12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 NUDT22Q9BRQ3 303 aa12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 SLC19A3Q9BZV2 496 aa12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 NOSIPQ9Y314 301 aaKnown RBP12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 TMEM184BQ9Y519 407 aaPredicted RBP12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 EVPLQ92817 2033 aa12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 CSO75390 466 aaKnown RBP12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 GYPBP06028 91 aa12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 LIPCP11150 499 aa12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 GNG10P50151 68 aa12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 HTR4Q13639 388 aa12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 KDF1Q8NAX2 398 aaPredicted RBP12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 IP6K3Q96PC2 410 aa12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 MOGAT1Q96PD6 335 aa12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 KIF25Q9UIL4 384 aa12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 PCDHB10Q9UN67 800 aa12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 SLC22A23A1A5C7 686 aa12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 HELTA6NFD8 242 aa12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 POLR2IP36954 125 aaKnown RBP12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 HLA-BQ31612 363 aa12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 LEXMQ3ZCV2 418 aa12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 LANCL3Q6ZV70 420 aa12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 RLIMQ9NVW2 624 aa12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 YTHDF2Q9Y5A9 579 aaKnown RBP12.25□□□□□ -0.45
RAPGEF1-201ENST00000372189 TMEM82A0PJX8 343 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 OR2A25A4D2G3 310 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 SLC16A7O60669 478 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 UBL3O95164 117 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 SERPINE2P07093 398 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 TACR3P29371 465 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 PDE7AQ13946 482 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 C9orf135Q5VTT2 229 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 LCN10Q6JVE6 187 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 RNF113BQ8IZP6 322 aaKnown RBP12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 FAM131CQ96AQ9 280 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 ZNF681Q96N22 645 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 ARV1Q9H2C2 271 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 ZNF768Q9H5H4 540 aaKnown RBP12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 GMPR2Q9P2T1 348 aaKnown RBP12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 NDRG3Q9UGV2 375 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 ARL2-SNX15V9GYD0 113 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 TTRP02766 147 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 APEHP13798 732 aaKnown RBP12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 ADPRMQ3LIE5 342 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 ACTBL2Q562R1 376 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 AMDHD1Q96NU7 426 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 SIAEQ9HAT2 523 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 DNAJB11Q9UBS4 358 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 AKR7A2O43488 359 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 DPM1O60762 260 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 TMIGD3P0DMS9 266 aaPredicted RBP12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 PRPH2P23942 346 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 ILKQ13418 452 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 CLINT1Q14677 625 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 KIAA1958Q8N8K9 716 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 ZNF454Q8N9F8 522 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 NRIP3Q9NQ35 241 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 ANKRD10Q9NXR5 420 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 PCSK6P29122 969 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 ARR3P36575 388 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 CAPZBP47756 277 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 BEX5Q5H9J7 111 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 SIGIRRQ6IA17 410 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 MEX3BQ6ZN04 569 aaKnown RBP12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 Q7L0L9 218 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 TECPR1Q7Z6L1 1165 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 CCL4L1Q8NHW4 92 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 TMEM18Q96B42 140 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 NICN1Q9BSH3 213 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 LRIT2A6NDA9 550 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 CBR3O75828 277 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 SCGB1A1P11684 91 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 SNRPBP14678 240 aaKnown RBP12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 ENPP1P22413 925 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 SLC19A1P41440 591 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 EIF1P41567 113 aaKnown RBP12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 CLDN17P56750 224 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 Q1RN00 199 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 HES3Q5TGS1 186 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 SFXN4Q6P4A7 337 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 TMEM64Q6YI46 380 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 AAED1Q7RTV5 226 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 OR10K1Q8NGX5 313 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 GLIPR2Q9H4G4 154 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 RAB9BQ9NP90 201 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 SERTAD4Q9NUC0 356 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 ZNF586Q9NXT0 402 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 LOXHD1Q8IVV2 1947 aa12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 MYO5AQ9Y4I1 1855 aaKnown RBP12.24□□□□□ -0.45
RAPGEF1-201ENST00000372189 PRAMEF25A6NGN4 478 aa12.23□□□□□ -0.45
RAPGEF1-201ENST00000372189 CD300LBA8K4G0 201 aa12.23□□□□□ -0.45
RAPGEF1-201ENST00000372189 TCRBP04435 133 aa12.23□□□□□ -0.45
RAPGEF1-201ENST00000372189 TACR1P25103 407 aa12.23□□□□□ -0.45
RAPGEF1-201ENST00000372189 NOVA1P51513 510 aaKnown RBP12.23□□□□□ -0.45
RAPGEF1-201ENST00000372189 CLDN6P56747 220 aa12.23□□□□□ -0.45
RAPGEF1-201ENST00000372189 FOXC1Q12948 553 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms