RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 RBMS3Q6XE24 437 aaKnown RBP16.52■□□□□ 0.24
COL18A1-202ENST00000355480 CLDN22Q8N7P3 220 aa16.52■□□□□ 0.24
COL18A1-202ENST00000355480 PLPP5Q8NEB5 264 aa16.52■□□□□ 0.24
COL18A1-202ENST00000355480 TEX37Q96LM6 180 aa16.52■□□□□ 0.24
COL18A1-202ENST00000355480 PSD2Q9BQI7 771 aa16.52■□□□□ 0.24
COL18A1-202ENST00000355480 TUBB1Q9H4B7 451 aa16.52■□□□□ 0.24
COL18A1-202ENST00000355480 I6L893 689 aaPredicted RBP16.52■□□□□ 0.24
COL18A1-202ENST00000355480 FGF17O60258 216 aa16.52■□□□□ 0.24
COL18A1-202ENST00000355480 TNFSF15O95150 251 aa16.52■□□□□ 0.24
COL18A1-202ENST00000355480 PPP2CBP62714 309 aa16.52■□□□□ 0.24
COL18A1-202ENST00000355480 PPP2CAP67775 309 aa16.52■□□□□ 0.24
COL18A1-202ENST00000355480 TLE4Q04727 773 aa16.52■□□□□ 0.24
COL18A1-202ENST00000355480 ARHGAP11BQ3KRB8 267 aa16.52■□□□□ 0.24
COL18A1-202ENST00000355480 WBP2Q969T9 261 aa16.52■□□□□ 0.24
COL18A1-202ENST00000355480 AHDC1Q5TGY3 1603 aaPredicted RBP16.52■□□□□ 0.24
COL18A1-202ENST00000355480 BTBD17A6NE02 478 aa16.52■□□□□ 0.24
COL18A1-202ENST00000355480 SULT1B1O43704 296 aa16.52■□□□□ 0.24
COL18A1-202ENST00000355480 ITGBL1O95965 494 aaPredicted RBP16.52■□□□□ 0.24
COL18A1-202ENST00000355480 DEFB109BQ30KR1 87 aa16.52■□□□□ 0.24
COL18A1-202ENST00000355480 ZMAT1Q5H9K5 638 aa16.52■□□□□ 0.24
COL18A1-202ENST00000355480 FCRL1Q96LA6 429 aa16.52■□□□□ 0.24
COL18A1-202ENST00000355480 GPR173Q9NS66 373 aa16.52■□□□□ 0.24
COL18A1-202ENST00000355480 C5P01031 1676 aa16.52■□□□□ 0.24
COL18A1-202ENST00000355480 OR6C76A6NM76 312 aa16.52■□□□□ 0.23
COL18A1-202ENST00000355480 VAMP5O95183 116 aa16.52■□□□□ 0.23
COL18A1-202ENST00000355480 GUSBP08236 651 aa16.52■□□□□ 0.23
COL18A1-202ENST00000355480 NID1P14543 1247 aa16.52■□□□□ 0.23
COL18A1-202ENST00000355480 PRKACAP17612 351 aa16.52■□□□□ 0.23
COL18A1-202ENST00000355480 RAD52P43351 418 aa16.52■□□□□ 0.23
COL18A1-202ENST00000355480 SAXO2Q658L1 398 aa16.52■□□□□ 0.23
COL18A1-202ENST00000355480 DOK3Q7L591 496 aa16.52■□□□□ 0.23
COL18A1-202ENST00000355480 NRARPQ7Z6K4 114 aa16.52■□□□□ 0.23
COL18A1-202ENST00000355480 CCL4L1Q8NHW4 92 aa16.52■□□□□ 0.23
COL18A1-202ENST00000355480 HPSE2Q8WWQ2 592 aa16.52■□□□□ 0.23
COL18A1-202ENST00000355480 SDF2Q99470 211 aa16.52■□□□□ 0.23
COL18A1-202ENST00000355480 ARRDC1-AS1Q9H2J1 176 aa16.52■□□□□ 0.23
COL18A1-202ENST00000355480 UFSP2Q9NUQ7 469 aa16.52■□□□□ 0.23
COL18A1-202ENST00000355480 ASIC5Q9NY37 505 aa16.52■□□□□ 0.23
COL18A1-202ENST00000355480 CGGBP1Q9UFW8 167 aaPredicted RBP16.52■□□□□ 0.23
COL18A1-202ENST00000355480 NUP98P52948 1817 aa16.52■□□□□ 0.23
COL18A1-202ENST00000355480 LAMB4A4D0S4 1761 aa16.52■□□□□ 0.23
COL18A1-202ENST00000355480 NHSL2Q5HYW2 709 aa16.52■□□□□ 0.23
COL18A1-202ENST00000355480 HIST2H3PS2Q5TEC6 136 aa16.52■□□□□ 0.23
COL18A1-202ENST00000355480 DPPA2Q7Z7J5 298 aa16.52■□□□□ 0.23
COL18A1-202ENST00000355480 OR52N1Q8NH53 320 aa16.52■□□□□ 0.23
COL18A1-202ENST00000355480 NANPQ8TBE9 248 aa16.52■□□□□ 0.23
COL18A1-202ENST00000355480 PPT2Q9UMR5 302 aa16.52■□□□□ 0.23
COL18A1-202ENST00000355480 QDPRP09417 244 aa16.51■□□□□ 0.23
COL18A1-202ENST00000355480 UBE2KP61086 200 aa16.51■□□□□ 0.23
COL18A1-202ENST00000355480 ETFBKMTQ8IXQ9 262 aa16.51■□□□□ 0.23
COL18A1-202ENST00000355480 PELI3Q8N2H9 469 aa16.51■□□□□ 0.23
COL18A1-202ENST00000355480 TMEM102Q8N9M5 508 aaPredicted RBP16.51■□□□□ 0.23
COL18A1-202ENST00000355480 ERVMER34-1Q9H9K5 563 aa16.51■□□□□ 0.23
COL18A1-202ENST00000355480 AGAP14A8MT82 685 aa16.51■□□□□ 0.23
COL18A1-202ENST00000355480 IHHQ14623 411 aa16.51■□□□□ 0.23
COL18A1-202ENST00000355480 CPEB2Q7Z5Q1 589 aaKnown RBP16.51■□□□□ 0.23
COL18A1-202ENST00000355480 NLRP8Q86W28 1048 aa16.51■□□□□ 0.23
COL18A1-202ENST00000355480 UBALD2Q8IYN6 164 aa16.51■□□□□ 0.23
COL18A1-202ENST00000355480 C1QTNF3Q9BXJ4 246 aa16.51■□□□□ 0.23
COL18A1-202ENST00000355480 PROCRQ9UNN8 238 aa16.51■□□□□ 0.23
COL18A1-202ENST00000355480 NUPL2O15504 423 aaKnown RBP16.51■□□□□ 0.23
COL18A1-202ENST00000355480 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.51■□□□□ 0.23
COL18A1-202ENST00000355480 PTRH1Q86Y79 214 aaKnown RBP16.51■□□□□ 0.23
COL18A1-202ENST00000355480 LGI1O95970 557 aa16.51■□□□□ 0.23
COL18A1-202ENST00000355480 ARPC5LQ9BPX5 153 aa16.51■□□□□ 0.23
COL18A1-202ENST00000355480 SLCO5A1Q9H2Y9 848 aa16.51■□□□□ 0.23
COL18A1-202ENST00000355480 RANGRFQ9HD47 186 aaPredicted RBP16.51■□□□□ 0.23
COL18A1-202ENST00000355480 A0A1W2PNR3 127 aa16.51■□□□□ 0.23
COL18A1-202ENST00000355480 APOA2P02652 100 aa16.51■□□□□ 0.23
COL18A1-202ENST00000355480 AADACP22760 399 aa16.51■□□□□ 0.23
COL18A1-202ENST00000355480 FUNDC1Q8IVP5 155 aa16.51■□□□□ 0.23
COL18A1-202ENST00000355480 SUMF1Q8NBK3 374 aa16.51■□□□□ 0.23
COL18A1-202ENST00000355480 TSLPQ969D9 159 aa16.51■□□□□ 0.23
COL18A1-202ENST00000355480 SARAFQ96BY9 339 aa16.51■□□□□ 0.23
COL18A1-202ENST00000355480 TCEAL2Q9H3H9 227 aaPredicted RBP16.51■□□□□ 0.23
COL18A1-202ENST00000355480 BANF2Q9H503 90 aa16.51■□□□□ 0.23
COL18A1-202ENST00000355480 TMEM9BQ9NQ34 198 aa16.51■□□□□ 0.23
COL18A1-202ENST00000355480 MYH7BA7E2Y1 1941 aa16.5■□□□□ 0.23
COL18A1-202ENST00000355480 PMS2P1A4D2B8 440 aa16.5■□□□□ 0.23
COL18A1-202ENST00000355480 GFYI3L273 518 aa16.5■□□□□ 0.23
COL18A1-202ENST00000355480 OR8U8P0C7N1 319 aa16.5■□□□□ 0.23
COL18A1-202ENST00000355480 PPP3CBP16298 524 aa16.5■□□□□ 0.23
COL18A1-202ENST00000355480 CAPZBP47756 277 aa16.5■□□□□ 0.23
COL18A1-202ENST00000355480 NPY4RP50391 375 aa16.5■□□□□ 0.23
COL18A1-202ENST00000355480 ALKAL2Q6UX46 152 aa16.5■□□□□ 0.23
COL18A1-202ENST00000355480 PHYHIPQ92561 330 aa16.5■□□□□ 0.23
COL18A1-202ENST00000355480 MYH9P35579 1960 aaKnown RBP16.5■□□□□ 0.23
COL18A1-202ENST00000355480 APEX1P27695 318 aaKnown RBP16.5■□□□□ 0.23
COL18A1-202ENST00000355480 IAH1Q2TAA2 248 aaPredicted RBP16.5■□□□□ 0.23
COL18A1-202ENST00000355480 ST7LQ8TDW4 575 aa16.5■□□□□ 0.23
COL18A1-202ENST00000355480 BCO1Q9HAY6 547 aa16.5■□□□□ 0.23
COL18A1-202ENST00000355480 TIMM10BQ9Y5J6 103 aa16.5■□□□□ 0.23
COL18A1-202ENST00000355480 A0A1W2PPC4 97 aa16.5■□□□□ 0.23
COL18A1-202ENST00000355480 HBE1P02100 147 aa16.5■□□□□ 0.23
COL18A1-202ENST00000355480 BTG2P78543 158 aa16.5■□□□□ 0.23
COL18A1-202ENST00000355480 MDGA2Q7Z553 956 aa16.5■□□□□ 0.23
COL18A1-202ENST00000355480 SIAH3Q8IW03 269 aa16.5■□□□□ 0.23
COL18A1-202ENST00000355480 OR10J5Q8NHC4 309 aa16.5■□□□□ 0.23
COL18A1-202ENST00000355480 PUS1Q9Y606 427 aaKnown RBP eCLIP16.5■□□□□ 0.23
COL18A1-202ENST00000355480 STMND1H3BQB6 276 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms