RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 HIVEP2P31629 2446 aa11.52□□□□□ -0.56
SIRPB3P-201ENST00000340424 hCG_2039718K7EN88 272 aa11.52□□□□□ -0.57
SIRPB3P-201ENST00000340424 AHCYL1O43865 530 aa11.52□□□□□ -0.57
SIRPB3P-201ENST00000340424 H1F0P07305 194 aaKnown RBP11.52□□□□□ -0.57
SIRPB3P-201ENST00000340424 MAKP20794 623 aa11.52□□□□□ -0.57
SIRPB3P-201ENST00000340424 GUCA1AP43080 201 aaPredicted RBP11.52□□□□□ -0.57
SIRPB3P-201ENST00000340424 SMIM11AP58511 58 aa11.52□□□□□ -0.57
SIRPB3P-201ENST00000340424 CTXN1P60606 82 aa11.52□□□□□ -0.57
SIRPB3P-201ENST00000340424 PLP2Q04941 152 aa11.52□□□□□ -0.57
SIRPB3P-201ENST00000340424 LOXL1Q08397 574 aaPredicted RBP11.52□□□□□ -0.57
SIRPB3P-201ENST00000340424 CD47Q08722 323 aa11.52□□□□□ -0.57
SIRPB3P-201ENST00000340424 KRT80Q6KB66 452 aa11.52□□□□□ -0.57
SIRPB3P-201ENST00000340424 ZNF525Q8N782 197 aa11.52□□□□□ -0.57
SIRPB3P-201ENST00000340424 OR1J2Q8NGS2 313 aa11.52□□□□□ -0.57
SIRPB3P-201ENST00000340424 SLC7A13Q8TCU3 470 aa11.52□□□□□ -0.57
SIRPB3P-201ENST00000340424 C10orf105Q8TEF2 133 aa11.52□□□□□ -0.57
SIRPB3P-201ENST00000340424 NEU4Q8WWR8 484 aaPredicted RBP11.52□□□□□ -0.57
SIRPB3P-201ENST00000340424 NMD3Q96D46 503 aaKnown RBP11.52□□□□□ -0.57
SIRPB3P-201ENST00000340424 RSRC1Q96IZ7 334 aaKnown RBP11.52□□□□□ -0.57
SIRPB3P-201ENST00000340424 RNPEPL1Q9HAU8 725 aa11.52□□□□□ -0.57
SIRPB3P-201ENST00000340424 ARFGEF3Q5TH69 2177 aa11.51□□□□□ -0.57
SIRPB3P-201ENST00000340424 TLN2Q9Y4G6 2542 aa11.51□□□□□ -0.57
SIRPB3P-201ENST00000340424 IGHV4-30-2A0A087WSY4 118 aa11.51□□□□□ -0.57
SIRPB3P-201ENST00000340424 TRAV27A0A087WT01 109 aa11.51□□□□□ -0.57
SIRPB3P-201ENST00000340424 IQCMA0A1B0GVH7 501 aa11.51□□□□□ -0.57
SIRPB3P-201ENST00000340424 LOC390937A0A1W2PQ73 354 aa11.51□□□□□ -0.57
SIRPB3P-201ENST00000340424 TLX2O43763 284 aaPredicted RBP11.51□□□□□ -0.57
SIRPB3P-201ENST00000340424 SNAP29O95721 258 aa11.51□□□□□ -0.57
SIRPB3P-201ENST00000340424 CD14P08571 375 aa11.51□□□□□ -0.57
SIRPB3P-201ENST00000340424 PDLIM4P50479 330 aa11.51□□□□□ -0.57
SIRPB3P-201ENST00000340424 TOP3AQ13472 1001 aaPredicted RBP11.51□□□□□ -0.57
SIRPB3P-201ENST00000340424 RAB39AQ14964 217 aa11.51□□□□□ -0.57
SIRPB3P-201ENST00000340424 TBC1D28Q2M2D7 210 aa11.51□□□□□ -0.57
SIRPB3P-201ENST00000340424 ZBED5Q49AG3 693 aa11.51□□□□□ -0.57
SIRPB3P-201ENST00000340424 Q71RC1 249 aaPredicted RBP11.51□□□□□ -0.57
SIRPB3P-201ENST00000340424 ZNF584Q8IVC4 421 aa11.51□□□□□ -0.57
SIRPB3P-201ENST00000340424 LRRC75AQ8NAA5 344 aa11.51□□□□□ -0.57
SIRPB3P-201ENST00000340424 ZNF540Q8NDQ6 660 aa11.51□□□□□ -0.57
SIRPB3P-201ENST00000340424 RBM15BQ8NDT2 890 aaKnown RBP11.51□□□□□ -0.57
SIRPB3P-201ENST00000340424 SLC30A7Q8NEW0 376 aa11.51□□□□□ -0.57
SIRPB3P-201ENST00000340424 OR51A7Q8NH64 312 aa11.51□□□□□ -0.57
SIRPB3P-201ENST00000340424 ZNF519Q8TB69 540 aa11.51□□□□□ -0.57
SIRPB3P-201ENST00000340424 HDAC2Q92769 488 aaKnown RBP11.51□□□□□ -0.57
SIRPB3P-201ENST00000340424 MRPL24Q96A35 216 aaKnown RBP11.51□□□□□ -0.57
SIRPB3P-201ENST00000340424 MCUR1Q96AQ8 359 aa11.51□□□□□ -0.57
SIRPB3P-201ENST00000340424 C7orf34Q96L11 122 aa11.51□□□□□ -0.57
SIRPB3P-201ENST00000340424 DHRS1Q96LJ7 313 aa11.51□□□□□ -0.57
SIRPB3P-201ENST00000340424 NSMCE2Q96MF7 247 aa11.51□□□□□ -0.57
SIRPB3P-201ENST00000340424 SORCS2Q96PQ0 1159 aa11.51□□□□□ -0.57
SIRPB3P-201ENST00000340424 DOK1Q99704 481 aa11.51□□□□□ -0.57
SIRPB3P-201ENST00000340424 SH3GL3Q99963 347 aa11.51□□□□□ -0.57
SIRPB3P-201ENST00000340424 VRK1Q99986 396 aaPredicted RBP11.51□□□□□ -0.57
SIRPB3P-201ENST00000340424 RNF121Q9H920 327 aa11.51□□□□□ -0.57
SIRPB3P-201ENST00000340424 DYNLRB1Q9NP97 96 aa11.51□□□□□ -0.57
SIRPB3P-201ENST00000340424 GRHPRQ9UBQ7 328 aa11.51□□□□□ -0.57
SIRPB3P-201ENST00000340424 CD300AQ9UGN4 299 aa11.51□□□□□ -0.57
SIRPB3P-201ENST00000340424 XKRYO14609 159 aa11.5□□□□□ -0.57
SIRPB3P-201ENST00000340424 CD5LO43866 347 aa11.5□□□□□ -0.57
SIRPB3P-201ENST00000340424 CALB2P22676 271 aa11.5□□□□□ -0.57
SIRPB3P-201ENST00000340424 PCSK6P29122 969 aa11.5□□□□□ -0.57
SIRPB3P-201ENST00000340424 RPL4P36578 427 aaKnown RBP11.5□□□□□ -0.57
SIRPB3P-201ENST00000340424 GPR4P46093 362 aa11.5□□□□□ -0.57
SIRPB3P-201ENST00000340424 PCBD1P61457 104 aa11.5□□□□□ -0.57
SIRPB3P-201ENST00000340424 MXRA7P84157 204 aa11.5□□□□□ -0.57
SIRPB3P-201ENST00000340424 MYBPC1Q00872 1141 aa11.5□□□□□ -0.57
SIRPB3P-201ENST00000340424 FHL1Q13642 323 aa11.5□□□□□ -0.57
SIRPB3P-201ENST00000340424 FGD3Q5JSP0 725 aa11.5□□□□□ -0.57
SIRPB3P-201ENST00000340424 FAM27BQ5VT28 67 aa11.5□□□□□ -0.57
SIRPB3P-201ENST00000340424 PODNL1Q6PEZ8 512 aa11.5□□□□□ -0.57
SIRPB3P-201ENST00000340424 SLC25A47Q6Q0C1 308 aa11.5□□□□□ -0.57
SIRPB3P-201ENST00000340424 TBPL2Q6SJ96 375 aa11.5□□□□□ -0.57
SIRPB3P-201ENST00000340424 UNQ6126/PRO20091Q6UXV3 157 aa11.5□□□□□ -0.57
SIRPB3P-201ENST00000340424 TSEN54Q7Z6J9 526 aaKnown RBP11.5□□□□□ -0.57
SIRPB3P-201ENST00000340424 C1orf174Q8IYL3 243 aa11.5□□□□□ -0.57
SIRPB3P-201ENST00000340424 ARHGAP24Q8N264 748 aa11.5□□□□□ -0.57
SIRPB3P-201ENST00000340424 SVOPLQ8N434 492 aa11.5□□□□□ -0.57
SIRPB3P-201ENST00000340424 RNF148Q8N7C7 305 aa11.5□□□□□ -0.57
SIRPB3P-201ENST00000340424 ARIH2OSQ8N7S6 290 aa11.5□□□□□ -0.57
SIRPB3P-201ENST00000340424 OR13C2Q8NGS9 318 aa11.5□□□□□ -0.57
SIRPB3P-201ENST00000340424 POP5Q969H6 163 aaKnown RBP11.5□□□□□ -0.57
SIRPB3P-201ENST00000340424 PYURFQ96I23 114 aa11.5□□□□□ -0.57
SIRPB3P-201ENST00000340424 TSPAN32Q96QS1 320 aa11.5□□□□□ -0.57
SIRPB3P-201ENST00000340424 TNFRSF13CQ96RJ3 184 aa11.5□□□□□ -0.57
SIRPB3P-201ENST00000340424 CDRT15Q96T59 188 aa11.5□□□□□ -0.57
SIRPB3P-201ENST00000340424 PIMREGQ9BSJ6 248 aa11.5□□□□□ -0.57
SIRPB3P-201ENST00000340424 WACQ9BTA9 647 aa11.5□□□□□ -0.57
SIRPB3P-201ENST00000340424 MS4A5Q9H3V2 200 aa11.5□□□□□ -0.57
SIRPB3P-201ENST00000340424 CDH20Q9HBT6 801 aa11.5□□□□□ -0.57
SIRPB3P-201ENST00000340424 CCNB1IP1Q9NPC3 277 aa11.5□□□□□ -0.57
SIRPB3P-201ENST00000340424 ARL8BQ9NVJ2 186 aa11.5□□□□□ -0.57
SIRPB3P-201ENST00000340424 GPR160Q9UJ42 338 aa11.5□□□□□ -0.57
SIRPB3P-201ENST00000340424 ZNF346Q9UL40 294 aaKnown RBP11.5□□□□□ -0.57
SIRPB3P-201ENST00000340424 UGT2A1Q9Y4X1 527 aa11.5□□□□□ -0.57
SIRPB3P-201ENST00000340424 NAV3Q8IVL0 2385 aa11.5□□□□□ -0.57
SIRPB3P-201ENST00000340424 ANK3Q12955 4377 aaKnown RBP11.5□□□□□ -0.57
SIRPB3P-201ENST00000340424 CSPG4Q6UVK1 2322 aa11.49□□□□□ -0.57
SIRPB3P-201ENST00000340424 A0A096LNT2 108 aa11.49□□□□□ -0.57
SIRPB3P-201ENST00000340424 TMEM129A0AVI4 362 aa11.49□□□□□ -0.57
SIRPB3P-201ENST00000340424 M0R233 179 aa11.49□□□□□ -0.57
SIRPB3P-201ENST00000340424 CDC42EP2O14613 210 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms