RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 PRR22Q8IZ63 422 aa9.17□□□□□ -0.94
PTPRA-203ENST00000356147 CA13Q8N1Q1 262 aa9.17□□□□□ -0.94
PTPRA-203ENST00000356147 BPIFB2Q8N4F0 458 aa9.17□□□□□ -0.94
PTPRA-203ENST00000356147 NT5CQ8TCD5 201 aa9.17□□□□□ -0.94
PTPRA-203ENST00000356147 PHOSPHO1Q8TCT1 267 aa9.17□□□□□ -0.94
PTPRA-203ENST00000356147 TM4SF19Q96DZ7 209 aa9.17□□□□□ -0.94
PTPRA-203ENST00000356147 KTI12Q96EK9 354 aaPredicted RBP9.17□□□□□ -0.94
PTPRA-203ENST00000356147 SLC6A7Q99884 636 aa9.17□□□□□ -0.94
PTPRA-203ENST00000356147 CMSS1Q9BQ75 279 aaKnown RBP9.17□□□□□ -0.94
PTPRA-203ENST00000356147 GRHPRQ9UBQ7 328 aa9.17□□□□□ -0.94
PTPRA-203ENST00000356147 SPACA6W5XKT8 324 aa9.17□□□□□ -0.94
PTPRA-203ENST00000356147 FREM3P0C091 2139 aa9.17□□□□□ -0.94
PTPRA-203ENST00000356147 GLAP06280 429 aa9.17□□□□□ -0.94
PTPRA-203ENST00000356147 GP1BAP07359 652 aa9.17□□□□□ -0.94
PTPRA-203ENST00000356147 CSRP1P21291 193 aaKnown RBP9.17□□□□□ -0.94
PTPRA-203ENST00000356147 NFYBP25208 207 aa9.17□□□□□ -0.94
PTPRA-203ENST00000356147 MAP3K8P41279 467 aa9.17□□□□□ -0.94
PTPRA-203ENST00000356147 RBM34P42696 430 aaKnown RBP9.17□□□□□ -0.94
PTPRA-203ENST00000356147 GPR143P51810 404 aa9.17□□□□□ -0.94
PTPRA-203ENST00000356147 PSMD4P55036 377 aaKnown RBP9.17□□□□□ -0.94
PTPRA-203ENST00000356147 PPIAP62937 165 aaKnown RBP9.17□□□□□ -0.94
PTPRA-203ENST00000356147 ZNHIT3Q15649 155 aaPredicted RBP9.17□□□□□ -0.94
PTPRA-203ENST00000356147 RAB11BQ15907 218 aa9.17□□□□□ -0.94
PTPRA-203ENST00000356147 MARCH3Q86UD3 253 aa9.17□□□□□ -0.94
PTPRA-203ENST00000356147 MCATQ8IVS2 390 aaKnown RBP9.17□□□□□ -0.94
PTPRA-203ENST00000356147 JAGN1Q8N5M9 183 aa9.17□□□□□ -0.94
PTPRA-203ENST00000356147 CSNK1A1LQ8N752 337 aa9.17□□□□□ -0.94
PTPRA-203ENST00000356147 CAMKVQ8NCB2 501 aa9.17□□□□□ -0.94
PTPRA-203ENST00000356147 OR1J4Q8NGS1 313 aa9.17□□□□□ -0.94
PTPRA-203ENST00000356147 ROBO4Q8WZ75 1007 aa9.17□□□□□ -0.94
PTPRA-203ENST00000356147 PHYHIPQ92561 330 aa9.17□□□□□ -0.94
PTPRA-203ENST00000356147 TRIM43Q96BQ3 446 aaPredicted RBP9.17□□□□□ -0.94
PTPRA-203ENST00000356147 SLC25A36Q96CQ1 311 aa9.17□□□□□ -0.94
PTPRA-203ENST00000356147 SEH1LQ96EE3 360 aa9.17□□□□□ -0.94
PTPRA-203ENST00000356147 MRPL48Q96GC5 212 aaKnown RBP9.17□□□□□ -0.94
PTPRA-203ENST00000356147 RBM18Q96H35 190 aaKnown RBP9.17□□□□□ -0.94
PTPRA-203ENST00000356147 LPAR4Q99677 370 aa9.17□□□□□ -0.94
PTPRA-203ENST00000356147 ZFYVE21Q9BQ24 234 aa9.17□□□□□ -0.94
PTPRA-203ENST00000356147 CCDC3Q9BQI4 270 aa9.17□□□□□ -0.94
PTPRA-203ENST00000356147 SLC25A32Q9H2D1 315 aa9.17□□□□□ -0.94
PTPRA-203ENST00000356147 FAM60AQ9NP50 221 aa9.17□□□□□ -0.94
PTPRA-203ENST00000356147 TAS2R4Q9NYW5 299 aa9.17□□□□□ -0.94
PTPRA-203ENST00000356147 COMMD9Q9P000 198 aa9.17□□□□□ -0.94
PTPRA-203ENST00000356147 THAP10Q9P2Z0 257 aaPredicted RBP9.17□□□□□ -0.94
PTPRA-203ENST00000356147 MSRAQ9UJ68 235 aa9.17□□□□□ -0.94
PTPRA-203ENST00000356147 PURGQ9UJV8 347 aaKnown RBP9.17□□□□□ -0.94
PTPRA-203ENST00000356147 A0A087WV62 115 aa9.16□□□□□ -0.94
PTPRA-203ENST00000356147 TRBV5-5A0A0J9YX44 114 aa9.16□□□□□ -0.94
PTPRA-203ENST00000356147 RNF222A6NCQ9 220 aa9.16□□□□□ -0.94
PTPRA-203ENST00000356147 OR2AT4A6NND4 320 aa9.16□□□□□ -0.94
PTPRA-203ENST00000356147 SIGLEC6O43699 453 aa9.16□□□□□ -0.94
PTPRA-203ENST00000356147 WDPCPO95876 746 aa9.16□□□□□ -0.94
PTPRA-203ENST00000356147 SPARCP09486 303 aa9.16□□□□□ -0.94
PTPRA-203ENST00000356147 MAOAP21397 527 aa9.16□□□□□ -0.94
PTPRA-203ENST00000356147 MAPK3P27361 379 aaPredicted RBP9.16□□□□□ -0.94
PTPRA-203ENST00000356147 CSF2RBP32927 897 aa9.16□□□□□ -0.94
PTPRA-203ENST00000356147 KCNJ3P48549 501 aa9.16□□□□□ -0.94
PTPRA-203ENST00000356147 RPL18Q07020 188 aaKnown RBP9.16□□□□□ -0.94
PTPRA-203ENST00000356147 FGL1Q08830 312 aa9.16□□□□□ -0.94
PTPRA-203ENST00000356147 DMWDQ09019 674 aa9.16□□□□□ -0.94
PTPRA-203ENST00000356147 EIF2B1Q14232 305 aaKnown RBP9.16□□□□□ -0.94
PTPRA-203ENST00000356147 PLEKHN1Q494U1 663 aaPredicted RBP9.16□□□□□ -0.94
PTPRA-203ENST00000356147 DMRTC1Q5HYR2 192 aa9.16□□□□□ -0.94
PTPRA-203ENST00000356147 PABPC1L2AQ5JQF8 200 aa9.16□□□□□ -0.94
PTPRA-203ENST00000356147 SPPL3Q8TCT6 385 aa9.16□□□□□ -0.94
PTPRA-203ENST00000356147 CERS4Q9HA82 394 aa9.16□□□□□ -0.94
PTPRA-203ENST00000356147 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.16□□□□□ -0.94
PTPRA-203ENST00000356147 TMED7Q9Y3B3 224 aa9.16□□□□□ -0.94
PTPRA-203ENST00000356147 FAM96BQ9Y3D0 163 aa9.16□□□□□ -0.94
PTPRA-203ENST00000356147 TDRD6O60522 2096 aaKnown RBP9.16□□□□□ -0.94
PTPRA-203ENST00000356147 KIF26BQ2KJY2 2108 aa9.16□□□□□ -0.94
PTPRA-203ENST00000356147 ARPC3O15145 178 aa9.16□□□□□ -0.94
PTPRA-203ENST00000356147 OR2T1O43869 369 aa9.16□□□□□ -0.94
PTPRA-203ENST00000356147 ACTL6AO96019 429 aa9.16□□□□□ -0.94
PTPRA-203ENST00000356147 CD14P08571 375 aa9.16□□□□□ -0.94
PTPRA-203ENST00000356147 UBBP0CG47 229 aa9.16□□□□□ -0.94
PTPRA-203ENST00000356147 UBCP0CG48 685 aaKnown RBP9.16□□□□□ -0.94
PTPRA-203ENST00000356147 MYOGP15173 224 aa9.16□□□□□ -0.94
PTPRA-203ENST00000356147 AKR1C4P17516 323 aa9.16□□□□□ -0.94
PTPRA-203ENST00000356147 PPM1FP49593 454 aaPredicted RBP9.16□□□□□ -0.94
PTPRA-203ENST00000356147 RPS27AP62979 156 aaKnown RBP9.16□□□□□ -0.94
PTPRA-203ENST00000356147 UBA52P62987 128 aaKnown RBP9.16□□□□□ -0.94
PTPRA-203ENST00000356147 MFGE8Q08431 387 aaPredicted RBP9.16□□□□□ -0.94
PTPRA-203ENST00000356147 SNTB1Q13884 538 aaKnown RBP9.16□□□□□ -0.94
PTPRA-203ENST00000356147 GLT8D1Q68CQ7 371 aa9.16□□□□□ -0.94
PTPRA-203ENST00000356147 MOB3CQ70IA8 216 aa9.16□□□□□ -0.94
PTPRA-203ENST00000356147 ZNF550Q7Z398 422 aa9.16□□□□□ -0.94
PTPRA-203ENST00000356147 TMEM200AQ86VY9 491 aa9.16□□□□□ -0.94
PTPRA-203ENST00000356147 TMEM17Q86X19 198 aa9.16□□□□□ -0.94
PTPRA-203ENST00000356147 KDM8Q8N371 416 aa9.16□□□□□ -0.94
PTPRA-203ENST00000356147 ZNF417Q8TAU3 575 aa9.16□□□□□ -0.94
PTPRA-203ENST00000356147 RPS4Y2Q8TD47 263 aa9.16□□□□□ -0.94
PTPRA-203ENST00000356147 CTHRC1Q96CG8 243 aa9.16□□□□□ -0.94
PTPRA-203ENST00000356147 CAPNS2Q96L46 248 aa9.16□□□□□ -0.94
PTPRA-203ENST00000356147 TSPAN32Q96QS1 320 aa9.16□□□□□ -0.94
PTPRA-203ENST00000356147 DNTTIP1Q9H147 329 aa9.16□□□□□ -0.94
PTPRA-203ENST00000356147 SFXN1Q9H9B4 322 aa9.16□□□□□ -0.94
PTPRA-203ENST00000356147 MBD2Q9UBB5 411 aa9.16□□□□□ -0.94
PTPRA-203ENST00000356147 B9D1Q9UPM9 204 aa9.16□□□□□ -0.94
PTPRA-203ENST00000356147 VSIG4Q9Y279 399 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms