RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 STACQ99469 402 aa11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 PRRT1Q99946 306 aa11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 MCCC2Q9HCC0 563 aa11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 TDRD6O60522 2096 aaKnown RBP11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 ZNF236Q9UL36 1845 aa11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 TSPAN11A1L157 253 aa11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 OR5H14A6NHG9 310 aa11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 C4orf51C9J302 202 aa11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 ZGLP1P0C6A0 271 aa11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 CDKN2AP42771 156 aaKnown RBP11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 BAMBIQ13145 260 aa11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 ACKR1Q16570 336 aa11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 ARTNQ5T4W7 220 aa11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 MRM1Q6IN84 353 aaKnown RBP11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 TMPRSS11FQ6ZWK6 438 aa11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 RASGRP3Q8IV61 690 aa11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 GABRG1Q8N1C3 465 aa11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 SYS1Q8N2H4 156 aa11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 TSLPQ969D9 159 aa11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 CDC6Q99741 560 aa11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 SF3B6Q9Y3B4 125 aaKnown RBP11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 ICE1Q9Y2F5 2266 aa11.32□□□□□ -0.6
SNRNP48-201ENST00000342415 LILRB5O75023 590 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 STK17BO94768 372 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 RABIFP47224 123 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 VAMP2P63027 116 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 SNRPNP63162 240 aaKnown RBP11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 GPR139Q6DWJ6 353 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 OR2L13Q8N349 312 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 RNF215Q9Y6U7 377 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 SCN10AQ9Y5Y9 1956 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 LOC100289279A0A1B0GTE1 492 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 EFCAB7A8K855 629 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 SDCBPO00560 298 aaPredicted RBP11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 BHLHE40O14503 412 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 ZNF254O75437 659 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 SERPINA5P05154 406 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 ZNF16P17020 682 aaPredicted RBP11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 ZNF43P17038 809 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 POU3F2P20265 443 aaPredicted RBP11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 EPHA4P54764 986 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 MFSD13AQ14CX5 517 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 STK11Q15831 433 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 CLPPQ16740 277 aaPredicted RBP11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 MUC20Q8N307 709 aaPredicted RBP11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 OR1J4Q8NGS1 313 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 OR4K15Q8NH41 348 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 KTI12Q96EK9 354 aaPredicted RBP11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 DZANK1Q9NVP4 752 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 MED29Q9NX70 200 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 TAS2R5Q9NYW4 299 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 FLRT3Q9NZU0 649 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 PLXNA1Q9UIW2 1896 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 RIF1Q5UIP0 2472 aaKnown RBP11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 KIR2DS5A0A0G2JLQ3 304 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 A0A0G2JNG1 304 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 A0A1B0GUH1 482 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 KIR2DS3K7RE56 304 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 TXNL1O43396 289 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 MOSPD3O75425 235 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 TPT1P13693 172 aaKnown RBP11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 RAB3AP20336 220 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 PMPCAQ10713 525 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 RBM39Q14498 530 aaKnown RBP11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 KIR2DS5Q14953 304 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 PLA1AQ53H76 456 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 OR52W1Q6IF63 320 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 PRSS42Q7Z5A4 293 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 ANGPTL5Q86XS5 388 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 CA13Q8N1Q1 262 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 OR5D14Q8NGL3 314 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 HAVCR2Q8TDQ0 301 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 MOGAT1Q96PD6 335 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 GAS2L1Q99501 681 aaPredicted RBP11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 NTMQ9P121 344 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 GMEB2Q9UKD1 530 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 KCNIP3Q9Y2W7 256 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 TP53BP1Q12888 1972 aaPredicted RBP11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 GGT3PA6NGU5 568 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 C4orf47A7E2U8 309 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 D6RAR5 112 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 TSPAN15O95858 294 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 UBE2IP63279 158 aaKnown RBP11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 SGCBQ16585 318 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 CLLU1Q5K131 121 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 TMEM244Q5VVB8 128 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 RAET1LQ5VY80 246 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 MEX3BQ6ZN04 569 aaKnown RBP11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 ZNF679Q8IYX0 411 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 DND1Q8IYX4 353 aaKnown RBP11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 MIB2Q96AX9 1013 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 CMBLQ96DG6 245 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 OR2A5Q96R48 311 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 DEFB126Q9BYW3 111 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 EHFQ9NZC4 300 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 ACAD8Q9UKU7 415 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 MOKQ9UQ07 419 aa11.31□□□□□ -0.6
SNRNP48-201ENST00000342415 A0A0B4J2E0 115 aa11.3□□□□□ -0.6
SNRNP48-201ENST00000342415 A0A1B0GX12 115 aa11.3□□□□□ -0.6
SNRNP48-201ENST00000342415 G3V3Y1 287 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms