RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 PABPC4LP0CB38 370 aaKnown RBP6.87□□□□□ -1.31
YBX3-204ENST00000366290 HSD17B1P14061 328 aa6.87□□□□□ -1.31
YBX3-204ENST00000366290 ZNF17P17021 662 aa6.87□□□□□ -1.31
YBX3-204ENST00000366290 SSTR2P30874 369 aa6.87□□□□□ -1.31
YBX3-204ENST00000366290 CDAP32320 146 aa6.87□□□□□ -1.31
YBX3-204ENST00000366290 PEX19P40855 299 aa6.87□□□□□ -1.31
YBX3-204ENST00000366290 PCYT1AP49585 367 aa6.87□□□□□ -1.31
YBX3-204ENST00000366290 MNAT1P51948 309 aa6.87□□□□□ -1.31
YBX3-204ENST00000366290 ZNF136P52737 540 aa6.87□□□□□ -1.31
YBX3-204ENST00000366290 CLDN15P56746 228 aa6.87□□□□□ -1.31
YBX3-204ENST00000366290 SELENOVP59797 346 aa6.87□□□□□ -1.31
YBX3-204ENST00000366290 KRTAP10-9P60411 292 aa6.87□□□□□ -1.31
YBX3-204ENST00000366290 NCALDP61601 193 aa6.87□□□□□ -1.31
YBX3-204ENST00000366290 HPCAP84074 193 aa6.87□□□□□ -1.31
YBX3-204ENST00000366290 ZNF117Q03924 483 aa6.87□□□□□ -1.31
YBX3-204ENST00000366290 SKP2Q13309 424 aa6.87□□□□□ -1.31
YBX3-204ENST00000366290 VEZF1Q14119 521 aa6.87□□□□□ -1.31
YBX3-204ENST00000366290 GNA13Q14344 377 aa6.87□□□□□ -1.31
YBX3-204ENST00000366290 TOMM20Q15388 145 aa6.87□□□□□ -1.31
YBX3-204ENST00000366290 GLIPR1L2Q4G1C9 344 aa6.87□□□□□ -1.31
YBX3-204ENST00000366290 MRPL2Q5T653 305 aaKnown RBP6.87□□□□□ -1.31
YBX3-204ENST00000366290 ERICH5Q6P6B1 374 aa6.87□□□□□ -1.31
YBX3-204ENST00000366290 CLIP4Q8N3C7 705 aa6.87□□□□□ -1.31
YBX3-204ENST00000366290 GTPBP8Q8N3Z3 284 aaPredicted RBP6.87□□□□□ -1.31
YBX3-204ENST00000366290 ZNF614Q8N883 585 aa6.87□□□□□ -1.31
YBX3-204ENST00000366290 OR2T12Q8NG77 320 aa6.87□□□□□ -1.31
YBX3-204ENST00000366290 OR4K17Q8NGC6 315 aa6.87□□□□□ -1.31
YBX3-204ENST00000366290 OR10Q1Q8NGQ4 319 aa6.87□□□□□ -1.31
YBX3-204ENST00000366290 OR52P1PQ8NH57 321 aa6.87□□□□□ -1.31
YBX3-204ENST00000366290 SFXN2Q96NB2 322 aa6.87□□□□□ -1.31
YBX3-204ENST00000366290 TUBA1CQ9BQE3 449 aa6.87□□□□□ -1.31
YBX3-204ENST00000366290 PIGQQ9BRB3 760 aa6.87□□□□□ -1.31
YBX3-204ENST00000366290 UCK2Q9BZX2 261 aa6.87□□□□□ -1.31
YBX3-204ENST00000366290 ADA2Q9NZK5 511 aa6.87□□□□□ -1.31
YBX3-204ENST00000366290 MED11Q9P086 117 aa6.87□□□□□ -1.31
YBX3-204ENST00000366290 DKKL1Q9UK85 242 aa6.87□□□□□ -1.31
YBX3-204ENST00000366290 ICAM5Q9UMF0 924 aa6.87□□□□□ -1.31
YBX3-204ENST00000366290 ANGPT4Q9Y264 503 aa6.87□□□□□ -1.31
YBX3-204ENST00000366290 ZNF443Q9Y2A4 671 aaPredicted RBP6.87□□□□□ -1.31
YBX3-204ENST00000366290 AP4B1Q9Y6B7 739 aa6.87□□□□□ -1.31
YBX3-204ENST00000366290 HRNRQ86YZ3 2850 aaPredicted RBP6.87□□□□□ -1.31
YBX3-204ENST00000366290 IGLV5-39A0A0G2JS06 123 aa6.86□□□□□ -1.31
YBX3-204ENST00000366290 OR2M5A3KFT3 312 aa6.86□□□□□ -1.31
YBX3-204ENST00000366290 C5orf58C9J3I9 102 aa6.86□□□□□ -1.31
YBX3-204ENST00000366290 ZNF264O43296 627 aa6.86□□□□□ -1.31
YBX3-204ENST00000366290 SEC14L5O43304 696 aa6.86□□□□□ -1.31
YBX3-204ENST00000366290 RCBTB2O95199 551 aa6.86□□□□□ -1.31
YBX3-204ENST00000366290 CSTAP01040 98 aa6.86□□□□□ -1.31
YBX3-204ENST00000366290 OPN1SWP03999 348 aa6.86□□□□□ -1.31
YBX3-204ENST00000366290 CRHP06850 196 aa6.86□□□□□ -1.31
YBX3-204ENST00000366290 HOXB5P09067 269 aa6.86□□□□□ -1.31
YBX3-204ENST00000366290 NCK1P16333 377 aa6.86□□□□□ -1.31
YBX3-204ENST00000366290 GGT1P19440 569 aa6.86□□□□□ -1.31
YBX3-204ENST00000366290 TNFRSF1BP20333 461 aa6.86□□□□□ -1.31
YBX3-204ENST00000366290 OPRM1P35372 400 aa6.86□□□□□ -1.31
YBX3-204ENST00000366290 ACAA2P42765 397 aaKnown RBP6.86□□□□□ -1.31
YBX3-204ENST00000366290 STARP49675 285 aa6.86□□□□□ -1.31
YBX3-204ENST00000366290 RASSF2P50749 326 aa6.86□□□□□ -1.31
YBX3-204ENST00000366290 RIPPLY3P57055 190 aa6.86□□□□□ -1.31
YBX3-204ENST00000366290 KCNJ10P78508 379 aa6.86□□□□□ -1.31
YBX3-204ENST00000366290 TOMM34Q15785 309 aaPredicted RBP6.86□□□□□ -1.31
YBX3-204ENST00000366290 DUSP7Q16829 419 aa6.86□□□□□ -1.31
YBX3-204ENST00000366290 LIN52Q52LA3 116 aa6.86□□□□□ -1.31
YBX3-204ENST00000366290 SAMD4BQ5PRF9 694 aaKnown RBP6.86□□□□□ -1.31
YBX3-204ENST00000366290 EEF1A1P5Q5VTE0 462 aa6.86□□□□□ -1.31
YBX3-204ENST00000366290 DHRS4L2Q6PKH6 230 aa6.86□□□□□ -1.31
YBX3-204ENST00000366290 ARSKQ6UWY0 536 aa6.86□□□□□ -1.31
YBX3-204ENST00000366290 MEX3BQ6ZN04 569 aaKnown RBP6.86□□□□□ -1.31
YBX3-204ENST00000366290 NOXA1Q86UR1 476 aa6.86□□□□□ -1.31
YBX3-204ENST00000366290 GRAMD2AQ8IUY3 354 aa6.86□□□□□ -1.31
YBX3-204ENST00000366290 SLC30A8Q8IWU4 369 aa6.86□□□□□ -1.31
YBX3-204ENST00000366290 PEX5LQ8IYB4 626 aa6.86□□□□□ -1.31
YBX3-204ENST00000366290 PARP16Q8N5Y8 322 aa6.86□□□□□ -1.31
YBX3-204ENST00000366290 C9orf106Q8NAJ2 232 aa6.86□□□□□ -1.31
YBX3-204ENST00000366290 SMYD1Q8NB12 490 aa6.86□□□□□ -1.31
YBX3-204ENST00000366290 RELL2Q8NC24 303 aaPredicted RBP6.86□□□□□ -1.31
YBX3-204ENST00000366290 OR4D11Q8NGI4 311 aa6.86□□□□□ -1.31
YBX3-204ENST00000366290 SNAPC3Q92966 411 aa6.86□□□□□ -1.31
YBX3-204ENST00000366290 SH3YL1Q96HL8 342 aaPredicted RBP6.86□□□□□ -1.31
YBX3-204ENST00000366290 LURAP1Q96LR2 239 aa6.86□□□□□ -1.31
YBX3-204ENST00000366290 KCTD14Q9BQ13 255 aaPredicted RBP6.86□□□□□ -1.31
YBX3-204ENST00000366290 SFXN3Q9BWM7 321 aa6.86□□□□□ -1.31
YBX3-204ENST00000366290 LAT2Q9GZY6 243 aa6.86□□□□□ -1.31
YBX3-204ENST00000366290 NDE1Q9NXR1 346 aa6.86□□□□□ -1.31
YBX3-204ENST00000366290 KCNN3Q9UGI6 736 aa6.86□□□□□ -1.31
YBX3-204ENST00000366290 SLC35A3Q9Y2D2 325 aa6.86□□□□□ -1.31
YBX3-204ENST00000366290 ZNF337Q9Y3M9 751 aa6.86□□□□□ -1.31
YBX3-204ENST00000366290 ADAM18Q9Y3Q7 739 aa6.86□□□□□ -1.31
YBX3-204ENST00000366290 ZNF175Q9Y473 711 aa6.86□□□□□ -1.31
YBX3-204ENST00000366290 LSM4Q9Y4Z0 139 aaKnown RBP6.86□□□□□ -1.31
YBX3-204ENST00000366290 LYVE1Q9Y5Y7 322 aa6.86□□□□□ -1.31
YBX3-204ENST00000366290 DNAJC9-AS1A6NH13 148 aa6.85□□□□□ -1.31
YBX3-204ENST00000366290 GTPBP1O00178 669 aaKnown RBP6.85□□□□□ -1.31
YBX3-204ENST00000366290 CXCR6O00574 342 aa6.85□□□□□ -1.31
YBX3-204ENST00000366290 AP3D1O14617 1153 aa6.85□□□□□ -1.31
YBX3-204ENST00000366290 ADAMDEC1O15204 470 aa6.85□□□□□ -1.31
YBX3-204ENST00000366290 GMFGO60234 142 aa6.85□□□□□ -1.31
YBX3-204ENST00000366290 EIF4E2O60573 245 aaKnown RBP6.85□□□□□ -1.31
YBX3-204ENST00000366290 TPST2O60704 377 aa6.85□□□□□ -1.31
YBX3-204ENST00000366290 PDE5AO76074 875 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms