RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 RSPO1Q2MKA7 263 aaPredicted RBP4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 ZNF324BQ6AW86 544 aaPredicted RBP4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 FAM173AQ9BQD7 235 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 PIGQQ9BRB3 760 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 TMEM165Q9HC07 324 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 IRAK4Q9NWZ3 460 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 NUFIP1Q9UHK0 495 aaKnown RBP4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 FBXL4Q9UKA2 621 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 FBXL2Q9UKC9 423 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 PADI1Q9ULC6 663 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 TANC2Q9HCD6 1990 aa4.77□□□□□ -1.65
PRPF4B-201ENST00000337659 PI4KAP42356 2102 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 A0A1B0GTI1 187 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 LOC101059948A0A1B0GTJ6 334 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 ZNF879B4DU55 563 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 LIPCP11150 499 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 EPXP11678 715 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 MAPK3P27361 379 aaPredicted RBP4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 RFX2P48378 723 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 ENDOGQ14249 297 aaKnown RBP4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 ZMAT1Q5H9K5 638 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 OR2G6Q5TZ20 316 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 DNM1P34Q6PK57 102 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 ARSKQ6UWY0 536 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 ESPNLQ6ZVH7 1005 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 RAB11FIP2Q7L804 512 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 GPR137CQ8N3F9 429 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 SNIP1Q8TAD8 396 aaKnown RBP4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 C1orf147Q96MC9 270 aaPredicted RBP4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 ULBP3Q9BZM4 244 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 RHOFQ9HBH0 211 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 DEPPQ9NTK1 212 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 IL36GQ9NZH8 169 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 NPTNQ9Y639 398 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 R4GN57 208 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 SMAD9O15198 467 aaKnown RBP4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 RAD1O60671 282 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 APOA1P02647 267 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 IFNA16P05015 189 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 CCL3P10147 92 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 DDOSTP39656 456 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 PAX5Q02548 391 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 DYRK1AQ13627 763 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 PON3Q15166 354 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 SOWAHCQ53LP3 525 aaPredicted RBP4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 ELMOD2Q8IZ81 293 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 OR52E2Q8NGJ4 325 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 CPT1CQ8TCG5 803 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 RASD2Q96D21 266 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 Q96M85 177 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 GPN3Q9UHW5 284 aaPredicted RBP4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 GPR52Q9Y2T5 361 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 ADAM18Q9Y3Q7 739 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 LHFPL6Q9Y693 200 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 VCANP13611 3396 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 ZNF814B7Z6K7 855 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 SULT1C2O00338 296 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 CDC123O75794 336 aaPredicted RBP4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 RENP00797 406 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 TACSTD2P09758 323 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 CLUP10909 449 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 CXCR1P25024 350 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 PSMB9P28065 219 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 TNFSF8P32971 234 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 STPG1Q5TH74 334 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 FAM27BQ5VT28 67 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 C1orf189Q5VU69 101 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 HLA-DQA1Q5Y7H0 255 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 GLB1L2Q8IW92 636 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 OR2G2Q8NGZ5 317 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 ZNF417Q8TAU3 575 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 SLC25A38Q96DW6 304 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 C4orf36Q96KX1 117 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 ZNF587Q96SQ5 575 aaPredicted RBP4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 INTS14Q96SY0 518 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 NMNAT3Q96T66 252 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 UQCC2Q9BRT2 126 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 EDEM2Q9BV94 578 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 EXO5Q9H790 373 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 IFT22Q9H7X7 185 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 ASXL3Q9C0F0 2248 aa4.76□□□□□ -1.65
PRPF4B-201ENST00000337659 PHF3Q92576 2039 aaKnown RBP4.75□□□□□ -1.65
PRPF4B-201ENST00000337659 A0A1W2PRG6 482 aa4.75□□□□□ -1.65
PRPF4B-201ENST00000337659 ATXN7O15265 892 aaPredicted RBP4.75□□□□□ -1.65
PRPF4B-201ENST00000337659 MMP7P09237 267 aaPredicted RBP4.75□□□□□ -1.65
PRPF4B-201ENST00000337659 HOXB1P14653 301 aaPredicted RBP4.75□□□□□ -1.65
PRPF4B-201ENST00000337659 SOX6P35712 828 aa4.75□□□□□ -1.65
PRPF4B-201ENST00000337659 TGFBR1P36897 503 aa4.75□□□□□ -1.65
PRPF4B-201ENST00000337659 GBX2P52951 348 aaPredicted RBP4.75□□□□□ -1.65
PRPF4B-201ENST00000337659 TPD52P55327 224 aaPredicted RBP4.75□□□□□ -1.65
PRPF4B-201ENST00000337659 SLC36A2Q495M3 483 aa4.75□□□□□ -1.65
PRPF4B-201ENST00000337659 Q499Y3 187 aa4.75□□□□□ -1.65
PRPF4B-201ENST00000337659 UBE2NLQ5JXB2 153 aa4.75□□□□□ -1.65
PRPF4B-201ENST00000337659 PHF19Q5T6S3 580 aa4.75□□□□□ -1.65
PRPF4B-201ENST00000337659 SLC22A10Q63ZE4 541 aa4.75□□□□□ -1.65
PRPF4B-201ENST00000337659 SFXN2Q96NB2 322 aa4.75□□□□□ -1.65
PRPF4B-201ENST00000337659 SLC30A2Q9BRI3 323 aa4.75□□□□□ -1.65
PRPF4B-201ENST00000337659 POLE4Q9NR33 117 aa4.75□□□□□ -1.65
PRPF4B-201ENST00000337659 SLC22A13Q9Y226 551 aa4.75□□□□□ -1.65
PRPF4B-201ENST00000337659 ZNF726A6NNF4 738 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms