RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 ETFDHQ16134 617 aa13.13□□□□□ -0.31
SMPDL3A-201ENST00000368440 CLEC12AQ5QGZ9 265 aa13.13□□□□□ -0.31
SMPDL3A-201ENST00000368440 GPR139Q6DWJ6 353 aa13.13□□□□□ -0.31
SMPDL3A-201ENST00000368440 TMEM108Q6UXF1 575 aa13.13□□□□□ -0.31
SMPDL3A-201ENST00000368440 RASSF6Q6ZTQ3 369 aa13.13□□□□□ -0.31
SMPDL3A-201ENST00000368440 PIAS4Q8N2W9 510 aaPredicted RBP13.13□□□□□ -0.31
SMPDL3A-201ENST00000368440 CYGBQ8WWM9 190 aa13.13□□□□□ -0.31
SMPDL3A-201ENST00000368440 AKAP1Q92667 903 aaKnown RBP eCLIP13.13□□□□□ -0.31
SMPDL3A-201ENST00000368440 NABP1Q96AH0 204 aa13.13□□□□□ -0.31
SMPDL3A-201ENST00000368440 IFT27Q9BW83 186 aa13.13□□□□□ -0.31
SMPDL3A-201ENST00000368440 CRNNQ9UBG3 495 aaPredicted RBP13.13□□□□□ -0.31
SMPDL3A-201ENST00000368440 ST6GALNAC2Q9UJ37 374 aa13.13□□□□□ -0.31
SMPDL3A-201ENST00000368440 MGAT4BQ9UQ53 548 aa13.13□□□□□ -0.31
SMPDL3A-201ENST00000368440 PLEKHA6Q9Y2H5 1048 aa13.13□□□□□ -0.31
SMPDL3A-201ENST00000368440 PRSS37A4D1T9 235 aa13.12□□□□□ -0.31
SMPDL3A-201ENST00000368440 XKRYO14609 159 aa13.12□□□□□ -0.31
SMPDL3A-201ENST00000368440 SNAP29O95721 258 aa13.12□□□□□ -0.31
SMPDL3A-201ENST00000368440 IGKV3-15P01624 115 aa13.12□□□□□ -0.31
SMPDL3A-201ENST00000368440 CD79AP11912 226 aa13.12□□□□□ -0.31
SMPDL3A-201ENST00000368440 CDKN2AP42771 156 aaKnown RBP13.12□□□□□ -0.31
SMPDL3A-201ENST00000368440 RPS6KA3P51812 740 aa13.12□□□□□ -0.31
SMPDL3A-201ENST00000368440 ARHGDIAP52565 204 aa13.12□□□□□ -0.31
SMPDL3A-201ENST00000368440 DAG1Q14118 895 aa13.12□□□□□ -0.31
SMPDL3A-201ENST00000368440 THEM4Q5T1C6 240 aa13.12□□□□□ -0.31
SMPDL3A-201ENST00000368440 PAMR1Q6UXH9 720 aa13.12□□□□□ -0.31
SMPDL3A-201ENST00000368440 SVOPLQ8N434 492 aa13.12□□□□□ -0.31
SMPDL3A-201ENST00000368440 PACRGLQ8N7B6 248 aa13.12□□□□□ -0.31
SMPDL3A-201ENST00000368440 SLC38A2Q96QD8 506 aa13.12□□□□□ -0.31
SMPDL3A-201ENST00000368440 RBP7Q96R05 134 aa13.12□□□□□ -0.31
SMPDL3A-201ENST00000368440 IL20Q9NYY1 176 aa13.12□□□□□ -0.31
SMPDL3A-201ENST00000368440 NOTCH2Q04721 2471 aa13.12□□□□□ -0.31
SMPDL3A-201ENST00000368440 CADP27708 2225 aa13.12□□□□□ -0.31
SMPDL3A-201ENST00000368440 ARRDC5A6NEK1 342 aa13.12□□□□□ -0.31
SMPDL3A-201ENST00000368440 IGLV1-44P01699 117 aa13.12□□□□□ -0.31
SMPDL3A-201ENST00000368440 CECR9P0C854 216 aa13.12□□□□□ -0.31
SMPDL3A-201ENST00000368440 OR8G3PP0DMU2 310 aa13.12□□□□□ -0.31
SMPDL3A-201ENST00000368440 APEHP13798 732 aaKnown RBP13.12□□□□□ -0.31
SMPDL3A-201ENST00000368440 CBR1P16152 277 aa13.12□□□□□ -0.31
SMPDL3A-201ENST00000368440 CTLA4P16410 223 aa13.12□□□□□ -0.31
SMPDL3A-201ENST00000368440 HSPA13P48723 471 aa13.12□□□□□ -0.31
SMPDL3A-201ENST00000368440 IDH3GP51553 393 aaPredicted RBP13.12□□□□□ -0.31
SMPDL3A-201ENST00000368440 NPRL3Q12980 569 aa13.12□□□□□ -0.31
SMPDL3A-201ENST00000368440 C1QTNF12Q5T7M4 302 aa13.12□□□□□ -0.31
SMPDL3A-201ENST00000368440 SHQ1Q6PI26 577 aaKnown RBP13.12□□□□□ -0.31
SMPDL3A-201ENST00000368440 B3GLCTQ6Y288 498 aa13.12□□□□□ -0.31
SMPDL3A-201ENST00000368440 HIPK1Q86Z02 1210 aa13.12□□□□□ -0.31
SMPDL3A-201ENST00000368440 ZNF75AQ96N20 296 aa13.12□□□□□ -0.31
SMPDL3A-201ENST00000368440 FOXN4Q96NZ1 517 aa13.12□□□□□ -0.31
SMPDL3A-201ENST00000368440 SYT4Q9H2B2 425 aa13.12□□□□□ -0.31
SMPDL3A-201ENST00000368440 MAST4O15021 2626 aa13.12□□□□□ -0.31
SMPDL3A-201ENST00000368440 AKAP6Q13023 2319 aa13.11□□□□□ -0.31
SMPDL3A-201ENST00000368440 DLGAP1O14490 977 aa13.11□□□□□ -0.31
SMPDL3A-201ENST00000368440 BHLHE40O14503 412 aa13.11□□□□□ -0.31
SMPDL3A-201ENST00000368440 HS3ST1O14792 307 aa13.11□□□□□ -0.31
SMPDL3A-201ENST00000368440 ARPC3O15145 178 aa13.11□□□□□ -0.31
SMPDL3A-201ENST00000368440 SCG5P05408 212 aa13.11□□□□□ -0.31
SMPDL3A-201ENST00000368440 NR2C1P13056 603 aa13.11□□□□□ -0.31
SMPDL3A-201ENST00000368440 HIST1H1CP16403 213 aaKnown RBP13.11□□□□□ -0.31
SMPDL3A-201ENST00000368440 ALDH3A2P51648 485 aa13.11□□□□□ -0.31
SMPDL3A-201ENST00000368440 MRPS34P82930 218 aaKnown RBP13.11□□□□□ -0.31
SMPDL3A-201ENST00000368440 MED21Q13503 144 aa13.11□□□□□ -0.31
SMPDL3A-201ENST00000368440 GSG1Q2KHT4 349 aa13.11□□□□□ -0.31
SMPDL3A-201ENST00000368440 ZNF672Q499Z4 452 aaPredicted RBP13.11□□□□□ -0.31
SMPDL3A-201ENST00000368440 CCDC36Q8IYA8 594 aa13.11□□□□□ -0.31
SMPDL3A-201ENST00000368440 LRRC18Q8N456 261 aa13.11□□□□□ -0.31
SMPDL3A-201ENST00000368440 OR4K13Q8NH42 304 aa13.11□□□□□ -0.31
SMPDL3A-201ENST00000368440 MS4A3Q96HJ5 214 aa13.11□□□□□ -0.31
SMPDL3A-201ENST00000368440 Q9H521 79 aa13.11□□□□□ -0.31
SMPDL3A-201ENST00000368440 TBC1D23Q9NUY8 699 aa13.11□□□□□ -0.31
SMPDL3A-201ENST00000368440 SMPD3Q9NY59 655 aaPredicted RBP13.11□□□□□ -0.31
SMPDL3A-201ENST00000368440 VSX1Q9NZR4 365 aaPredicted RBP13.11□□□□□ -0.31
SMPDL3A-201ENST00000368440 KIF17Q9P2E2 1029 aa13.11□□□□□ -0.31
SMPDL3A-201ENST00000368440 REV1Q9UBZ9 1251 aa13.11□□□□□ -0.31
SMPDL3A-201ENST00000368440 RAB26Q9ULW5 256 aa13.11□□□□□ -0.31
SMPDL3A-201ENST00000368440 MOKQ9UQ07 419 aa13.11□□□□□ -0.31
SMPDL3A-201ENST00000368440 HEATR1Q9H583 2144 aaKnown RBP13.11□□□□□ -0.31
SMPDL3A-201ENST00000368440 A0A1W2PPL8 197 aa13.1□□□□□ -0.31
SMPDL3A-201ENST00000368440 ATP6V1G2-DDX39BF2Z307 99 aa13.1□□□□□ -0.31
SMPDL3A-201ENST00000368440 ATE1O95260 518 aa13.1□□□□□ -0.31
SMPDL3A-201ENST00000368440 ALPLP05186 524 aa13.1□□□□□ -0.31
SMPDL3A-201ENST00000368440 GSTM3P21266 225 aa13.1□□□□□ -0.31
SMPDL3A-201ENST00000368440 CALCRP30988 508 aa13.1□□□□□ -0.31
SMPDL3A-201ENST00000368440 GIPRP48546 466 aa13.1□□□□□ -0.31
SMPDL3A-201ENST00000368440 CDH11P55287 796 aa13.1□□□□□ -0.31
SMPDL3A-201ENST00000368440 RAB1AP62820 205 aa13.1□□□□□ -0.31
SMPDL3A-201ENST00000368440 SLC35F1Q5T1Q4 408 aa13.1□□□□□ -0.31
SMPDL3A-201ENST00000368440 OTPQ5XKR4 325 aa13.1□□□□□ -0.31
SMPDL3A-201ENST00000368440 RPL13AP3Q6NVV1 102 aa13.1□□□□□ -0.31
SMPDL3A-201ENST00000368440 LEG1Q6P5S2 330 aa13.1□□□□□ -0.31
SMPDL3A-201ENST00000368440 SLC22A25Q6T423 547 aa13.1□□□□□ -0.31
SMPDL3A-201ENST00000368440 CD300LDQ6UXZ3 194 aa13.1□□□□□ -0.31
SMPDL3A-201ENST00000368440 FOXL2NBQ6ZUU3 175 aa13.1□□□□□ -0.31
SMPDL3A-201ENST00000368440 ADCK1Q86TW2 530 aa13.1□□□□□ -0.31
SMPDL3A-201ENST00000368440 SDR9C7Q8NEX9 313 aa13.1□□□□□ -0.31
SMPDL3A-201ENST00000368440 OR52L1Q8NGH7 329 aa13.1□□□□□ -0.31
SMPDL3A-201ENST00000368440 OR4Q3Q8NH05 313 aa13.1□□□□□ -0.31
SMPDL3A-201ENST00000368440 FNDC8Q8TC99 324 aa13.1□□□□□ -0.31
SMPDL3A-201ENST00000368440 TSSK2Q96PF2 358 aa13.1□□□□□ -0.31
SMPDL3A-201ENST00000368440 NMNAT3Q96T66 252 aa13.1□□□□□ -0.31
SMPDL3A-201ENST00000368440 TSSK6Q9BXA6 273 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms