RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 TP53I3Q53FA7 332 aa13.07□□□□□ -0.32
CDK5RAP3-201ENST00000338399 SLC16A12Q6ZSM3 486 aa13.07□□□□□ -0.32
CDK5RAP3-201ENST00000338399 ZNF420Q8TAQ5 688 aaPredicted RBP13.07□□□□□ -0.32
CDK5RAP3-201ENST00000338399 SNX33Q8WV41 574 aa13.07□□□□□ -0.32
CDK5RAP3-201ENST00000338399 SARAFQ96BY9 339 aa13.07□□□□□ -0.32
CDK5RAP3-201ENST00000338399 C12orf43Q96C57 262 aaKnown RBP13.07□□□□□ -0.32
CDK5RAP3-201ENST00000338399 KCNG2Q9UJ96 466 aa13.07□□□□□ -0.32
CDK5RAP3-201ENST00000338399 ENPP5Q9UJA9 477 aa13.07□□□□□ -0.32
CDK5RAP3-201ENST00000338399 LAMP5Q9UJQ1 280 aa13.07□□□□□ -0.32
CDK5RAP3-201ENST00000338399 FOXD3Q9UJU5 478 aaPredicted RBP13.07□□□□□ -0.32
CDK5RAP3-201ENST00000338399 ZMIZ1Q9ULJ6 1067 aa13.07□□□□□ -0.32
CDK5RAP3-201ENST00000338399 CLEC4AQ9UMR7 237 aa13.07□□□□□ -0.32
CDK5RAP3-201ENST00000338399 PSMD9O00233 223 aa13.06□□□□□ -0.32
CDK5RAP3-201ENST00000338399 GPR171O14626 319 aa13.06□□□□□ -0.32
CDK5RAP3-201ENST00000338399 MT-ND5P03915 603 aa13.06□□□□□ -0.32
CDK5RAP3-201ENST00000338399 SPARCP09486 303 aa13.06□□□□□ -0.32
CDK5RAP3-201ENST00000338399 GAAP10253 952 aa13.06□□□□□ -0.32
CDK5RAP3-201ENST00000338399 NR2C1P13056 603 aa13.06□□□□□ -0.32
CDK5RAP3-201ENST00000338399 ZNF823P16415 610 aa13.06□□□□□ -0.32
CDK5RAP3-201ENST00000338399 CALRP27797 417 aaKnown RBP13.06□□□□□ -0.32
CDK5RAP3-201ENST00000338399 LAP3P28838 519 aa13.06□□□□□ -0.32
CDK5RAP3-201ENST00000338399 ENTPD1P49961 510 aa13.06□□□□□ -0.32
CDK5RAP3-201ENST00000338399 TMBIM6P55061 237 aa13.06□□□□□ -0.32
CDK5RAP3-201ENST00000338399 CNPY1Q3B7I2 92 aa13.06□□□□□ -0.32
CDK5RAP3-201ENST00000338399 C11orf91Q3C1V1 193 aa13.06□□□□□ -0.32
CDK5RAP3-201ENST00000338399 CDONQ4KMG0 1287 aa13.06□□□□□ -0.32
CDK5RAP3-201ENST00000338399 LIPKQ5VXJ0 399 aa13.06□□□□□ -0.32
CDK5RAP3-201ENST00000338399 P2RY8Q86VZ1 359 aa13.06□□□□□ -0.32
CDK5RAP3-201ENST00000338399 TUSC5Q8IXB3 177 aa13.06□□□□□ -0.32
CDK5RAP3-201ENST00000338399 C20orf196Q8IYI0 205 aa13.06□□□□□ -0.32
CDK5RAP3-201ENST00000338399 ZFP41Q8N8Y5 198 aa13.06□□□□□ -0.32
CDK5RAP3-201ENST00000338399 THEM6Q8WUY1 208 aa13.06□□□□□ -0.32
CDK5RAP3-201ENST00000338399 INTS12Q96CB8 462 aaKnown RBP13.06□□□□□ -0.32
CDK5RAP3-201ENST00000338399 SPENQ96T58 3664 aaKnown RBP13.06□□□□□ -0.32
CDK5RAP3-201ENST00000338399 SEC61A2Q9H9S3 476 aa13.06□□□□□ -0.32
CDK5RAP3-201ENST00000338399 SLC24A3Q9HC58 644 aa13.06□□□□□ -0.32
CDK5RAP3-201ENST00000338399 ISYNA1Q9NPH2 558 aa13.06□□□□□ -0.32
CDK5RAP3-201ENST00000338399 BABAM2Q9NXR7 383 aa13.06□□□□□ -0.32
CDK5RAP3-201ENST00000338399 NOSIPQ9Y314 301 aaKnown RBP13.06□□□□□ -0.32
CDK5RAP3-201ENST00000338399 PRR32B1ATL7 298 aa13.06□□□□□ -0.32
CDK5RAP3-201ENST00000338399 H3BMQ9 156 aa13.06□□□□□ -0.32
CDK5RAP3-201ENST00000338399 NOL3O60936 208 aaKnown RBP13.06□□□□□ -0.32
CDK5RAP3-201ENST00000338399 SLC43A1O75387 559 aa13.06□□□□□ -0.32
CDK5RAP3-201ENST00000338399 TGM6O95932 706 aa13.06□□□□□ -0.32
CDK5RAP3-201ENST00000338399 CPEP16870 476 aa13.06□□□□□ -0.32
CDK5RAP3-201ENST00000338399 ALOX5APP20292 161 aa13.06□□□□□ -0.32
CDK5RAP3-201ENST00000338399 CDAP32320 146 aa13.06□□□□□ -0.32
CDK5RAP3-201ENST00000338399 ACTA2P62736 377 aa13.06□□□□□ -0.32
CDK5RAP3-201ENST00000338399 ACTG2P63267 376 aa13.06□□□□□ -0.32
CDK5RAP3-201ENST00000338399 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.06□□□□□ -0.32
CDK5RAP3-201ENST00000338399 OR5M9Q8NGP3 310 aa13.06□□□□□ -0.32
CDK5RAP3-201ENST00000338399 OTOSQ8NHW6 89 aa13.06□□□□□ -0.32
CDK5RAP3-201ENST00000338399 C11orf40Q8WZ69 217 aa13.06□□□□□ -0.32
CDK5RAP3-201ENST00000338399 TMEM45BQ96B21 275 aa13.06□□□□□ -0.32
CDK5RAP3-201ENST00000338399 MNTQ99583 582 aa13.06□□□□□ -0.32
CDK5RAP3-201ENST00000338399 CALHM2Q9HA72 323 aa13.06□□□□□ -0.32
CDK5RAP3-201ENST00000338399 EMC3Q9P0I2 261 aa13.06□□□□□ -0.32
CDK5RAP3-201ENST00000338399 GNG8Q9UK08 70 aa13.06□□□□□ -0.32
CDK5RAP3-201ENST00000338399 SVILO95425 2214 aa13.05□□□□□ -0.32
CDK5RAP3-201ENST00000338399 BSNQ9UPA5 3926 aa13.05□□□□□ -0.32
CDK5RAP3-201ENST00000338399 GTF3C1Q12789 2109 aa13.05□□□□□ -0.32
CDK5RAP3-201ENST00000338399 BOD1L1Q8NFC6 3051 aa13.05□□□□□ -0.32
CDK5RAP3-201ENST00000338399 CACNA1CQ13936 2221 aa13.05□□□□□ -0.32
CDK5RAP3-201ENST00000338399 SLC22A20A6NK97 555 aa13.05□□□□□ -0.32
CDK5RAP3-201ENST00000338399 UPK3AO75631 287 aa13.05□□□□□ -0.32
CDK5RAP3-201ENST00000338399 GADD45AP24522 165 aa13.05□□□□□ -0.32
CDK5RAP3-201ENST00000338399 LSM3P62310 102 aaKnown RBP13.05□□□□□ -0.32
CDK5RAP3-201ENST00000338399 ACSM1Q08AH1 577 aa13.05□□□□□ -0.32
CDK5RAP3-201ENST00000338399 RNPS1Q15287 305 aaKnown RBP13.05□□□□□ -0.32
CDK5RAP3-201ENST00000338399 C10orf128Q5T292 105 aa13.05□□□□□ -0.32
CDK5RAP3-201ENST00000338399 FAM180AQ6UWF9 173 aa13.05□□□□□ -0.32
CDK5RAP3-201ENST00000338399 VASH1Q7L8A9 365 aaPredicted RBP13.05□□□□□ -0.32
CDK5RAP3-201ENST00000338399 ATCAYQ86WG3 371 aa13.05□□□□□ -0.32
CDK5RAP3-201ENST00000338399 MCEMP1Q8IX19 187 aa13.05□□□□□ -0.32
CDK5RAP3-201ENST00000338399 PHC2Q8IXK0 858 aa13.05□□□□□ -0.32
CDK5RAP3-201ENST00000338399 SYS1Q8N2H4 156 aa13.05□□□□□ -0.32
CDK5RAP3-201ENST00000338399 OR10H5Q8NGA6 315 aa13.05□□□□□ -0.32
CDK5RAP3-201ENST00000338399 RAB2BQ8WUD1 216 aa13.05□□□□□ -0.32
CDK5RAP3-201ENST00000338399 HTRA1Q92743 480 aa13.05□□□□□ -0.32
CDK5RAP3-201ENST00000338399 RPL3LQ92901 407 aaKnown RBP13.05□□□□□ -0.32
CDK5RAP3-201ENST00000338399 MRPL48Q96GC5 212 aaKnown RBP13.05□□□□□ -0.32
CDK5RAP3-201ENST00000338399 AMELYQ99218 206 aa13.05□□□□□ -0.32
CDK5RAP3-201ENST00000338399 DOK1Q99704 481 aa13.05□□□□□ -0.32
CDK5RAP3-201ENST00000338399 RBM24Q9BX46 236 aaKnown RBP13.05□□□□□ -0.32
CDK5RAP3-201ENST00000338399 ULBP2Q9BZM5 246 aa13.05□□□□□ -0.32
CDK5RAP3-201ENST00000338399 BCO1Q9HAY6 547 aa13.05□□□□□ -0.32
CDK5RAP3-201ENST00000338399 TMEM14AQ9Y6G1 99 aa13.05□□□□□ -0.32
CDK5RAP3-201ENST00000338399 ATMQ13315 3056 aa13.05□□□□□ -0.32
CDK5RAP3-201ENST00000338399 CACNA1AO00555 2505 aa13.04□□□□□ -0.32
CDK5RAP3-201ENST00000338399 MED12LQ86YW9 2145 aa13.04□□□□□ -0.32
CDK5RAP3-201ENST00000338399 ZNF724A8MTY0 619 aa13.04□□□□□ -0.32
CDK5RAP3-201ENST00000338399 E9PI62 339 aa13.04□□□□□ -0.32
CDK5RAP3-201ENST00000338399 ZNF701M0R085 212 aaPredicted RBP13.04□□□□□ -0.32
CDK5RAP3-201ENST00000338399 DHHO43323 396 aa13.04□□□□□ -0.32
CDK5RAP3-201ENST00000338399 MRPL33O75394 65 aaKnown RBP13.04□□□□□ -0.32
CDK5RAP3-201ENST00000338399 GABARAPO95166 117 aa13.04□□□□□ -0.32
CDK5RAP3-201ENST00000338399 HRGP04196 525 aa13.04□□□□□ -0.32
CDK5RAP3-201ENST00000338399 ZNF133P52736 654 aaPredicted RBP13.04□□□□□ -0.32
CDK5RAP3-201ENST00000338399 TPBGQ13641 420 aa13.04□□□□□ -0.32
CDK5RAP3-201ENST00000338399 EIF2B1Q14232 305 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms