RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 EPHA1P21709 976 aa10.83□□□□□ -0.68
DEPDC1-201ENST00000370966 RRADP55042 308 aa10.83□□□□□ -0.68
DEPDC1-201ENST00000370966 GPR85P60893 370 aa10.83□□□□□ -0.68
DEPDC1-201ENST00000370966 DYRK1AQ13627 763 aa10.83□□□□□ -0.68
DEPDC1-201ENST00000370966 IL10RAQ13651 578 aa10.83□□□□□ -0.68
DEPDC1-201ENST00000370966 VWA2Q5GFL6 755 aa10.83□□□□□ -0.68
DEPDC1-201ENST00000370966 PRAMEF9Q5VWM5 478 aa10.83□□□□□ -0.68
DEPDC1-201ENST00000370966 TMEM215Q68D42 235 aa10.83□□□□□ -0.68
DEPDC1-201ENST00000370966 GRAMD2AQ8IUY3 354 aa10.83□□□□□ -0.68
DEPDC1-201ENST00000370966 MAML2Q8IZL2 1156 aaPredicted RBP10.83□□□□□ -0.68
DEPDC1-201ENST00000370966 KDM8Q8N371 416 aa10.83□□□□□ -0.68
DEPDC1-201ENST00000370966 FAM71E2Q8N5Q1 922 aa10.83□□□□□ -0.68
DEPDC1-201ENST00000370966 SIRT5Q9NXA8 310 aa10.83□□□□□ -0.68
DEPDC1-201ENST00000370966 NEU3Q9UQ49 428 aa10.83□□□□□ -0.68
DEPDC1-201ENST00000370966 TRIP11Q15643 1979 aa10.83□□□□□ -0.68
DEPDC1-201ENST00000370966 DSCR3O14972 297 aa10.83□□□□□ -0.68
DEPDC1-201ENST00000370966 AKR7A3O95154 331 aa10.83□□□□□ -0.68
DEPDC1-201ENST00000370966 LPLP06858 475 aa10.83□□□□□ -0.68
DEPDC1-201ENST00000370966 KRBOX4Q5JUW0 171 aa10.83□□□□□ -0.68
DEPDC1-201ENST00000370966 XAF1Q6GPH4 301 aa10.83□□□□□ -0.68
DEPDC1-201ENST00000370966 TMEM81Q6P7N7 255 aa10.83□□□□□ -0.68
DEPDC1-201ENST00000370966 ZNF813Q6ZN06 617 aa10.83□□□□□ -0.68
DEPDC1-201ENST00000370966 WDR5BQ86VZ2 330 aa10.83□□□□□ -0.68
DEPDC1-201ENST00000370966 BPHLQ86WA6 291 aaPredicted RBP10.83□□□□□ -0.68
DEPDC1-201ENST00000370966 PRR18Q8N4B5 295 aa10.83□□□□□ -0.68
DEPDC1-201ENST00000370966 BBS1Q8NFJ9 593 aa10.83□□□□□ -0.68
DEPDC1-201ENST00000370966 IL1F10Q8WWZ1 152 aa10.83□□□□□ -0.68
DEPDC1-201ENST00000370966 KCND3Q9UK17 655 aa10.83□□□□□ -0.68
DEPDC1-201ENST00000370966 B3GALT5Q9Y2C3 310 aa10.83□□□□□ -0.68
DEPDC1-201ENST00000370966 PLSCR5A0PG75 271 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 TRIM64A6NGJ6 449 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 IFITM5A6NNB3 132 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 ABHD16AO95870 558 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 CD1EP15812 388 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 SMAD4Q13485 552 aaKnown RBP10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 ALKAL2Q6UX46 152 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 DOK3Q7L591 496 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 PRSS45Q7RTY3 260 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 TP53I13Q8NBR0 393 aaPredicted RBP10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 OR5D18Q8NGL1 313 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 GCDHQ92947 438 aaPredicted RBP10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 SEC22AQ96IW7 307 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 COPS3Q9UNS2 423 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 LHX6Q9UPM6 363 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 BOLA1Q9Y3E2 137 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 LMO7DNF2Z398 122 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 SNAPINO95295 136 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 MT-CO2P00403 227 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 GLB1P16278 677 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 IL2RGP31785 369 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 TGFBR1P36897 503 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 DOC2BQ14184 412 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 KCNAB1Q14722 419 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 MSMO1Q15800 293 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 TMPRSS11FQ6ZWK6 438 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 OR52I2Q8NH67 350 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 PAQR8Q8TEZ7 354 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 CCDC74AQ96AQ1 378 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 DCLRE1CQ96SD1 692 aaKnown RBP10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 B3GNT2Q9NY97 397 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 IGHV3-20A0A0C4DH32 117 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 LOC107986453A0A1B0GWG9 222 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 ZNF814B7Z6K7 855 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 AGPAT2O15120 278 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 STK17BO94768 372 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 FGF9P31371 208 aaPredicted RBP10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 CYB561P49447 251 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 MC2RQ01718 297 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 PMPCAQ10713 525 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 SELENBP1Q13228 472 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 STK11Q15831 433 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 KIRREL2Q6UWL6 708 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 GLIPR1L1Q6UWM5 242 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 TDHQ8IZJ6 230 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 PRSS35Q8N3Z0 413 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 ZNF764Q96H86 408 aaPredicted RBP10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 TXNIPQ9H3M7 391 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 LRFN1Q9P244 771 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 TP53TG5Q9Y2B4 290 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 FRG2CA6NGY1 282 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 D6RAR5 112 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 NPIPB8E9PQR5 432 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 NKX2-2O95096 273 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 TGM6O95932 706 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 TNFSF4P23510 183 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 ZNF133P52736 654 aaPredicted RBP10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 PCBP4P57723 403 aaKnown RBP10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 FBXW12Q6X9E4 464 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 ZNF793Q6ZN11 406 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 TSLPQ969D9 159 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 SLIRPQ9GZT3 109 aaKnown RBP10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 PCED1AQ9H1Q7 454 aa10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 UBE2ZQ9H832 354 aaPredicted RBP10.82□□□□□ -0.68
DEPDC1-201ENST00000370966 FER1L6Q2WGJ9 1857 aa10.81□□□□□ -0.68
DEPDC1-201ENST00000370966 TCN2P20062 427 aa10.81□□□□□ -0.68
DEPDC1-201ENST00000370966 RPS18P62269 152 aaKnown RBP10.81□□□□□ -0.68
DEPDC1-201ENST00000370966 BEX5Q5H9J7 111 aa10.81□□□□□ -0.68
DEPDC1-201ENST00000370966 MDGA2Q7Z553 956 aa10.81□□□□□ -0.68
DEPDC1-201ENST00000370966 CNEP1R1Q8N9A8 125 aa10.81□□□□□ -0.68
DEPDC1-201ENST00000370966 OR1J2Q8NGS2 313 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms