RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 APEHP13798 732 aaKnown RBP11.39□□□□□ -0.59
GGPS1-202ENST00000358966 PTAFRP25105 342 aa11.39□□□□□ -0.59
GGPS1-202ENST00000358966 FOLR3P41439 243 aa11.39□□□□□ -0.59
GGPS1-202ENST00000358966 SLC6A8P48029 635 aa11.39□□□□□ -0.59
GGPS1-202ENST00000358966 OR12D2P58182 307 aa11.39□□□□□ -0.59
GGPS1-202ENST00000358966 SCN1BQ07699 218 aa11.39□□□□□ -0.59
GGPS1-202ENST00000358966 MELKQ14680 651 aa11.39□□□□□ -0.59
GGPS1-202ENST00000358966 TSC22D1Q15714 1073 aa11.39□□□□□ -0.59
GGPS1-202ENST00000358966 MESTQ5EB52 335 aa11.39□□□□□ -0.59
GGPS1-202ENST00000358966 FAM122BQ7Z309 247 aa11.39□□□□□ -0.59
GGPS1-202ENST00000358966 ACBD7Q8N6N7 88 aa11.39□□□□□ -0.59
GGPS1-202ENST00000358966 LRRC75AQ8NAA5 344 aa11.39□□□□□ -0.59
GGPS1-202ENST00000358966 SMPDL3BQ92485 455 aa11.39□□□□□ -0.59
GGPS1-202ENST00000358966 C1GALT1C1Q96EU7 318 aa11.39□□□□□ -0.59
GGPS1-202ENST00000358966 IMMP1LQ96LU5 166 aa11.39□□□□□ -0.59
GGPS1-202ENST00000358966 SRA1Q9HD15 236 aaKnown RBP11.39□□□□□ -0.59
GGPS1-202ENST00000358966 TMEM9BQ9NQ34 198 aa11.39□□□□□ -0.59
GGPS1-202ENST00000358966 SDHAF2Q9NX18 166 aa11.39□□□□□ -0.59
GGPS1-202ENST00000358966 MLXQ9UH92 298 aa11.39□□□□□ -0.59
GGPS1-202ENST00000358966 ING1Q9UK53 422 aaPredicted RBP11.39□□□□□ -0.59
GGPS1-202ENST00000358966 ZMIZ1Q9ULJ6 1067 aa11.39□□□□□ -0.59
GGPS1-202ENST00000358966 MGAT4AQ9UM21 535 aa11.39□□□□□ -0.59
GGPS1-202ENST00000358966 HIF3AQ9Y2N7 669 aa11.39□□□□□ -0.59
GGPS1-202ENST00000358966 ATMQ13315 3056 aa11.39□□□□□ -0.59
GGPS1-202ENST00000358966 TMEM129A0AVI4 362 aa11.39□□□□□ -0.59
GGPS1-202ENST00000358966 DAPL1A0PJW8 107 aa11.39□□□□□ -0.59
GGPS1-202ENST00000358966 DNASE2O00115 360 aaPredicted RBP11.39□□□□□ -0.59
GGPS1-202ENST00000358966 GALR2O43603 387 aaPredicted RBP11.39□□□□□ -0.59
GGPS1-202ENST00000358966 EFNA2O43921 213 aa11.39□□□□□ -0.59
GGPS1-202ENST00000358966 TRIM3O75382 744 aaPredicted RBP11.39□□□□□ -0.59
GGPS1-202ENST00000358966 RPS19P39019 145 aaKnown RBP11.39□□□□□ -0.59
GGPS1-202ENST00000358966 FABP5Q01469 135 aa11.39□□□□□ -0.59
GGPS1-202ENST00000358966 Q0VFX4 171 aa11.39□□□□□ -0.59
GGPS1-202ENST00000358966 SWI5Q1ZZU3 235 aa11.39□□□□□ -0.59
GGPS1-202ENST00000358966 ZNF322Q6U7Q0 402 aaPredicted RBP11.39□□□□□ -0.59
GGPS1-202ENST00000358966 DPY19L2P2Q6ZN68 376 aa11.39□□□□□ -0.59
GGPS1-202ENST00000358966 SLC16A13Q7RTY0 426 aa11.39□□□□□ -0.59
GGPS1-202ENST00000358966 STPG2Q8N412 459 aa11.39□□□□□ -0.59
GGPS1-202ENST00000358966 SUMF1Q8NBK3 374 aa11.39□□□□□ -0.59
GGPS1-202ENST00000358966 KBTBD8Q8NFY9 601 aa11.39□□□□□ -0.59
GGPS1-202ENST00000358966 OR5L2Q8NGL0 311 aa11.39□□□□□ -0.59
GGPS1-202ENST00000358966 OR6S1Q8NH40 331 aa11.39□□□□□ -0.59
GGPS1-202ENST00000358966 SPACA9Q96E40 222 aaPredicted RBP11.39□□□□□ -0.59
GGPS1-202ENST00000358966 CDCP1Q9H5V8 836 aa11.39□□□□□ -0.59
GGPS1-202ENST00000358966 SNTG1Q9NSN8 517 aa11.39□□□□□ -0.59
GGPS1-202ENST00000358966 TAS2R5Q9NYW4 299 aa11.39□□□□□ -0.59
GGPS1-202ENST00000358966 PPP4R1LQ9P1A2 415 aa11.39□□□□□ -0.59
GGPS1-202ENST00000358966 PADI1Q9ULC6 663 aa11.39□□□□□ -0.59
GGPS1-202ENST00000358966 EXOSC1Q9Y3B2 195 aaKnown RBP11.39□□□□□ -0.59
GGPS1-202ENST00000358966 NSG1A0A0A6YYJ2 146 aa11.38□□□□□ -0.59
GGPS1-202ENST00000358966 TVP23AA6NH52 213 aa11.38□□□□□ -0.59
GGPS1-202ENST00000358966 CD8B2A6NJW9 211 aa11.38□□□□□ -0.59
GGPS1-202ENST00000358966 J3QLW9 94 aa11.38□□□□□ -0.59
GGPS1-202ENST00000358966 IFNGP01579 166 aa11.38□□□□□ -0.59
GGPS1-202ENST00000358966 BGLAPP02818 100 aa11.38□□□□□ -0.59
GGPS1-202ENST00000358966 ZNF806P0C7X5 589 aa11.38□□□□□ -0.59
GGPS1-202ENST00000358966 CCL3P10147 92 aa11.38□□□□□ -0.59
GGPS1-202ENST00000358966 CD8BP10966 210 aa11.38□□□□□ -0.59
GGPS1-202ENST00000358966 ZNF19P17023 458 aa11.38□□□□□ -0.59
GGPS1-202ENST00000358966 SPI1P17947 270 aa11.38□□□□□ -0.59
GGPS1-202ENST00000358966 PSMA1P25786 263 aaKnown RBP11.38□□□□□ -0.59
GGPS1-202ENST00000358966 E2F1Q01094 437 aa11.38□□□□□ -0.59
GGPS1-202ENST00000358966 ZNF85Q03923 595 aa11.38□□□□□ -0.59
GGPS1-202ENST00000358966 TP53I3Q53FA7 332 aa11.38□□□□□ -0.59
GGPS1-202ENST00000358966 HES3Q5TGS1 186 aa11.38□□□□□ -0.59
GGPS1-202ENST00000358966 C1orf140Q5VVS0 124 aa11.38□□□□□ -0.59
GGPS1-202ENST00000358966 MDGA2Q7Z553 956 aa11.38□□□□□ -0.59
GGPS1-202ENST00000358966 GLCCI1Q86VQ1 547 aa11.38□□□□□ -0.59
GGPS1-202ENST00000358966 OR5J2Q8NH18 312 aa11.38□□□□□ -0.59
GGPS1-202ENST00000358966 ZNF417Q8TAU3 575 aa11.38□□□□□ -0.59
GGPS1-202ENST00000358966 LOXL4Q96JB6 756 aa11.38□□□□□ -0.59
GGPS1-202ENST00000358966 C4orf36Q96KX1 117 aa11.38□□□□□ -0.59
GGPS1-202ENST00000358966 UBL7Q96S82 380 aaPredicted RBP11.38□□□□□ -0.59
GGPS1-202ENST00000358966 ZNF587Q96SQ5 575 aaPredicted RBP11.38□□□□□ -0.59
GGPS1-202ENST00000358966 ASPNQ9BXN1 380 aa11.38□□□□□ -0.59
GGPS1-202ENST00000358966 REG4Q9BYZ8 158 aa11.38□□□□□ -0.59
GGPS1-202ENST00000358966 BARHL1Q9BZE3 327 aa11.38□□□□□ -0.59
GGPS1-202ENST00000358966 SYT4Q9H2B2 425 aa11.38□□□□□ -0.59
GGPS1-202ENST00000358966 EVA1AQ9H8M9 152 aa11.38□□□□□ -0.59
GGPS1-202ENST00000358966 TCFL5Q9UL49 500 aa11.38□□□□□ -0.59
GGPS1-202ENST00000358966 DSPP15924 2871 aaKnown RBP11.38□□□□□ -0.59
GGPS1-202ENST00000358966 LOC102723996A0A087X1L8 192 aa11.38□□□□□ -0.59
GGPS1-202ENST00000358966 A0A1B0GWJ7 208 aa11.38□□□□□ -0.59
GGPS1-202ENST00000358966 A0A1W2PPL8 197 aa11.38□□□□□ -0.59
GGPS1-202ENST00000358966 SLC22A31A6NKX4 558 aa11.38□□□□□ -0.59
GGPS1-202ENST00000358966 PRR32B1ATL7 298 aa11.38□□□□□ -0.59
GGPS1-202ENST00000358966 LGALS8O00214 317 aa11.38□□□□□ -0.59
GGPS1-202ENST00000358966 CLN5O75503 358 aa11.38□□□□□ -0.59
GGPS1-202ENST00000358966 CPEP16870 476 aa11.38□□□□□ -0.59
GGPS1-202ENST00000358966 KLK2P20151 261 aa11.38□□□□□ -0.59
GGPS1-202ENST00000358966 POLR2HP52434 150 aaKnown RBP11.38□□□□□ -0.59
GGPS1-202ENST00000358966 LGALS3BPQ08380 585 aa11.38□□□□□ -0.59
GGPS1-202ENST00000358966 ASAH1Q13510 395 aa11.38□□□□□ -0.59
GGPS1-202ENST00000358966 IL10RAQ13651 578 aa11.38□□□□□ -0.59
GGPS1-202ENST00000358966 ZNF79Q15937 498 aa11.38□□□□□ -0.59
GGPS1-202ENST00000358966 CRTC2Q53ET0 693 aaPredicted RBP11.38□□□□□ -0.59
GGPS1-202ENST00000358966 FAM27D1Q5T7N8 215 aa11.38□□□□□ -0.59
GGPS1-202ENST00000358966 GRINAQ7Z429 371 aa11.38□□□□□ -0.59
GGPS1-202ENST00000358966 KLHL36Q8N4N3 616 aa11.38□□□□□ -0.59
GGPS1-202ENST00000358966 OR13C5Q8NGS8 318 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms