RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 PIWIL3Q7Z3Z3 882 aaKnown RBP7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 LCA5Q86VQ0 697 aa7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 COMTD1Q86VU5 262 aa7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 C10orf107Q8IVU9 208 aa7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 MUC20Q8N307 709 aaPredicted RBP7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 C17orf53Q8N3J3 647 aaPredicted RBP7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 FITM2Q8N6M3 262 aa7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 SLC25A40Q8TBP6 338 aa7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 AGR3Q8TD06 166 aa7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 KLF14Q8TD94 323 aaPredicted RBP7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 C10orf82Q8WW14 230 aa7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 SSMEM1Q8WWF3 244 aa7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 SGCDQ92629 289 aa7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 TMEM54Q969K7 222 aa7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 PPP1R14AQ96A00 147 aa7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 CCDC126Q96EE4 140 aa7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 SLC47A1Q96FL8 570 aa7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 SLC41A3Q96GZ6 507 aa7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 DMRTB1Q96MA1 342 aa7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 TBX15Q96SF7 602 aa7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 OR2J1Q9GZK6 312 aa7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 MTHFD2LQ9H903 347 aaPredicted RBP7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 TMEM38BQ9NVV0 291 aa7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 KLHL14Q9P2G3 628 aa7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 MARCOQ9UEW3 520 aaPredicted RBP7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 IL20RAQ9UHF4 553 aa7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 FOXJ3Q9UPW0 622 aa7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 A0A087WUJ7 227 aa7.03□□□□□ -1.28
HMGB1P39-201ENST00000366304 A0A0U1RQK1 487 aa7.03□□□□□ -1.28
HMGB1P39-201ENST00000366304 NPHS1O60500 1241 aa7.03□□□□□ -1.28
HMGB1P39-201ENST00000366304 TSPAN9O75954 239 aa7.03□□□□□ -1.28
HMGB1P39-201ENST00000366304 DBIP07108 87 aaKnown RBP7.03□□□□□ -1.28
HMGB1P39-201ENST00000366304 FGF4P08620 206 aa7.03□□□□□ -1.28
HMGB1P39-201ENST00000366304 MMP9P14780 707 aa7.03□□□□□ -1.28
HMGB1P39-201ENST00000366304 FUT4P22083 530 aa7.03□□□□□ -1.28
HMGB1P39-201ENST00000366304 CLDN8P56748 225 aa7.03□□□□□ -1.28
HMGB1P39-201ENST00000366304 RPL15P61313 204 aaKnown RBP7.03□□□□□ -1.28
HMGB1P39-201ENST00000366304 TNFAIP6P98066 277 aaPredicted RBP7.03□□□□□ -1.28
HMGB1P39-201ENST00000366304 HOXA4Q00056 320 aaPredicted RBP7.03□□□□□ -1.28
HMGB1P39-201ENST00000366304 CDK5R2Q13319 367 aa7.03□□□□□ -1.28
HMGB1P39-201ENST00000366304 RPS26P11Q5JNZ5 115 aaPredicted RBP7.03□□□□□ -1.28
HMGB1P39-201ENST00000366304 FAM201AQ5SY85 155 aa7.03□□□□□ -1.28
HMGB1P39-201ENST00000366304 MBNL2Q5VZF2 373 aaKnown RBP7.03□□□□□ -1.28
HMGB1P39-201ENST00000366304 BTNL3Q6UXE8 466 aa7.03□□□□□ -1.28
HMGB1P39-201ENST00000366304 KLBQ86Z14 1044 aa7.03□□□□□ -1.28
HMGB1P39-201ENST00000366304 UEVLDQ8IX04 471 aa7.03□□□□□ -1.28
HMGB1P39-201ENST00000366304 ZNF440Q8IYI8 595 aa7.03□□□□□ -1.28
HMGB1P39-201ENST00000366304 NATD1Q8N6N6 113 aa7.03□□□□□ -1.28
HMGB1P39-201ENST00000366304 OR4K5Q8NGD3 323 aa7.03□□□□□ -1.28
HMGB1P39-201ENST00000366304 OR6N1Q8NGY5 312 aa7.03□□□□□ -1.28
HMGB1P39-201ENST00000366304 OR52P1PQ8NH57 321 aa7.03□□□□□ -1.28
HMGB1P39-201ENST00000366304 CFHR4Q92496 578 aa7.03□□□□□ -1.28
HMGB1P39-201ENST00000366304 FAM71F1Q96KD3 344 aaPredicted RBP7.03□□□□□ -1.28
HMGB1P39-201ENST00000366304 PPP3R2Q96LZ3 170 aa7.03□□□□□ -1.28
HMGB1P39-201ENST00000366304 MOGAT1Q96PD6 335 aa7.03□□□□□ -1.28
HMGB1P39-201ENST00000366304 NUDT16L1Q9BRJ7 211 aaKnown RBP7.03□□□□□ -1.28
HMGB1P39-201ENST00000366304 SLC35A5Q9BS91 424 aa7.03□□□□□ -1.28
HMGB1P39-201ENST00000366304 BCL2L14Q9BZR8 327 aa7.03□□□□□ -1.28
HMGB1P39-201ENST00000366304 DPY30Q9C005 99 aa7.03□□□□□ -1.28
HMGB1P39-201ENST00000366304 EGLN1Q9GZT9 426 aa7.03□□□□□ -1.28
HMGB1P39-201ENST00000366304 POFUT1Q9H488 388 aa7.03□□□□□ -1.28
HMGB1P39-201ENST00000366304 TMEM165Q9HC07 324 aa7.03□□□□□ -1.28
HMGB1P39-201ENST00000366304 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.03□□□□□ -1.28
HMGB1P39-201ENST00000366304 FBXL3Q9UKT7 428 aa7.03□□□□□ -1.28
HMGB1P39-201ENST00000366304 LRCH1Q9Y2L9 728 aa7.03□□□□□ -1.28
HMGB1P39-201ENST00000366304 GPR45Q9Y5Y3 372 aa7.03□□□□□ -1.28
HMGB1P39-201ENST00000366304 TET2Q6N021 2002 aaPredicted RBP7.03□□□□□ -1.28
HMGB1P39-201ENST00000366304 HYDINQ4G0P3 5121 aa7.03□□□□□ -1.28
HMGB1P39-201ENST00000366304 A0A087WUV0 522 aaPredicted RBP7.02□□□□□ -1.29
HMGB1P39-201ENST00000366304 A0A096LPI6 279 aa7.02□□□□□ -1.29
HMGB1P39-201ENST00000366304 EXOC1LA0A1B0GW35 172 aa7.02□□□□□ -1.29
HMGB1P39-201ENST00000366304 WI2-2373I1.2A0A1W2PRP0 233 aa7.02□□□□□ -1.29
HMGB1P39-201ENST00000366304 MEGF11A6BM72 1044 aa7.02□□□□□ -1.29
HMGB1P39-201ENST00000366304 H0YHG0 523 aa7.02□□□□□ -1.29
HMGB1P39-201ENST00000366304 TMEM178BH3BS89 294 aa7.02□□□□□ -1.29
HMGB1P39-201ENST00000366304 MGRN1O60291 552 aa7.02□□□□□ -1.29
HMGB1P39-201ENST00000366304 BGLAPP02818 100 aa7.02□□□□□ -1.29
HMGB1P39-201ENST00000366304 UQCRBP14927 111 aa7.02□□□□□ -1.29
HMGB1P39-201ENST00000366304 CPA3P15088 417 aa7.02□□□□□ -1.29
HMGB1P39-201ENST00000366304 NCF2P19878 526 aaPredicted RBP7.02□□□□□ -1.29
HMGB1P39-201ENST00000366304 HTR2AP28223 471 aa7.02□□□□□ -1.29
HMGB1P39-201ENST00000366304 MAPK1P28482 360 aa7.02□□□□□ -1.29
HMGB1P39-201ENST00000366304 CFHR2P36980 270 aa7.02□□□□□ -1.29
HMGB1P39-201ENST00000366304 MDH2P40926 338 aaKnown RBP7.02□□□□□ -1.29
HMGB1P39-201ENST00000366304 CDKN2CP42773 168 aa7.02□□□□□ -1.29
HMGB1P39-201ENST00000366304 CSNK1A1P48729 337 aa7.02□□□□□ -1.29
HMGB1P39-201ENST00000366304 BIDP55957 195 aa7.02□□□□□ -1.29
HMGB1P39-201ENST00000366304 KRTAP10-11P60412 298 aa7.02□□□□□ -1.29
HMGB1P39-201ENST00000366304 HPCAP84074 193 aa7.02□□□□□ -1.29
HMGB1P39-201ENST00000366304 CASP8Q14790 479 aa7.02□□□□□ -1.29
HMGB1P39-201ENST00000366304 PCLAFQ15004 111 aa7.02□□□□□ -1.29
HMGB1P39-201ENST00000366304 HERPUD1Q15011 391 aa7.02□□□□□ -1.29
HMGB1P39-201ENST00000366304 TBC1D28Q2M2D7 210 aa7.02□□□□□ -1.29
HMGB1P39-201ENST00000366304 RUNDC3AQ59EK9 446 aa7.02□□□□□ -1.29
HMGB1P39-201ENST00000366304 FAM69AQ5T7M9 428 aa7.02□□□□□ -1.29
HMGB1P39-201ENST00000366304 GPR157Q5UAW9 335 aa7.02□□□□□ -1.29
HMGB1P39-201ENST00000366304 LYPD2Q6UXB3 125 aa7.02□□□□□ -1.29
HMGB1P39-201ENST00000366304 ZNF841Q6ZN19 808 aa7.02□□□□□ -1.29
HMGB1P39-201ENST00000366304 LDLRAD3Q86YD5 345 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms