RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 TRMT61AQ96FX7 289 aaKnown RBP13.34□□□□□ -0.27
LMO4-201ENST00000370542 SLC38A2Q96QD8 506 aa13.34□□□□□ -0.27
LMO4-201ENST00000370542 TRIB1Q96RU8 372 aa13.34□□□□□ -0.27
LMO4-201ENST00000370542 ZNF607Q96SK3 696 aa13.34□□□□□ -0.27
LMO4-201ENST00000370542 SPATA5L1Q9BVQ7 753 aa13.34□□□□□ -0.27
LMO4-201ENST00000370542 LIME1Q9H400 295 aa13.34□□□□□ -0.27
LMO4-201ENST00000370542 KLRF1Q9NZS2 232 aa13.34□□□□□ -0.27
LMO4-201ENST00000370542 CLCF1Q9UBD9 225 aa13.34□□□□□ -0.27
LMO4-201ENST00000370542 COMMD3Q9UBI1 195 aa13.34□□□□□ -0.27
LMO4-201ENST00000370542 MAB21L2Q9Y586 359 aa13.34□□□□□ -0.27
LMO4-201ENST00000370542 WIF1Q9Y5W5 379 aa13.34□□□□□ -0.27
LMO4-201ENST00000370542 GNG14A0A1W2PPG7 69 aa13.33□□□□□ -0.28
LMO4-201ENST00000370542 A0A1W2PRB8 838 aa13.33□□□□□ -0.28
LMO4-201ENST00000370542 C2orf72A6NCS6 295 aa13.33□□□□□ -0.28
LMO4-201ENST00000370542 FABP7O15540 132 aa13.33□□□□□ -0.28
LMO4-201ENST00000370542 HCRTR2O43614 444 aa13.33□□□□□ -0.28
LMO4-201ENST00000370542 ZIC3O60481 467 aa13.33□□□□□ -0.28
LMO4-201ENST00000370542 OPN1SWP03999 348 aa13.33□□□□□ -0.28
LMO4-201ENST00000370542 ADRA2AP08913 450 aa13.33□□□□□ -0.28
LMO4-201ENST00000370542 RRASP10301 218 aa13.33□□□□□ -0.28
LMO4-201ENST00000370542 DDCP20711 480 aa13.33□□□□□ -0.28
LMO4-201ENST00000370542 MPIP34949 423 aa13.33□□□□□ -0.28
LMO4-201ENST00000370542 LHX2P50458 406 aa13.33□□□□□ -0.28
LMO4-201ENST00000370542 PITPNAQ00169 270 aa13.33□□□□□ -0.28
LMO4-201ENST00000370542 PSG6Q00889 435 aa13.33□□□□□ -0.28
LMO4-201ENST00000370542 FOXD4Q12950 439 aaPredicted RBP13.33□□□□□ -0.28
LMO4-201ENST00000370542 AANATQ16613 207 aa13.33□□□□□ -0.28
LMO4-201ENST00000370542 PRSS53Q2L4Q9 553 aa13.33□□□□□ -0.28
LMO4-201ENST00000370542 FAM71E1Q6IPT2 247 aa13.33□□□□□ -0.28
LMO4-201ENST00000370542 PYHIN1Q6K0P9 492 aa13.33□□□□□ -0.28
LMO4-201ENST00000370542 CDC20BQ86Y33 519 aa13.33□□□□□ -0.28
LMO4-201ENST00000370542 OR8H3Q8N146 312 aa13.33□□□□□ -0.28
LMO4-201ENST00000370542 TCEANCQ8N8B7 351 aa13.33□□□□□ -0.28
LMO4-201ENST00000370542 OR7G2Q8NG99 324 aa13.33□□□□□ -0.28
LMO4-201ENST00000370542 OR52P1PQ8NH57 321 aa13.33□□□□□ -0.28
LMO4-201ENST00000370542 KAT2AQ92830 837 aa13.33□□□□□ -0.28
LMO4-201ENST00000370542 WNT2BQ93097 391 aa13.33□□□□□ -0.28
LMO4-201ENST00000370542 PHF21AQ96BD5 680 aa13.33□□□□□ -0.28
LMO4-201ENST00000370542 MBD6Q96DN6 1003 aa13.33□□□□□ -0.28
LMO4-201ENST00000370542 ZNF582Q96NG8 517 aaPredicted RBP13.33□□□□□ -0.28
LMO4-201ENST00000370542 ERMAPQ96PL5 475 aaPredicted RBP13.33□□□□□ -0.28
LMO4-201ENST00000370542 ADOQ96SZ5 270 aa13.33□□□□□ -0.28
LMO4-201ENST00000370542 SFXN3Q9BWM7 321 aa13.33□□□□□ -0.28
LMO4-201ENST00000370542 HDHD2Q9H0R4 259 aa13.33□□□□□ -0.28
LMO4-201ENST00000370542 PPIL3Q9H2H8 161 aaKnown RBP13.33□□□□□ -0.28
LMO4-201ENST00000370542 ZC4H2Q9NQZ6 224 aa13.33□□□□□ -0.28
LMO4-201ENST00000370542 MED17Q9NVC6 651 aa13.33□□□□□ -0.28
LMO4-201ENST00000370542 SCP2D1Q9UJQ7 156 aa13.33□□□□□ -0.28
LMO4-201ENST00000370542 MGAT4AQ9UM21 535 aa13.33□□□□□ -0.28
LMO4-201ENST00000370542 A0A1W2PRQ8 180 aa13.32□□□□□ -0.28
LMO4-201ENST00000370542 PRAF2O60831 178 aa13.32□□□□□ -0.28
LMO4-201ENST00000370542 REM1O75628 298 aa13.32□□□□□ -0.28
LMO4-201ENST00000370542 POU2F1P14859 743 aa13.32□□□□□ -0.28
LMO4-201ENST00000370542 ZNF708P17019 499 aa13.32□□□□□ -0.28
LMO4-201ENST00000370542 ANXA11P50995 505 aaKnown RBP13.32□□□□□ -0.28
LMO4-201ENST00000370542 CLDN18P56856 261 aa13.32□□□□□ -0.28
LMO4-201ENST00000370542 B3GALT5-AS1P59052 145 aa13.32□□□□□ -0.28
LMO4-201ENST00000370542 SNRPD2P62316 118 aaKnown RBP13.32□□□□□ -0.28
LMO4-201ENST00000370542 EEF1A1P68104 462 aaKnown RBP13.32□□□□□ -0.28
LMO4-201ENST00000370542 CDK5Q00535 292 aa13.32□□□□□ -0.28
LMO4-201ENST00000370542 FOXF2Q12947 444 aa13.32□□□□□ -0.28
LMO4-201ENST00000370542 TOMM20Q15388 145 aa13.32□□□□□ -0.28
LMO4-201ENST00000370542 SYT14P1Q58G82 188 aa13.32□□□□□ -0.28
LMO4-201ENST00000370542 ENTPD8Q5MY95 495 aa13.32□□□□□ -0.28
LMO4-201ENST00000370542 EEF1A1P5Q5VTE0 462 aa13.32□□□□□ -0.28
LMO4-201ENST00000370542 TYW3Q6IPR3 259 aaKnown RBP13.32□□□□□ -0.28
LMO4-201ENST00000370542 PGBD2Q6P3X8 592 aa13.32□□□□□ -0.28
LMO4-201ENST00000370542 UTS2BQ765I0 119 aa13.32□□□□□ -0.28
LMO4-201ENST00000370542 GPAT4Q86UL3 456 aa13.32□□□□□ -0.28
LMO4-201ENST00000370542 TPRA1Q86W33 373 aa13.32□□□□□ -0.28
LMO4-201ENST00000370542 KLHL36Q8N4N3 616 aa13.32□□□□□ -0.28
LMO4-201ENST00000370542 FADS6Q8N9I5 356 aa13.32□□□□□ -0.28
LMO4-201ENST00000370542 EXOSC8Q96B26 276 aaKnown RBP13.32□□□□□ -0.28
LMO4-201ENST00000370542 TM9SF2Q99805 663 aa13.32□□□□□ -0.28
LMO4-201ENST00000370542 CYSLTR2Q9NS75 346 aa13.32□□□□□ -0.28
LMO4-201ENST00000370542 TAS2R10Q9NYW0 307 aa13.32□□□□□ -0.28
LMO4-201ENST00000370542 FBXL2Q9UKC9 423 aa13.32□□□□□ -0.28
LMO4-201ENST00000370542 C19orf53Q9UNZ5 99 aaPredicted RBP13.32□□□□□ -0.28
LMO4-201ENST00000370542 ANKRD61A6NGH8 418 aa13.31□□□□□ -0.28
LMO4-201ENST00000370542 KRBOX1C9JBD0 128 aa13.31□□□□□ -0.28
LMO4-201ENST00000370542 J3KTA2 159 aa13.31□□□□□ -0.28
LMO4-201ENST00000370542 FADS1O60427 444 aa13.31□□□□□ -0.28
LMO4-201ENST00000370542 HPGDSO60760 199 aa13.31□□□□□ -0.28
LMO4-201ENST00000370542 TMEM127O75204 238 aa13.31□□□□□ -0.28
LMO4-201ENST00000370542 NME6O75414 186 aaPredicted RBP13.31□□□□□ -0.28
LMO4-201ENST00000370542 C6orf47O95873 294 aa13.31□□□□□ -0.28
LMO4-201ENST00000370542 CLEC2LP0C7M8 214 aa13.31□□□□□ -0.28
LMO4-201ENST00000370542 TMIGD3P0DMS9 266 aaPredicted RBP13.31□□□□□ -0.28
LMO4-201ENST00000370542 ZP3P21754 424 aa13.31□□□□□ -0.28
LMO4-201ENST00000370542 ETV1P50549 477 aa13.31□□□□□ -0.28
LMO4-201ENST00000370542 RNF144AP50876 292 aaPredicted RBP13.31□□□□□ -0.28
LMO4-201ENST00000370542 GBX2P52951 348 aaPredicted RBP13.31□□□□□ -0.28
LMO4-201ENST00000370542 RPS25P62851 125 aaKnown RBP13.31□□□□□ -0.28
LMO4-201ENST00000370542 HBA1P69905 142 aa13.31□□□□□ -0.28
LMO4-201ENST00000370542 C2orf80Q0P641 193 aa13.31□□□□□ -0.28
LMO4-201ENST00000370542 CYP27C1Q4G0S4 372 aa13.31□□□□□ -0.28
LMO4-201ENST00000370542 PLEKHM3Q6ZWE6 761 aa13.31□□□□□ -0.28
LMO4-201ENST00000370542 OR2L13Q8N349 312 aa13.31□□□□□ -0.28
LMO4-201ENST00000370542 OR4M2Q8NGB6 313 aa13.31□□□□□ -0.28
LMO4-201ENST00000370542 OR4N2Q8NGD1 307 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms