RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 OR4K13Q8NH42 304 aa10.37□□□□□ -0.75
SNCA-202ENST00000345009 NSMAFQ92636 917 aa10.37□□□□□ -0.75
SNCA-202ENST00000345009 EME1Q96AY2 570 aa10.37□□□□□ -0.75
SNCA-202ENST00000345009 ZNF837Q96EG3 531 aaPredicted RBP10.37□□□□□ -0.75
SNCA-202ENST00000345009 PLEKHA8Q96JA3 519 aa10.37□□□□□ -0.75
SNCA-202ENST00000345009 SLC38A2Q96QD8 506 aa10.37□□□□□ -0.75
SNCA-202ENST00000345009 GRIP2Q9C0E4 1043 aa10.37□□□□□ -0.75
SNCA-202ENST00000345009 RERGLQ9H628 205 aa10.37□□□□□ -0.75
SNCA-202ENST00000345009 SEC61A2Q9H9S3 476 aa10.37□□□□□ -0.75
SNCA-202ENST00000345009 SIAEQ9HAT2 523 aa10.37□□□□□ -0.75
SNCA-202ENST00000345009 TMEM38BQ9NVV0 291 aa10.37□□□□□ -0.75
SNCA-202ENST00000345009 VSX1Q9NZR4 365 aaPredicted RBP10.37□□□□□ -0.75
SNCA-202ENST00000345009 REV1Q9UBZ9 1251 aa10.37□□□□□ -0.75
SNCA-202ENST00000345009 TACC2O95359 2948 aa10.37□□□□□ -0.75
SNCA-202ENST00000345009 ARPC4-TTLL3A0A0A6YYG9 625 aa10.36□□□□□ -0.75
SNCA-202ENST00000345009 SAC3D1A6NKF1 404 aa10.36□□□□□ -0.75
SNCA-202ENST00000345009 BHLHE40O14503 412 aa10.36□□□□□ -0.75
SNCA-202ENST00000345009 SLC16A7O60669 478 aa10.36□□□□□ -0.75
SNCA-202ENST00000345009 UBL3O95164 117 aa10.36□□□□□ -0.75
SNCA-202ENST00000345009 SLC2A10O95528 541 aa10.36□□□□□ -0.75
SNCA-202ENST00000345009 CD79AP11912 226 aa10.36□□□□□ -0.75
SNCA-202ENST00000345009 B4GALT1P15291 398 aa10.36□□□□□ -0.75
SNCA-202ENST00000345009 HIST1H1CP16403 213 aaKnown RBP10.36□□□□□ -0.75
SNCA-202ENST00000345009 ZNF3P17036 446 aa10.36□□□□□ -0.75
SNCA-202ENST00000345009 PTAFRP25105 342 aa10.36□□□□□ -0.75
SNCA-202ENST00000345009 GRK5P34947 590 aa10.36□□□□□ -0.75
SNCA-202ENST00000345009 ARR3P36575 388 aa10.36□□□□□ -0.75
SNCA-202ENST00000345009 CDKN2AP42771 156 aaKnown RBP10.36□□□□□ -0.75
SNCA-202ENST00000345009 CENPAP49450 140 aa10.36□□□□□ -0.75
SNCA-202ENST00000345009 DAPP51397 102 aa10.36□□□□□ -0.75
SNCA-202ENST00000345009 CRISP1P54107 249 aa10.36□□□□□ -0.75
SNCA-202ENST00000345009 RAD23AP54725 363 aa10.36□□□□□ -0.75
SNCA-202ENST00000345009 PCBD1P61457 104 aa10.36□□□□□ -0.75
SNCA-202ENST00000345009 TLE4Q04727 773 aa10.36□□□□□ -0.75
SNCA-202ENST00000345009 GINS1Q14691 196 aa10.36□□□□□ -0.75
SNCA-202ENST00000345009 SGCAQ16586 387 aa10.36□□□□□ -0.75
SNCA-202ENST00000345009 SLC35F1Q5T1Q4 408 aa10.36□□□□□ -0.75
SNCA-202ENST00000345009 KDM4DQ6B0I6 523 aa10.36□□□□□ -0.75
SNCA-202ENST00000345009 SLC25A47Q6Q0C1 308 aa10.36□□□□□ -0.75
SNCA-202ENST00000345009 ZBTB49Q6ZSB9 765 aa10.36□□□□□ -0.75
SNCA-202ENST00000345009 SLC16A14Q7RTX9 510 aa10.36□□□□□ -0.75
SNCA-202ENST00000345009 GLB1L2Q8IW92 636 aa10.36□□□□□ -0.75
SNCA-202ENST00000345009 FAM169BQ8N8A8 192 aa10.36□□□□□ -0.75
SNCA-202ENST00000345009 WDR31Q8NA23 367 aa10.36□□□□□ -0.75
SNCA-202ENST00000345009 IL17RDQ8NFM7 739 aa10.36□□□□□ -0.75
SNCA-202ENST00000345009 OR2T4Q8NH00 348 aa10.36□□□□□ -0.75
SNCA-202ENST00000345009 NMD3Q96D46 503 aaKnown RBP10.36□□□□□ -0.75
SNCA-202ENST00000345009 RADILQ96JH8 1075 aa10.36□□□□□ -0.75
SNCA-202ENST00000345009 NMNAT3Q96T66 252 aa10.36□□□□□ -0.75
SNCA-202ENST00000345009 KCNS3Q9BQ31 491 aa10.36□□□□□ -0.75
SNCA-202ENST00000345009 WACQ9BTA9 647 aa10.36□□□□□ -0.75
SNCA-202ENST00000345009 PLA2G12AQ9BZM1 189 aa10.36□□□□□ -0.75
SNCA-202ENST00000345009 SYT4Q9H2B2 425 aa10.36□□□□□ -0.75
SNCA-202ENST00000345009 NELFAQ9H3P2 528 aa10.36□□□□□ -0.75
SNCA-202ENST00000345009 DCLRE1BQ9H816 532 aa10.36□□□□□ -0.75
SNCA-202ENST00000345009 SLC25A15Q9Y619 301 aa10.36□□□□□ -0.75
SNCA-202ENST00000345009 ROS1P08922 2347 aa10.36□□□□□ -0.75
SNCA-202ENST00000345009 ABCA12Q86UK0 2595 aa10.36□□□□□ -0.75
SNCA-202ENST00000345009 SPG11Q96JI7 2443 aa10.36□□□□□ -0.75
SNCA-202ENST00000345009 PRR14LQ5THK1 2151 aa10.35□□□□□ -0.75
SNCA-202ENST00000345009 A0A1W2PPL8 197 aa10.35□□□□□ -0.75
SNCA-202ENST00000345009 C12orf71A8MTZ7 269 aa10.35□□□□□ -0.75
SNCA-202ENST00000345009 H7C1C5 153 aa10.35□□□□□ -0.75
SNCA-202ENST00000345009 RAB36O95755 333 aa10.35□□□□□ -0.75
SNCA-202ENST00000345009 PTHP01270 115 aa10.35□□□□□ -0.75
SNCA-202ENST00000345009 THBDP07204 575 aa10.35□□□□□ -0.75
SNCA-202ENST00000345009 CD3EP07766 207 aa10.35□□□□□ -0.75
SNCA-202ENST00000345009 VSIG8P0DPA2 414 aa10.35□□□□□ -0.75
SNCA-202ENST00000345009 MSR1P21757 451 aa10.35□□□□□ -0.75
SNCA-202ENST00000345009 LAP3P28838 519 aa10.35□□□□□ -0.75
SNCA-202ENST00000345009 ALDH3A2P51648 485 aa10.35□□□□□ -0.75
SNCA-202ENST00000345009 BLVRAP53004 296 aa10.35□□□□□ -0.75
SNCA-202ENST00000345009 LCN6P62502 163 aa10.35□□□□□ -0.75
SNCA-202ENST00000345009 GLO1Q04760 184 aa10.35□□□□□ -0.75
SNCA-202ENST00000345009 PLP2Q04941 152 aa10.35□□□□□ -0.75
SNCA-202ENST00000345009 FMODQ06828 376 aa10.35□□□□□ -0.75
SNCA-202ENST00000345009 DAG1Q14118 895 aa10.35□□□□□ -0.75
SNCA-202ENST00000345009 GSG1Q2KHT4 349 aa10.35□□□□□ -0.75
SNCA-202ENST00000345009 PGGHGQ32M88 737 aa10.35□□□□□ -0.75
SNCA-202ENST00000345009 C3orf36Q3SXR2 165 aa10.35□□□□□ -0.75
SNCA-202ENST00000345009 FAM27BQ5VT28 67 aa10.35□□□□□ -0.75
SNCA-202ENST00000345009 TMEM53Q6P2H8 277 aa10.35□□□□□ -0.75
SNCA-202ENST00000345009 PTCHD4Q6ZW05 846 aa10.35□□□□□ -0.75
SNCA-202ENST00000345009 TMEM200AQ86VY9 491 aa10.35□□□□□ -0.75
SNCA-202ENST00000345009 WDFY1Q8IWB7 410 aa10.35□□□□□ -0.75
SNCA-202ENST00000345009 OR8D4Q8NGM9 314 aa10.35□□□□□ -0.75
SNCA-202ENST00000345009 PIK3IP1Q96FE7 263 aa10.35□□□□□ -0.75
SNCA-202ENST00000345009 CIB1Q99828 191 aa10.35□□□□□ -0.75
SNCA-202ENST00000345009 NUAK2Q9H093 628 aa10.35□□□□□ -0.75
SNCA-202ENST00000345009 RNF121Q9H920 327 aa10.35□□□□□ -0.75
SNCA-202ENST00000345009 SRA1Q9HD15 236 aaKnown RBP10.35□□□□□ -0.75
SNCA-202ENST00000345009 CCNB1IP1Q9NPC3 277 aa10.35□□□□□ -0.75
SNCA-202ENST00000345009 C8orf4Q9NR00 106 aa10.35□□□□□ -0.75
SNCA-202ENST00000345009 CMC2Q9NRP2 79 aa10.35□□□□□ -0.75
SNCA-202ENST00000345009 FKBP7Q9Y680 259 aa10.35□□□□□ -0.75
SNCA-202ENST00000345009 CADP27708 2225 aa10.35□□□□□ -0.75
SNCA-202ENST00000345009 ITPR2Q14571 2701 aa10.34□□□□□ -0.75
SNCA-202ENST00000345009 A0A1W2PR80 420 aa10.34□□□□□ -0.75
SNCA-202ENST00000345009 M0R1B8 84 aa10.34□□□□□ -0.75
SNCA-202ENST00000345009 CTAG2O75638 210 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms