RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 MYH2Q9UKX2 1941 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 C20orf202A1L168 122 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 ZNF705FA8MVS1 300 aaPredicted RBP10.04□□□□□ -0.8
CLIP1-203ENST00000361654 PRRT4C9JH25 899 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 H3BMQ9 156 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 K7EQS6 105 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 LINC01565O15544 149 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 NDUFB3O43676 98 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 ZNF254O75437 659 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 CHRM2P08172 466 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 QDPRP09417 244 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 ZNF705DP0CH99 300 aaPredicted RBP10.04□□□□□ -0.8
CLIP1-203ENST00000361654 ZNF705BP0CI00 300 aaPredicted RBP10.04□□□□□ -0.8
CLIP1-203ENST00000361654 GPR12P47775 334 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 FOXK2Q01167 660 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 ALKBH1Q13686 389 aaKnown RBP10.04□□□□□ -0.8
CLIP1-203ENST00000361654 IL11RAQ14626 422 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 THEM4Q5T1C6 240 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 NXNL2Q5VZ03 156 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 ANKRD13BQ86YJ7 626 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 C15orf54Q8N8G6 183 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 DTWD2Q8NBA8 298 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 OXGR1Q96P68 337 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 OR2A14Q96R47 310 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 MYH7P12883 1935 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 CLDN24A6NM45 220 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 FAM90A27PA6NNH2 459 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 C1orf196B1AJZ1 125 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 LCMT2O60294 686 aaKnown RBP10.04□□□□□ -0.8
CLIP1-203ENST00000361654 CAPNS1P04632 268 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 CHRNB1P11230 501 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 NID1P14543 1247 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 SERPINF1P36955 418 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 RPS16P62249 146 aaKnown RBP10.04□□□□□ -0.8
CLIP1-203ENST00000361654 FAM53BQ14153 422 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 PGBD5Q8N414 524 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 CLDN22Q8N7P3 220 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 OR2B2Q9GZK3 357 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 R3HDMLQ9H3Y0 253 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 HES4Q9HCC6 221 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 SNX11Q9Y5W9 270 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 NUDT19A8MXV4 375 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 M0R082 166 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 DHRS4L1P0CG22 281 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 ST6GAL1P15907 406 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 OR1C1Q15619 314 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 ZNF767PQ75MW2 155 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 TSEN54Q7Z6J9 526 aaKnown RBP10.04□□□□□ -0.8
CLIP1-203ENST00000361654 ZFP82Q8N141 532 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 FBXL6Q8N531 539 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 OR2V1Q8NHB1 315 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 LKAAEAR1Q8TD35 194 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.04□□□□□ -0.8
CLIP1-203ENST00000361654 C5orf49A4QMS7 147 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 SPDEFO95238 335 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 LIPCP11150 499 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 AADACP22760 399 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 FPR3P25089 353 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 PAX6P26367 422 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 PNLIPRP2P54317 469 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 ERHP84090 104 aaKnown RBP10.04□□□□□ -0.8
CLIP1-203ENST00000361654 TFAP2EQ6VUC0 442 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 WBP2Q969T9 261 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 AKR1E2Q96JD6 320 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 TPPP3Q9BW30 176 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 COMMD5Q9GZQ3 224 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 RNF32Q9H0A6 362 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 ARV1Q9H2C2 271 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 ESRP2Q9H6T0 727 aaKnown RBP10.04□□□□□ -0.8
CLIP1-203ENST00000361654 CXorf36Q9H7Y0 433 aa10.04□□□□□ -0.8
CLIP1-203ENST00000361654 COA3Q9Y2R0 106 aaPredicted RBP10.04□□□□□ -0.8
CLIP1-203ENST00000361654 GJB3O75712 270 aa10.03□□□□□ -0.8
CLIP1-203ENST00000361654 ACHEP22303 614 aa10.03□□□□□ -0.8
CLIP1-203ENST00000361654 HOXD11P31277 338 aaPredicted RBP10.03□□□□□ -0.8
CLIP1-203ENST00000361654 EVI2BP34910 448 aa10.03□□□□□ -0.8
CLIP1-203ENST00000361654 TMEM196Q5HYL7 178 aa10.03□□□□□ -0.8
CLIP1-203ENST00000361654 GDF7Q7Z4P5 450 aa10.03□□□□□ -0.8
CLIP1-203ENST00000361654 MS4A6EQ96DS6 147 aa10.03□□□□□ -0.8
CLIP1-203ENST00000361654 SLCO1B1Q9Y6L6 691 aa10.03□□□□□ -0.8
CLIP1-203ENST00000361654 MICAL3Q7RTP6 2002 aa10.03□□□□□ -0.8
CLIP1-203ENST00000361654 MEIKINA0A087WXM9 373 aa10.03□□□□□ -0.8
CLIP1-203ENST00000361654 HS3ST1O14792 307 aa10.03□□□□□ -0.8
CLIP1-203ENST00000361654 C4BP0C0L5 1744 aa10.03□□□□□ -0.8
CLIP1-203ENST00000361654 YIF1BQ5BJH7 314 aa10.03□□□□□ -0.8
CLIP1-203ENST00000361654 SLC36A1Q7Z2H8 476 aa10.03□□□□□ -0.8
CLIP1-203ENST00000361654 CDC20BQ86Y33 519 aa10.03□□□□□ -0.8
CLIP1-203ENST00000361654 QRSL1Q9H0R6 528 aaKnown RBP10.03□□□□□ -0.8
CLIP1-203ENST00000361654 OR51J1Q9H342 316 aa10.03□□□□□ -0.8
CLIP1-203ENST00000361654 FN3KRPQ9HA64 309 aa10.03□□□□□ -0.8
CLIP1-203ENST00000361654 SEMA4GQ9NTN9 838 aa10.03□□□□□ -0.8
CLIP1-203ENST00000361654 SLC16A6O15403 523 aa10.03□□□□□ -0.8
CLIP1-203ENST00000361654 ST8SIA5O15466 376 aa10.03□□□□□ -0.8
CLIP1-203ENST00000361654 PHF1O43189 567 aaPredicted RBP10.03□□□□□ -0.8
CLIP1-203ENST00000361654 TXNL1O43396 289 aa10.03□□□□□ -0.8
CLIP1-203ENST00000361654 OR2J2O76002 312 aa10.03□□□□□ -0.8
CLIP1-203ENST00000361654 RPS2P15880 293 aaKnown RBP10.03□□□□□ -0.8
CLIP1-203ENST00000361654 PCBP4P57723 403 aaKnown RBP10.03□□□□□ -0.8
CLIP1-203ENST00000361654 ZNF91Q05481 1191 aa10.03□□□□□ -0.8
CLIP1-203ENST00000361654 LGI3Q8N145 548 aa10.03□□□□□ -0.8
CLIP1-203ENST00000361654 SLC38A1Q9H2H9 487 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms