RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 UTS2O95399 124 aa13.03□□□□□ -0.32
CPSF7-201ENST00000340437 VAMP1P23763 118 aa13.03□□□□□ -0.32
CPSF7-201ENST00000340437 GNALP38405 381 aa13.03□□□□□ -0.32
CPSF7-201ENST00000340437 DNASE1L1P49184 302 aa13.03□□□□□ -0.32
CPSF7-201ENST00000340437 NR0B1P51843 470 aaKnown RBP13.03□□□□□ -0.32
CPSF7-201ENST00000340437 ELFN2Q5R3F8 820 aa13.03□□□□□ -0.32
CPSF7-201ENST00000340437 NKAIN2Q5VXU1 208 aa13.03□□□□□ -0.32
CPSF7-201ENST00000340437 TMEM184AQ6ZMB5 413 aa13.03□□□□□ -0.32
CPSF7-201ENST00000340437 GRAMD2AQ8IUY3 354 aa13.03□□□□□ -0.32
CPSF7-201ENST00000340437 C19orf47Q8N9M1 422 aaKnown RBP13.03□□□□□ -0.32
CPSF7-201ENST00000340437 OR51A2Q8NGJ7 313 aa13.03□□□□□ -0.32
CPSF7-201ENST00000340437 LMF2Q9BU23 707 aaKnown RBP13.03□□□□□ -0.32
CPSF7-201ENST00000340437 NMNAT2Q9BZQ4 307 aa13.03□□□□□ -0.32
CPSF7-201ENST00000340437 POLE3Q9NRF9 147 aa13.03□□□□□ -0.32
CPSF7-201ENST00000340437 DHCR7Q9UBM7 475 aaKnown RBP13.03□□□□□ -0.32
CPSF7-201ENST00000340437 MTFP1Q9UDX5 166 aa13.03□□□□□ -0.32
CPSF7-201ENST00000340437 KIF26BQ2KJY2 2108 aa13.02□□□□□ -0.32
CPSF7-201ENST00000340437 OR5K3A6NET4 321 aa13.02□□□□□ -0.32
CPSF7-201ENST00000340437 SOX1O00570 391 aaPredicted RBP13.02□□□□□ -0.32
CPSF7-201ENST00000340437 ZNF264O43296 627 aa13.02□□□□□ -0.32
CPSF7-201ENST00000340437 PNPP00491 289 aa13.02□□□□□ -0.32
CPSF7-201ENST00000340437 HOXD4P09016 255 aaPredicted RBP13.02□□□□□ -0.32
CPSF7-201ENST00000340437 THEGLP0DJG4 465 aa13.02□□□□□ -0.32
CPSF7-201ENST00000340437 KIR3DL2P43630 455 aa13.02□□□□□ -0.32
CPSF7-201ENST00000340437 EGR4Q05215 589 aa13.02□□□□□ -0.32
CPSF7-201ENST00000340437 ZNF141Q15928 474 aa13.02□□□□□ -0.32
CPSF7-201ENST00000340437 RHOUQ7L0Q8 258 aa13.02□□□□□ -0.32
CPSF7-201ENST00000340437 GPAT4Q86UL3 456 aa13.02□□□□□ -0.32
CPSF7-201ENST00000340437 CMBLQ96DG6 245 aa13.02□□□□□ -0.32
CPSF7-201ENST00000340437 PLEKHA1Q9HB21 404 aa13.02□□□□□ -0.32
CPSF7-201ENST00000340437 TAS2R3Q9NYW6 316 aa13.02□□□□□ -0.32
CPSF7-201ENST00000340437 FANCMQ8IYD8 2048 aa13.02□□□□□ -0.32
CPSF7-201ENST00000340437 PTPRSQ13332 1948 aa13.02□□□□□ -0.32
CPSF7-201ENST00000340437 TMEM235A6NFC5 223 aa13.02□□□□□ -0.33
CPSF7-201ENST00000340437 FOXS1O43638 330 aa13.02□□□□□ -0.33
CPSF7-201ENST00000340437 SULT1B1O43704 296 aa13.02□□□□□ -0.33
CPSF7-201ENST00000340437 FBXW4P57775 412 aa13.02□□□□□ -0.33
CPSF7-201ENST00000340437 CORO6Q6QEF8 472 aa13.02□□□□□ -0.33
CPSF7-201ENST00000340437 ATRAIDQ6UW56 229 aa13.02□□□□□ -0.33
CPSF7-201ENST00000340437 BIVMQ86UB2 503 aa13.02□□□□□ -0.33
CPSF7-201ENST00000340437 SLC22A18ASQ8N1D0 253 aa13.02□□□□□ -0.33
CPSF7-201ENST00000340437 GALNT16Q8N428 558 aa13.02□□□□□ -0.33
CPSF7-201ENST00000340437 GPR119Q8TDV5 335 aa13.02□□□□□ -0.33
CPSF7-201ENST00000340437 FBXW5Q969U6 566 aa13.02□□□□□ -0.33
CPSF7-201ENST00000340437 SCARF2Q96GP6 870 aaPredicted RBP13.02□□□□□ -0.33
CPSF7-201ENST00000340437 UBQLN4Q9NRR5 601 aa13.02□□□□□ -0.33
CPSF7-201ENST00000340437 VPS13AQ96RL7 3174 aa13.02□□□□□ -0.33
CPSF7-201ENST00000340437 C13orf42A0A1B0GVH6 325 aa13.02□□□□□ -0.33
CPSF7-201ENST00000340437 ICOSLGO75144 302 aa13.02□□□□□ -0.33
CPSF7-201ENST00000340437 EIF2B1Q14232 305 aaKnown RBP13.02□□□□□ -0.33
CPSF7-201ENST00000340437 CSRP2Q16527 193 aa13.02□□□□□ -0.33
CPSF7-201ENST00000340437 SEZ6L2Q6UXD5 910 aa13.02□□□□□ -0.33
CPSF7-201ENST00000340437 SPICQ8N5J4 248 aa13.02□□□□□ -0.33
CPSF7-201ENST00000340437 STEAP2Q8NFT2 490 aa13.02□□□□□ -0.33
CPSF7-201ENST00000340437 RNF166Q96A37 237 aaPredicted RBP13.02□□□□□ -0.33
CPSF7-201ENST00000340437 SLC25A44Q96H78 314 aaPredicted RBP13.02□□□□□ -0.33
CPSF7-201ENST00000340437 OR2M5A3KFT3 312 aa13.01□□□□□ -0.33
CPSF7-201ENST00000340437 EEF1E1-BLOC1S5C9J1V9 151 aa13.01□□□□□ -0.33
CPSF7-201ENST00000340437 CSF1P09603 554 aa13.01□□□□□ -0.33
CPSF7-201ENST00000340437 MYF5P13349 255 aa13.01□□□□□ -0.33
CPSF7-201ENST00000340437 GABRA1P14867 456 aa13.01□□□□□ -0.33
CPSF7-201ENST00000340437 ALOX5APP20292 161 aa13.01□□□□□ -0.33
CPSF7-201ENST00000340437 GFERP55789 205 aa13.01□□□□□ -0.33
CPSF7-201ENST00000340437 CDNFQ49AH0 187 aa13.01□□□□□ -0.33
CPSF7-201ENST00000340437 HLA-DQA1Q5Y7H0 255 aa13.01□□□□□ -0.33
CPSF7-201ENST00000340437 SCARB1Q8WTV0 552 aa13.01□□□□□ -0.33
CPSF7-201ENST00000340437 LMX1BO60663 402 aa13.01□□□□□ -0.33
CPSF7-201ENST00000340437 SEMA4FO95754 770 aa13.01□□□□□ -0.33
CPSF7-201ENST00000340437 WNT11O96014 354 aa13.01□□□□□ -0.33
CPSF7-201ENST00000340437 IL12BP29460 328 aa13.01□□□□□ -0.33
CPSF7-201ENST00000340437 CTHP32929 405 aa13.01□□□□□ -0.33
CPSF7-201ENST00000340437 GPR3P46089 330 aa13.01□□□□□ -0.33
CPSF7-201ENST00000340437 MFGE8Q08431 387 aaPredicted RBP13.01□□□□□ -0.33
CPSF7-201ENST00000340437 OLFML2AQ68BL7 652 aa13.01□□□□□ -0.33
CPSF7-201ENST00000340437 RGS7BPQ6MZT1 257 aaPredicted RBP13.01□□□□□ -0.33
CPSF7-201ENST00000340437 C16orf47Q6ZP98 133 aaPredicted RBP13.01□□□□□ -0.33
CPSF7-201ENST00000340437 KCTD20Q7Z5Y7 419 aa13.01□□□□□ -0.33
CPSF7-201ENST00000340437 C12orf45Q8N5I9 185 aaPredicted RBP13.01□□□□□ -0.33
CPSF7-201ENST00000340437 OR1J2Q8NGS2 313 aa13.01□□□□□ -0.33
CPSF7-201ENST00000340437 SLC38A3Q99624 504 aa13.01□□□□□ -0.33
CPSF7-201ENST00000340437 APMAPQ9HDC9 416 aa13.01□□□□□ -0.33
CPSF7-201ENST00000340437 MSRAQ9UJ68 235 aa13.01□□□□□ -0.33
CPSF7-201ENST00000340437 MRTO4Q9UKD2 239 aaKnown RBP13.01□□□□□ -0.33
CPSF7-201ENST00000340437 EMC9Q9Y3B6 208 aa13.01□□□□□ -0.33
CPSF7-201ENST00000340437 PIAS3Q9Y6X2 628 aa13.01□□□□□ -0.33
CPSF7-201ENST00000340437 TMEM82A0PJX8 343 aa13.01□□□□□ -0.33
CPSF7-201ENST00000340437 SLC22A23A1A5C7 686 aa13.01□□□□□ -0.33
CPSF7-201ENST00000340437 LUMP51884 338 aaPredicted RBP13.01□□□□□ -0.33
CPSF7-201ENST00000340437 KLHL26Q53HC5 615 aa13.01□□□□□ -0.33
CPSF7-201ENST00000340437 C1orf189Q5VU69 101 aa13.01□□□□□ -0.33
CPSF7-201ENST00000340437 CDC20BQ86Y33 519 aa13.01□□□□□ -0.33
CPSF7-201ENST00000340437 GABRG1Q8N1C3 465 aa13.01□□□□□ -0.33
CPSF7-201ENST00000340437 OR10K1Q8NGX5 313 aa13.01□□□□□ -0.33
CPSF7-201ENST00000340437 ST8SIA2Q92186 375 aa13.01□□□□□ -0.33
CPSF7-201ENST00000340437 PHYHIPQ92561 330 aa13.01□□□□□ -0.33
CPSF7-201ENST00000340437 PNPLA2Q96AD5 504 aa13.01□□□□□ -0.33
CPSF7-201ENST00000340437 ZNF75AQ96N20 296 aa13.01□□□□□ -0.33
CPSF7-201ENST00000340437 DCBLD2Q96PD2 775 aa13.01□□□□□ -0.33
CPSF7-201ENST00000340437 SPACA5Q96QH8 159 aa13.01□□□□□ -0.33
CPSF7-201ENST00000340437 TBL1XR1Q9BZK7 514 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms