RNA–Protein interactions for RNA: ENST00000359128.9

NLRC3-202, Transcript of NLR family CARD domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC3, Length 6,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-202ENST00000359128 HOXD11P31277 338 aaPredicted RBP11.9□□□□□ -0.5
NLRC3-202ENST00000359128 GABRA4P48169 554 aa11.9□□□□□ -0.5
NLRC3-202ENST00000359128 OR2G6Q5TZ20 316 aa11.9□□□□□ -0.5
NLRC3-202ENST00000359128 FAM71E1Q6IPT2 247 aa11.9□□□□□ -0.5
NLRC3-202ENST00000359128 RGS7BPQ6MZT1 257 aaPredicted RBP11.9□□□□□ -0.5
NLRC3-202ENST00000359128 GCNT2Q8N0V5 402 aa11.9□□□□□ -0.5
NLRC3-202ENST00000359128 CCL4L1Q8NHW4 92 aa11.9□□□□□ -0.5
NLRC3-202ENST00000359128 DHRS4Q9BTZ2 278 aa11.9□□□□□ -0.5
NLRC3-202ENST00000359128 EMC7Q9NPA0 242 aa11.9□□□□□ -0.5
NLRC3-202ENST00000359128 ISYNA1Q9NPH2 558 aa11.9□□□□□ -0.5
NLRC3-202ENST00000359128 PRELID1Q9Y255 219 aa11.9□□□□□ -0.5
NLRC3-202ENST00000359128 MICAL3Q7RTP6 2002 aa11.9□□□□□ -0.51
NLRC3-202ENST00000359128 A0A1W2PNR3 127 aa11.89□□□□□ -0.51
NLRC3-202ENST00000359128 OR5H15A6NDH6 313 aa11.89□□□□□ -0.51
NLRC3-202ENST00000359128 OR5H14A6NHG9 310 aa11.89□□□□□ -0.51
NLRC3-202ENST00000359128 OR5H1A6NKK0 313 aa11.89□□□□□ -0.51
NLRC3-202ENST00000359128 M0R082 166 aa11.89□□□□□ -0.51
NLRC3-202ENST00000359128 YIF1AO95070 293 aa11.89□□□□□ -0.51
NLRC3-202ENST00000359128 UBBP0CG47 229 aa11.89□□□□□ -0.51
NLRC3-202ENST00000359128 KDM8Q8N371 416 aa11.89□□□□□ -0.51
NLRC3-202ENST00000359128 DEDD2Q8WXF8 326 aa11.89□□□□□ -0.51
NLRC3-202ENST00000359128 TSLPQ969D9 159 aa11.89□□□□□ -0.51
NLRC3-202ENST00000359128 KCNIP2Q9NS61 270 aa11.89□□□□□ -0.51
NLRC3-202ENST00000359128 WBP1LQ9NX94 342 aa11.89□□□□□ -0.51
NLRC3-202ENST00000359128 A0A087WZY1 265 aa11.89□□□□□ -0.51
NLRC3-202ENST00000359128 M0R296 226 aa11.89□□□□□ -0.51
NLRC3-202ENST00000359128 POU2F2P09086 479 aa11.89□□□□□ -0.51
NLRC3-202ENST00000359128 HTR1FP30939 366 aa11.89□□□□□ -0.51
NLRC3-202ENST00000359128 EIF3IQ13347 325 aaKnown RBP11.89□□□□□ -0.51
NLRC3-202ENST00000359128 DUSP5Q16690 384 aa11.89□□□□□ -0.51
NLRC3-202ENST00000359128 TRMT12Q53H54 448 aaKnown RBP11.89□□□□□ -0.51
NLRC3-202ENST00000359128 THEM4Q5T1C6 240 aa11.89□□□□□ -0.51
NLRC3-202ENST00000359128 OR2A2Q6IF42 318 aa11.89□□□□□ -0.51
NLRC3-202ENST00000359128 GLIPR1L1Q6UWM5 242 aa11.89□□□□□ -0.51
NLRC3-202ENST00000359128 RAB22AQ9UL26 194 aa11.89□□□□□ -0.51
NLRC3-202ENST00000359128 RPS2P15880 293 aaKnown RBP11.89□□□□□ -0.51
NLRC3-202ENST00000359128 CD22P20273 847 aa11.89□□□□□ -0.51
NLRC3-202ENST00000359128 GIPRP48546 466 aa11.89□□□□□ -0.51
NLRC3-202ENST00000359128 MRPS34P82930 218 aaKnown RBP11.89□□□□□ -0.51
NLRC3-202ENST00000359128 OR1C1Q15619 314 aa11.89□□□□□ -0.51
NLRC3-202ENST00000359128 ZNF718Q3SXZ3 478 aa11.89□□□□□ -0.51
NLRC3-202ENST00000359128 YIF1BQ5BJH7 314 aa11.89□□□□□ -0.51
NLRC3-202ENST00000359128 ZNF626Q68DY1 528 aa11.89□□□□□ -0.51
NLRC3-202ENST00000359128 OR1S2Q8NGQ3 325 aa11.89□□□□□ -0.51
NLRC3-202ENST00000359128 PLEKHF2Q9H8W4 249 aa11.89□□□□□ -0.51
NLRC3-202ENST00000359128 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.89□□□□□ -0.51
NLRC3-202ENST00000359128 LUZP4Q9P127 313 aa11.89□□□□□ -0.51
NLRC3-202ENST00000359128 CITO14578 2027 aa11.89□□□□□ -0.51
NLRC3-202ENST00000359128 SULT1C2O00338 296 aa11.89□□□□□ -0.51
NLRC3-202ENST00000359128 COQ10AQ96MF6 247 aa11.89□□□□□ -0.51
NLRC3-202ENST00000359128 MBOAT4Q96T53 435 aa11.89□□□□□ -0.51
NLRC3-202ENST00000359128 SMCO4Q9NRQ5 59 aa11.89□□□□□ -0.51
NLRC3-202ENST00000359128 ONECUT1Q9UBC0 465 aa11.89□□□□□ -0.51
NLRC3-202ENST00000359128 SIRPB1O00241 398 aa11.89□□□□□ -0.51
NLRC3-202ENST00000359128 ZNF195O14628 629 aa11.89□□□□□ -0.51
NLRC3-202ENST00000359128 HLA-DOBP13765 273 aa11.89□□□□□ -0.51
NLRC3-202ENST00000359128 HTR2BP41595 481 aa11.89□□□□□ -0.51
NLRC3-202ENST00000359128 ZNF91Q05481 1191 aa11.89□□□□□ -0.51
NLRC3-202ENST00000359128 TMEM211Q6ICI0 200 aa11.89□□□□□ -0.51
NLRC3-202ENST00000359128 DHRS13Q6UX07 377 aa11.89□□□□□ -0.51
NLRC3-202ENST00000359128 FJX1Q86VR8 437 aa11.89□□□□□ -0.51
NLRC3-202ENST00000359128 UBAC2Q8NBM4 344 aa11.89□□□□□ -0.51
NLRC3-202ENST00000359128 TMEM106AQ96A25 262 aa11.89□□□□□ -0.51
NLRC3-202ENST00000359128 CSF3P09919 207 aa11.88□□□□□ -0.51
NLRC3-202ENST00000359128 CR2P20023 1033 aa11.88□□□□□ -0.51
NLRC3-202ENST00000359128 TACR1P25103 407 aa11.88□□□□□ -0.51
NLRC3-202ENST00000359128 CRMP1Q14194 572 aa11.88□□□□□ -0.51
NLRC3-202ENST00000359128 BCL7CQ8WUZ0 217 aaPredicted RBP11.88□□□□□ -0.51
NLRC3-202ENST00000359128 SLC39A7Q92504 469 aa11.88□□□□□ -0.51
NLRC3-202ENST00000359128 MVB12AQ96EY5 273 aa11.88□□□□□ -0.51
NLRC3-202ENST00000359128 SLC35E1Q96K37 410 aa11.88□□□□□ -0.51
NLRC3-202ENST00000359128 OXGR1Q96P68 337 aa11.88□□□□□ -0.51
NLRC3-202ENST00000359128 TMEM82A0PJX8 343 aa11.88□□□□□ -0.51
NLRC3-202ENST00000359128 H3BMQ9 156 aa11.88□□□□□ -0.51
NLRC3-202ENST00000359128 PIPP12273 146 aaPredicted RBP11.88□□□□□ -0.51
NLRC3-202ENST00000359128 SERPINF1P36955 418 aa11.88□□□□□ -0.51
NLRC3-202ENST00000359128 CSN1S1P47710 185 aa11.88□□□□□ -0.51
NLRC3-202ENST00000359128 CLDN12P56749 244 aa11.88□□□□□ -0.51
NLRC3-202ENST00000359128 TRIP6Q15654 476 aaKnown RBP11.88□□□□□ -0.51
NLRC3-202ENST00000359128 Q6ZS52 159 aa11.88□□□□□ -0.51
NLRC3-202ENST00000359128 TMEM200AQ86VY9 491 aa11.88□□□□□ -0.51
NLRC3-202ENST00000359128 SLC16A11Q8NCK7 471 aa11.88□□□□□ -0.51
NLRC3-202ENST00000359128 OR56B4Q8NH76 319 aa11.88□□□□□ -0.51
NLRC3-202ENST00000359128 MRPS24Q96EL2 167 aaKnown RBP11.88□□□□□ -0.51
NLRC3-202ENST00000359128 CHST8Q9H2A9 424 aa11.88□□□□□ -0.51
NLRC3-202ENST00000359128 SLX4Q8IY92 1834 aa11.88□□□□□ -0.51
NLRC3-202ENST00000359128 CXCL13O43927 109 aa11.88□□□□□ -0.51
NLRC3-202ENST00000359128 MGST1P10620 155 aaKnown RBP11.88□□□□□ -0.51
NLRC3-202ENST00000359128 BTG2P78543 158 aa11.88□□□□□ -0.51
NLRC3-202ENST00000359128 TXLNGYQ9BZA5 131 aa11.88□□□□□ -0.51
NLRC3-202ENST00000359128 RCE1Q9Y256 329 aa11.88□□□□□ -0.51
NLRC3-202ENST00000359128 LOC100289279A0A1B0GTE1 492 aa11.88□□□□□ -0.51
NLRC3-202ENST00000359128 GUSBP08236 651 aa11.88□□□□□ -0.51
NLRC3-202ENST00000359128 SNRPBP14678 240 aaKnown RBP11.88□□□□□ -0.51
NLRC3-202ENST00000359128 FPR3P25089 353 aa11.88□□□□□ -0.51
NLRC3-202ENST00000359128 GPR12P47775 334 aa11.88□□□□□ -0.51
NLRC3-202ENST00000359128 TLE4Q04727 773 aa11.88□□□□□ -0.51
NLRC3-202ENST00000359128 TRA2AQ13595 282 aaKnown RBP eCLIP11.88□□□□□ -0.51
NLRC3-202ENST00000359128 IDO2Q6ZQW0 420 aa11.88□□□□□ -0.51
NLRC3-202ENST00000359128 SLC15A4Q8N697 577 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms