RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 NECAP2Q9NVZ3 263 aa12.22□□□□□ -0.45
SRGAP3-201ENST00000360413 CA14Q9ULX7 337 aa12.22□□□□□ -0.45
SRGAP3-201ENST00000360413 EP300Q09472 2414 aaPredicted RBP12.22□□□□□ -0.45
SRGAP3-201ENST00000360413 TRBV4-1A0A0J9YWV2 114 aa12.22□□□□□ -0.45
SRGAP3-201ENST00000360413 ZNF765Q7L2R6 523 aa12.22□□□□□ -0.45
SRGAP3-201ENST00000360413 SMOQ99835 787 aa12.22□□□□□ -0.45
SRGAP3-201ENST00000360413 IER2Q9BTL4 223 aa12.22□□□□□ -0.45
SRGAP3-201ENST00000360413 ULBP3Q9BZM4 244 aa12.22□□□□□ -0.45
SRGAP3-201ENST00000360413 NOX4Q9NPH5 578 aa12.22□□□□□ -0.45
SRGAP3-201ENST00000360413 PIAS3Q9Y6X2 628 aa12.22□□□□□ -0.45
SRGAP3-201ENST00000360413 CCSO14618 274 aa12.21□□□□□ -0.45
SRGAP3-201ENST00000360413 SLC16A7O60669 478 aa12.21□□□□□ -0.45
SRGAP3-201ENST00000360413 SLURP2P0DP57 97 aa12.21□□□□□ -0.45
SRGAP3-201ENST00000360413 OR7E24Q6IFN5 339 aa12.21□□□□□ -0.45
SRGAP3-201ENST00000360413 Q6ZPB1 254 aaPredicted RBP12.21□□□□□ -0.45
SRGAP3-201ENST00000360413 TMEM123Q8N131 208 aa12.21□□□□□ -0.45
SRGAP3-201ENST00000360413 SLC22A12Q96S37 553 aa12.21□□□□□ -0.45
SRGAP3-201ENST00000360413 SERTM2A0A1B0GWG4 89 aa12.21□□□□□ -0.45
SRGAP3-201ENST00000360413 ZNF888P0CJ79 500 aaPredicted RBP12.21□□□□□ -0.45
SRGAP3-201ENST00000360413 HTR6P50406 440 aa12.21□□□□□ -0.45
SRGAP3-201ENST00000360413 C17orf67Q0P5P2 114 aa12.21□□□□□ -0.45
SRGAP3-201ENST00000360413 KHDC1LQ5JSQ8 128 aa12.21□□□□□ -0.45
SRGAP3-201ENST00000360413 HENMT1Q5T8I9 393 aaKnown RBP12.21□□□□□ -0.45
SRGAP3-201ENST00000360413 PGBD5Q8N414 524 aa12.21□□□□□ -0.45
SRGAP3-201ENST00000360413 PRO1933Q9H354 126 aa12.21□□□□□ -0.45
SRGAP3-201ENST00000360413 AKR7A2O43488 359 aa12.21□□□□□ -0.45
SRGAP3-201ENST00000360413 PTBP1P26599 531 aaKnown RBP eCLIP12.21□□□□□ -0.45
SRGAP3-201ENST00000360413 CCR9P51686 369 aa12.21□□□□□ -0.45
SRGAP3-201ENST00000360413 EXT1Q16394 746 aa12.21□□□□□ -0.45
SRGAP3-201ENST00000360413 Q3ZCU0 254 aa12.21□□□□□ -0.45
SRGAP3-201ENST00000360413 TOMM20LQ6UXN7 152 aa12.21□□□□□ -0.45
SRGAP3-201ENST00000360413 ZADH2Q8N4Q0 377 aa12.21□□□□□ -0.45
SRGAP3-201ENST00000360413 KHSRPQ92945 711 aaKnown RBP eCLIP12.21□□□□□ -0.45
SRGAP3-201ENST00000360413 JAM3Q9BX67 310 aa12.21□□□□□ -0.45
SRGAP3-201ENST00000360413 GMPR2Q9P2T1 348 aaKnown RBP12.21□□□□□ -0.45
SRGAP3-201ENST00000360413 PXDNQ92626 1479 aa12.21□□□□□ -0.45
SRGAP3-201ENST00000360413 SCN11AQ9UI33 1791 aa12.21□□□□□ -0.45
SRGAP3-201ENST00000360413 KDM4EB2RXH2 506 aaPredicted RBP12.21□□□□□ -0.45
SRGAP3-201ENST00000360413 FAM72CH0Y354 149 aa12.21□□□□□ -0.45
SRGAP3-201ENST00000360413 NPY4RP50391 375 aa12.21□□□□□ -0.45
SRGAP3-201ENST00000360413 ZNF628Q5EBL2 1059 aa12.21□□□□□ -0.45
SRGAP3-201ENST00000360413 FAM72AQ5TYM5 149 aa12.21□□□□□ -0.45
SRGAP3-201ENST00000360413 FAM72DQ6L9T8 149 aa12.21□□□□□ -0.45
SRGAP3-201ENST00000360413 FAM72BQ86X60 149 aa12.21□□□□□ -0.45
SRGAP3-201ENST00000360413 TMED6Q8WW62 240 aa12.21□□□□□ -0.45
SRGAP3-201ENST00000360413 SLC46A1Q96NT5 459 aa12.21□□□□□ -0.45
SRGAP3-201ENST00000360413 ROBO1Q9Y6N7 1651 aa12.21□□□□□ -0.46
SRGAP3-201ENST00000360413 OR7C1O76099 320 aaPredicted RBP12.21□□□□□ -0.46
SRGAP3-201ENST00000360413 ATP1B1P05026 303 aa12.21□□□□□ -0.46
SRGAP3-201ENST00000360413 FABP9Q0Z7S8 132 aa12.21□□□□□ -0.46
SRGAP3-201ENST00000360413 SPRED1Q7Z699 444 aa12.21□□□□□ -0.46
SRGAP3-201ENST00000360413 ZFP62Q8NB50 900 aaPredicted RBP12.21□□□□□ -0.46
SRGAP3-201ENST00000360413 OR51S1Q8NGJ8 323 aa12.21□□□□□ -0.46
SRGAP3-201ENST00000360413 SMIM12Q96EX1 92 aa12.21□□□□□ -0.46
SRGAP3-201ENST00000360413 PECRQ9BY49 303 aa12.21□□□□□ -0.46
SRGAP3-201ENST00000360413 CTDSP1Q9GZU7 261 aa12.21□□□□□ -0.46
SRGAP3-201ENST00000360413 SLX4Q8IY92 1834 aa12.21□□□□□ -0.46
SRGAP3-201ENST00000360413 AREGP15514 252 aa12.21□□□□□ -0.46
SRGAP3-201ENST00000360413 OR13C8Q8NGS7 320 aa12.21□□□□□ -0.46
SRGAP3-201ENST00000360413 SLC12A9Q9BXP2 914 aa12.21□□□□□ -0.46
SRGAP3-201ENST00000360413 SHPRHQ149N8 1683 aa12.21□□□□□ -0.46
SRGAP3-201ENST00000360413 OR5H8P0DN80 308 aa12.21□□□□□ -0.46
SRGAP3-201ENST00000360413 ERHP84090 104 aaKnown RBP12.21□□□□□ -0.46
SRGAP3-201ENST00000360413 PNPLA1Q8N8W4 532 aa12.21□□□□□ -0.46
SRGAP3-201ENST00000360413 SCAMP4Q969E2 229 aa12.21□□□□□ -0.46
SRGAP3-201ENST00000360413 NXF2Q9GZY0 626 aaKnown RBP12.21□□□□□ -0.46
SRGAP3-201ENST00000360413 DNMT3BQ9UBC3 853 aaKnown RBP12.21□□□□□ -0.46
SRGAP3-201ENST00000360413 LAMA4Q16363 1823 aa12.21□□□□□ -0.46
SRGAP3-201ENST00000360413 COL3A1P02461 1466 aaPredicted RBP12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 ZCWPW2A0A1B0GU75 182 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 ADAM11O75078 769 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 SRMP19623 302 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 AMTP48728 403 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 SIM1P81133 766 aaPredicted RBP12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 CBLL1Q75N03 491 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 H2BFWTQ7Z2G1 175 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 PRSS35Q8N3Z0 413 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 OR52I1Q8NGK6 324 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 TSLPQ969D9 159 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 SELENOIQ9C0D9 397 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 PHLDA2Q53GA4 152 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 KDM4DQ6B0I6 523 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 RPL7L1Q6DKI1 246 aaKnown RBP12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 PRSS45Q7RTY3 260 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 C11orf42Q8N5U0 333 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 HEYLQ9NQ87 328 aaPredicted RBP12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 KCNG2Q9UJ96 466 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 CBLCQ9ULV8 474 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 MRPS2Q9Y399 296 aaKnown RBP12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 AP1G1O43747 822 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 SUSD5O60279 629 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 PRAMEF4O60810 478 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 GLAP06280 429 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 SLC10A3P09131 477 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 MMP7P09237 267 aaPredicted RBP12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 MEOX2P50222 304 aa12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 HSF5Q4G112 596 aaPredicted RBP12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 CPEB2Q7Z5Q1 589 aaKnown RBP12.2□□□□□ -0.46
SRGAP3-201ENST00000360413 BLNKQ8WV28 456 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms