RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 IGKV1D-43A0A0B4J1Z2 117 aa10.42□□□□□ -0.74
SPTLC1-202ENST00000337841 A0A1W2PR80 420 aa10.42□□□□□ -0.74
SPTLC1-202ENST00000337841 PRR23D1E9PI22 279 aaPredicted RBP10.42□□□□□ -0.74
SPTLC1-202ENST00000337841 SEC14L2O76054 403 aa10.42□□□□□ -0.74
SPTLC1-202ENST00000337841 UBL3O95164 117 aa10.42□□□□□ -0.74
SPTLC1-202ENST00000337841 GOSR1O95249 250 aa10.42□□□□□ -0.74
SPTLC1-202ENST00000337841 PRR23D2P0DMB1 279 aaPredicted RBP10.42□□□□□ -0.74
SPTLC1-202ENST00000337841 CD79AP11912 226 aa10.42□□□□□ -0.74
SPTLC1-202ENST00000337841 CBR1P16152 277 aa10.42□□□□□ -0.74
SPTLC1-202ENST00000337841 CTLA4P16410 223 aa10.42□□□□□ -0.74
SPTLC1-202ENST00000337841 CRYGSP22914 178 aa10.42□□□□□ -0.74
SPTLC1-202ENST00000337841 CDAP32320 146 aa10.42□□□□□ -0.74
SPTLC1-202ENST00000337841 ARR3P36575 388 aa10.42□□□□□ -0.74
SPTLC1-202ENST00000337841 BLVRAP53004 296 aa10.42□□□□□ -0.74
SPTLC1-202ENST00000337841 SLC25A1P53007 311 aa10.42□□□□□ -0.74
SPTLC1-202ENST00000337841 GLO1Q04760 184 aa10.42□□□□□ -0.74
SPTLC1-202ENST00000337841 CRMP1Q14194 572 aa10.42□□□□□ -0.74
SPTLC1-202ENST00000337841 ETFDHQ16134 617 aa10.42□□□□□ -0.74
SPTLC1-202ENST00000337841 SLC36A2Q495M3 483 aa10.42□□□□□ -0.74
SPTLC1-202ENST00000337841 FAM27BQ5VT28 67 aa10.42□□□□□ -0.74
SPTLC1-202ENST00000337841 SLX4IPQ5VYV7 408 aa10.42□□□□□ -0.74
SPTLC1-202ENST00000337841 FBXW10Q5XX13 1052 aa10.42□□□□□ -0.74
SPTLC1-202ENST00000337841 TMEM53Q6P2H8 277 aa10.42□□□□□ -0.74
SPTLC1-202ENST00000337841 C22orf34Q6ZV56 151 aa10.42□□□□□ -0.74
SPTLC1-202ENST00000337841 SLC16A14Q7RTX9 510 aa10.42□□□□□ -0.74
SPTLC1-202ENST00000337841 SKA3Q8IX90 412 aa10.42□□□□□ -0.74
SPTLC1-202ENST00000337841 OR6V1Q8N148 313 aa10.42□□□□□ -0.74
SPTLC1-202ENST00000337841 GALNT4Q8N4A0 578 aa10.42□□□□□ -0.74
SPTLC1-202ENST00000337841 PACRGLQ8N7B6 248 aa10.42□□□□□ -0.74
SPTLC1-202ENST00000337841 CYB561A3Q8NBI2 242 aa10.42□□□□□ -0.74
SPTLC1-202ENST00000337841 OTULINQ96BN8 352 aa10.42□□□□□ -0.74
SPTLC1-202ENST00000337841 DDOQ99489 341 aa10.42□□□□□ -0.74
SPTLC1-202ENST00000337841 WACQ9BTA9 647 aa10.42□□□□□ -0.74
SPTLC1-202ENST00000337841 C1QTNF6Q9BXI9 259 aa10.42□□□□□ -0.74
SPTLC1-202ENST00000337841 GABARAPL3Q9BY60 117 aa10.42□□□□□ -0.74
SPTLC1-202ENST00000337841 ESRP2Q9H6T0 727 aaKnown RBP10.42□□□□□ -0.74
SPTLC1-202ENST00000337841 RNF121Q9H920 327 aa10.42□□□□□ -0.74
SPTLC1-202ENST00000337841 RNPEPL1Q9HAU8 725 aa10.42□□□□□ -0.74
SPTLC1-202ENST00000337841 H2AFY2Q9P0M6 372 aaPredicted RBP10.42□□□□□ -0.74
SPTLC1-202ENST00000337841 UGT2A1Q9Y4X1 527 aa10.42□□□□□ -0.74
SPTLC1-202ENST00000337841 GCN1Q92616 2671 aaKnown RBP10.42□□□□□ -0.74
SPTLC1-202ENST00000337841 LRRK2Q5S007 2527 aa10.42□□□□□ -0.74
SPTLC1-202ENST00000337841 TENM4Q6N022 2769 aa10.41□□□□□ -0.74
SPTLC1-202ENST00000337841 ZAR1LA6NP61 321 aa10.41□□□□□ -0.74
SPTLC1-202ENST00000337841 C12orf71A8MTZ7 269 aa10.41□□□□□ -0.74
SPTLC1-202ENST00000337841 SURF4O15260 269 aa10.41□□□□□ -0.74
SPTLC1-202ENST00000337841 HLA-DQA2P01906 255 aa10.41□□□□□ -0.74
SPTLC1-202ENST00000337841 MSR1P21757 451 aa10.41□□□□□ -0.74
SPTLC1-202ENST00000337841 POLR2IP36954 125 aaKnown RBP10.41□□□□□ -0.74
SPTLC1-202ENST00000337841 ZNF83P51522 516 aa10.41□□□□□ -0.74
SPTLC1-202ENST00000337841 NR1H2P55055 460 aa10.41□□□□□ -0.74
SPTLC1-202ENST00000337841 PCBD1P61457 104 aa10.41□□□□□ -0.74
SPTLC1-202ENST00000337841 RAB1AP62820 205 aa10.41□□□□□ -0.74
SPTLC1-202ENST00000337841 PIGFQ07326 219 aa10.41□□□□□ -0.74
SPTLC1-202ENST00000337841 RIPK1Q13546 671 aa10.41□□□□□ -0.74
SPTLC1-202ENST00000337841 LRRC36Q1X8D7 754 aa10.41□□□□□ -0.74
SPTLC1-202ENST00000337841 GSG1Q2KHT4 349 aa10.41□□□□□ -0.74
SPTLC1-202ENST00000337841 ZIK1Q3SY52 487 aaPredicted RBP10.41□□□□□ -0.74
SPTLC1-202ENST00000337841 BEX5Q5H9J7 111 aa10.41□□□□□ -0.74
SPTLC1-202ENST00000337841 LPCAT4Q643R3 524 aa10.41□□□□□ -0.74
SPTLC1-202ENST00000337841 FOXL2NBQ6ZUU3 175 aa10.41□□□□□ -0.74
SPTLC1-202ENST00000337841 ZBTB46Q86UZ6 589 aa10.41□□□□□ -0.74
SPTLC1-202ENST00000337841 LRRC18Q8N456 261 aa10.41□□□□□ -0.74
SPTLC1-202ENST00000337841 FAM169BQ8N8A8 192 aa10.41□□□□□ -0.74
SPTLC1-202ENST00000337841 PROKR2Q8NFJ6 384 aa10.41□□□□□ -0.74
SPTLC1-202ENST00000337841 RDH12Q96NR8 316 aa10.41□□□□□ -0.74
SPTLC1-202ENST00000337841 TSSK2Q96PF2 358 aa10.41□□□□□ -0.74
SPTLC1-202ENST00000337841 SH3GL3Q99963 347 aa10.41□□□□□ -0.74
SPTLC1-202ENST00000337841 RACGAP1Q9H0H5 632 aa10.41□□□□□ -0.74
SPTLC1-202ENST00000337841 VCXQ9H320 206 aa10.41□□□□□ -0.74
SPTLC1-202ENST00000337841 NELFAQ9H3P2 528 aa10.41□□□□□ -0.74
SPTLC1-202ENST00000337841 CCNB1IP1Q9NPC3 277 aa10.41□□□□□ -0.74
SPTLC1-202ENST00000337841 POLE4Q9NR33 117 aa10.41□□□□□ -0.74
SPTLC1-202ENST00000337841 FBXL3Q9UKT7 428 aa10.41□□□□□ -0.74
SPTLC1-202ENST00000337841 MOKQ9UQ07 419 aa10.41□□□□□ -0.74
SPTLC1-202ENST00000337841 RELNP78509 3460 aa10.41□□□□□ -0.74
SPTLC1-202ENST00000337841 IGLV1-36A0A0B4J1U3 117 aa10.4□□□□□ -0.74
SPTLC1-202ENST00000337841 A6NNC1 897 aa10.4□□□□□ -0.74
SPTLC1-202ENST00000337841 M0R1B8 84 aa10.4□□□□□ -0.74
SPTLC1-202ENST00000337841 CASQ2O14958 399 aaPredicted RBP10.4□□□□□ -0.74
SPTLC1-202ENST00000337841 TLX2O43763 284 aaPredicted RBP10.4□□□□□ -0.74
SPTLC1-202ENST00000337841 TMCC2O75069 709 aa10.4□□□□□ -0.74
SPTLC1-202ENST00000337841 RAB36O95755 333 aa10.4□□□□□ -0.74
SPTLC1-202ENST00000337841 PTHP01270 115 aa10.4□□□□□ -0.74
SPTLC1-202ENST00000337841 HLA-HP01893 362 aa10.4□□□□□ -0.74
SPTLC1-202ENST00000337841 CST2P09228 141 aa10.4□□□□□ -0.74
SPTLC1-202ENST00000337841 ZNF823P16415 610 aa10.4□□□□□ -0.74
SPTLC1-202ENST00000337841 PTAFRP25105 342 aa10.4□□□□□ -0.74
SPTLC1-202ENST00000337841 SSTR2P30874 369 aa10.4□□□□□ -0.74
SPTLC1-202ENST00000337841 FMO3P31513 532 aa10.4□□□□□ -0.74
SPTLC1-202ENST00000337841 CDC42P60953 191 aa10.4□□□□□ -0.74
SPTLC1-202ENST00000337841 LSM6P62312 80 aaKnown RBP10.4□□□□□ -0.74
SPTLC1-202ENST00000337841 TUBA1BP68363 451 aa10.4□□□□□ -0.74
SPTLC1-202ENST00000337841 TUBA4AP68366 448 aa10.4□□□□□ -0.74
SPTLC1-202ENST00000337841 HSF2Q03933 536 aa10.4□□□□□ -0.74
SPTLC1-202ENST00000337841 PLP2Q04941 152 aa10.4□□□□□ -0.74
SPTLC1-202ENST00000337841 KCNMB1Q16558 191 aa10.4□□□□□ -0.74
SPTLC1-202ENST00000337841 C12orf73Q69YU5 71 aa10.4□□□□□ -0.74
SPTLC1-202ENST00000337841 TMEM108Q6UXF1 575 aa10.4□□□□□ -0.74
SPTLC1-202ENST00000337841 TUBA1AQ71U36 451 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms