RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 LYG2Q86SG7 212 aa11.7□□□□□ -0.54
SYNCRIP-201ENST00000355238 ANGPTL5Q86XS5 388 aa11.7□□□□□ -0.54
SYNCRIP-201ENST00000355238 ZNF595Q8IYB9 648 aa11.7□□□□□ -0.54
SYNCRIP-201ENST00000355238 ZNF610Q8N9Z0 462 aa11.7□□□□□ -0.54
SYNCRIP-201ENST00000355238 OR8D4Q8NGM9 314 aa11.7□□□□□ -0.54
SYNCRIP-201ENST00000355238 SHDQ96IW2 340 aa11.7□□□□□ -0.54
SYNCRIP-201ENST00000355238 GAS2L1Q99501 681 aaPredicted RBP11.7□□□□□ -0.54
SYNCRIP-201ENST00000355238 C8orf33Q9H7E9 229 aaPredicted RBP11.7□□□□□ -0.54
SYNCRIP-201ENST00000355238 DNAJB11Q9UBS4 358 aa11.7□□□□□ -0.54
SYNCRIP-201ENST00000355238 FITM1A5D6W6 292 aa11.7□□□□□ -0.54
SYNCRIP-201ENST00000355238 ADAMTS4O75173 837 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 SPP1P10451 314 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 NTSR1P30989 418 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 HOXA1P49639 335 aaPredicted RBP11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 BPIFCQ8NFQ6 507 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 FKRPQ9H9S5 495 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 HINT3Q9NQE9 182 aaKnown RBP11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 TRAPPC2LQ9UL33 140 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 HEPACAM2A8MVW5 462 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 TMEM189-UBE2V1I3L0A0 370 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 DTYMKP23919 212 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 GCH1P30793 250 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 PFN3P60673 137 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 PARS2Q7L3T8 475 aaKnown RBP11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 TMEM179BQ7Z7N9 219 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 MCATQ8IVS2 390 aaKnown RBP11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 MISPQ8IVT2 679 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 SUMF1Q8NBK3 374 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 WDR89Q96FK6 387 aaPredicted RBP11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 C2orf50Q96LR7 162 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 DCBLD2Q96PD2 775 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 HNRNPA2B1P22626 353 aaKnown RBP11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 IKZF1Q13422 519 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 PHLDA2Q53GA4 152 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 TMEM64Q6YI46 380 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 GLDNQ6ZMI3 551 aaPredicted RBP11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 HTR3DQ70Z44 454 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 CPEB2Q7Z5Q1 589 aaKnown RBP11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 FAM71CQ8NEG0 241 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 SMIM19Q96E16 107 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 KCNG2Q9UJ96 466 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 KIR2DS5A0A0G2JLQ3 304 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 A0A0G2JNG1 304 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 HSPB2A8KAH6 182 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 RNASEK-C17orf49H0YIS7 233 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 KIR2DS3K7RE56 304 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 SDHAP31040 664 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 KIR2DS5Q14953 304 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 RAB35Q15286 201 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 HSPB2Q16082 182 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 ARSJQ5FYB0 599 aaPredicted RBP11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 OR5AP2Q8NGF4 316 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 OR13D1Q8NGV5 346 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 OR4A16Q8NH70 328 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 TCTN2Q96GX1 697 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 KIRREL1Q96J84 757 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 CMTM3Q96MX0 182 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 A0A087WUU8 490 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 FXYD1O00168 92 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 ITGB8P26012 769 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 G0S2P27469 103 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 HOXD9P28356 352 aaPredicted RBP11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 OR10A3P58181 314 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 SEMA3BQ13214 749 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 MFAP5Q13361 173 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 IQCJQ1A5X6 159 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 IGSF11Q5DX21 431 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 LIPNQ5VXI9 398 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 ANKRD34AQ69YU3 496 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 PPP1R1CQ8WVI7 109 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 ULBP3Q9BZM4 244 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 MMP26Q9NRE1 261 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 SLC35D1Q9NTN3 355 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 CGGBP1Q9UFW8 167 aaPredicted RBP11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 GDF2Q9UK05 429 aaPredicted RBP11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 PADI1Q9ULC6 663 aa11.69□□□□□ -0.54
SYNCRIP-201ENST00000355238 MEIKINA0A087WXM9 373 aa11.68□□□□□ -0.54
SYNCRIP-201ENST00000355238 XRCC3O43542 346 aa11.68□□□□□ -0.54
SYNCRIP-201ENST00000355238 TSPAN12O95859 305 aa11.68□□□□□ -0.54
SYNCRIP-201ENST00000355238 PRPH2P23942 346 aa11.68□□□□□ -0.54
SYNCRIP-201ENST00000355238 MAP2K6P52564 334 aa11.68□□□□□ -0.54
SYNCRIP-201ENST00000355238 SNRPNP63162 240 aaKnown RBP11.68□□□□□ -0.54
SYNCRIP-201ENST00000355238 MFSD12Q6NUT3 480 aa11.68□□□□□ -0.54
SYNCRIP-201ENST00000355238 SLC48A1Q6P1K1 146 aa11.68□□□□□ -0.54
SYNCRIP-201ENST00000355238 EMG1Q92979 244 aaKnown RBP11.68□□□□□ -0.54
SYNCRIP-201ENST00000355238 SLC22A12Q96S37 553 aa11.68□□□□□ -0.54
SYNCRIP-201ENST00000355238 STRADBQ9C0K7 418 aa11.68□□□□□ -0.54
SYNCRIP-201ENST00000355238 ENKD1Q9H0I2 346 aa11.68□□□□□ -0.54
SYNCRIP-201ENST00000355238 TRAV1-2A0A0B4J238 106 aa11.68□□□□□ -0.54
SYNCRIP-201ENST00000355238 FZD9O00144 591 aa11.68□□□□□ -0.54
SYNCRIP-201ENST00000355238 CTSLP07711 333 aa11.68□□□□□ -0.54
SYNCRIP-201ENST00000355238 SFTA3P0C7M3 94 aa11.68□□□□□ -0.54
SYNCRIP-201ENST00000355238 ZNF90Q03938 601 aa11.68□□□□□ -0.54
SYNCRIP-201ENST00000355238 TCEAL8Q8IYN2 117 aa11.68□□□□□ -0.54
SYNCRIP-201ENST00000355238 MMP21Q8N119 569 aa11.68□□□□□ -0.54
SYNCRIP-201ENST00000355238 OR5D18Q8NGL1 313 aa11.68□□□□□ -0.54
SYNCRIP-201ENST00000355238 MRPL38Q96DV4 380 aaKnown RBP11.68□□□□□ -0.54
SYNCRIP-201ENST00000355238 PTDSS2Q9BVG9 487 aa11.68□□□□□ -0.54
SYNCRIP-201ENST00000355238 CRLF2Q9HC73 371 aa11.68□□□□□ -0.54
SYNCRIP-201ENST00000355238 SUSD2Q9UGT4 822 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms