RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 KCNN2Q9H2S1 579 aa13.46□□□□□ -0.25
SEC13-201ENST00000337354 SRA1Q9HD15 236 aaKnown RBP13.46□□□□□ -0.25
SEC13-201ENST00000337354 RPRD1BQ9NQG5 326 aaKnown RBP13.46□□□□□ -0.25
SEC13-201ENST00000337354 CRIM1Q9NZV1 1036 aa13.46□□□□□ -0.25
SEC13-201ENST00000337354 B9D1Q9UPM9 204 aa13.46□□□□□ -0.25
SEC13-201ENST00000337354 UGT2A1Q9Y4X1 527 aa13.46□□□□□ -0.25
SEC13-201ENST00000337354 SLC25A15Q9Y619 301 aa13.46□□□□□ -0.25
SEC13-201ENST00000337354 INTS1Q8N201 2190 aaKnown RBP13.46□□□□□ -0.25
SEC13-201ENST00000337354 A0A096LPE4 126 aa13.45□□□□□ -0.26
SEC13-201ENST00000337354 A0A1W2PPZ6 126 aa13.45□□□□□ -0.26
SEC13-201ENST00000337354 THBDP07204 575 aa13.45□□□□□ -0.26
SEC13-201ENST00000337354 B4GALT1P15291 398 aa13.45□□□□□ -0.26
SEC13-201ENST00000337354 CTLA4P16410 223 aa13.45□□□□□ -0.26
SEC13-201ENST00000337354 LAP3P28838 519 aa13.45□□□□□ -0.26
SEC13-201ENST00000337354 BLVRAP53004 296 aa13.45□□□□□ -0.26
SEC13-201ENST00000337354 GLO1Q04760 184 aa13.45□□□□□ -0.26
SEC13-201ENST00000337354 SNTB1Q13884 538 aaKnown RBP13.45□□□□□ -0.26
SEC13-201ENST00000337354 CRMP1Q14194 572 aa13.45□□□□□ -0.26
SEC13-201ENST00000337354 SNAPC1Q16533 368 aa13.45□□□□□ -0.26
SEC13-201ENST00000337354 LRRC36Q1X8D7 754 aa13.45□□□□□ -0.26
SEC13-201ENST00000337354 HIKESHIQ53FT3 197 aa13.45□□□□□ -0.26
SEC13-201ENST00000337354 OGFRL1Q5TC84 451 aaPredicted RBP13.45□□□□□ -0.26
SEC13-201ENST00000337354 LPCAT4Q643R3 524 aa13.45□□□□□ -0.26
SEC13-201ENST00000337354 C22orf34Q6ZV56 151 aa13.45□□□□□ -0.26
SEC13-201ENST00000337354 NMNAT2Q9BZQ4 307 aa13.45□□□□□ -0.26
SEC13-201ENST00000337354 GRIP2Q9C0E4 1043 aa13.45□□□□□ -0.26
SEC13-201ENST00000337354 VCXQ9H320 206 aa13.45□□□□□ -0.26
SEC13-201ENST00000337354 NELFAQ9H3P2 528 aa13.45□□□□□ -0.26
SEC13-201ENST00000337354 FN3KQ9H479 309 aa13.45□□□□□ -0.26
SEC13-201ENST00000337354 RIBC2Q9H4K1 309 aa13.45□□□□□ -0.26
SEC13-201ENST00000337354 SEC61A2Q9H9S3 476 aa13.45□□□□□ -0.26
SEC13-201ENST00000337354 TVP23BQ9NYZ1 205 aa13.45□□□□□ -0.26
SEC13-201ENST00000337354 NKX1-2Q9UD57 310 aaPredicted RBP13.45□□□□□ -0.26
SEC13-201ENST00000337354 COA3Q9Y2R0 106 aaPredicted RBP13.45□□□□□ -0.26
SEC13-201ENST00000337354 RRP15Q9Y3B9 282 aaKnown RBP13.45□□□□□ -0.26
SEC13-201ENST00000337354 IGLV1-36A0A0B4J1U3 117 aa13.45□□□□□ -0.26
SEC13-201ENST00000337354 CYSRT1A8MQ03 144 aa13.45□□□□□ -0.26
SEC13-201ENST00000337354 CRYGSP22914 178 aa13.45□□□□□ -0.26
SEC13-201ENST00000337354 EPHA2P29317 976 aa13.45□□□□□ -0.26
SEC13-201ENST00000337354 POLR2IP36954 125 aaKnown RBP13.45□□□□□ -0.26
SEC13-201ENST00000337354 EFNB1P98172 346 aa13.45□□□□□ -0.26
SEC13-201ENST00000337354 ETFDHQ16134 617 aa13.45□□□□□ -0.26
SEC13-201ENST00000337354 SGCAQ16586 387 aa13.45□□□□□ -0.26
SEC13-201ENST00000337354 SLC36A2Q495M3 483 aa13.45□□□□□ -0.26
SEC13-201ENST00000337354 C12orf73Q69YU5 71 aa13.45□□□□□ -0.26
SEC13-201ENST00000337354 CYB561A3Q8NBI2 242 aa13.45□□□□□ -0.26
SEC13-201ENST00000337354 OR52N5Q8NH56 324 aa13.45□□□□□ -0.26
SEC13-201ENST00000337354 TRUB1Q8WWH5 349 aaKnown RBP13.45□□□□□ -0.26
SEC13-201ENST00000337354 MARVELD3Q96A59 401 aa13.45□□□□□ -0.26
SEC13-201ENST00000337354 TSSK2Q96PF2 358 aa13.45□□□□□ -0.26
SEC13-201ENST00000337354 RERGLQ9H628 205 aa13.45□□□□□ -0.26
SEC13-201ENST00000337354 SMPD3Q9NY59 655 aaPredicted RBP13.45□□□□□ -0.26
SEC13-201ENST00000337354 MOKQ9UQ07 419 aa13.45□□□□□ -0.26
SEC13-201ENST00000337354 A0A1W2PPL8 197 aa13.44□□□□□ -0.26
SEC13-201ENST00000337354 PRR23D1E9PI22 279 aaPredicted RBP13.44□□□□□ -0.26
SEC13-201ENST00000337354 DCTN6O00399 190 aa13.44□□□□□ -0.26
SEC13-201ENST00000337354 SEC14L2O76054 403 aa13.44□□□□□ -0.26
SEC13-201ENST00000337354 UBL3O95164 117 aa13.44□□□□□ -0.26
SEC13-201ENST00000337354 PRR23D2P0DMB1 279 aaPredicted RBP13.44□□□□□ -0.26
SEC13-201ENST00000337354 CBR1P16152 277 aa13.44□□□□□ -0.26
SEC13-201ENST00000337354 MSR1P21757 451 aa13.44□□□□□ -0.26
SEC13-201ENST00000337354 PEX2P28328 305 aa13.44□□□□□ -0.26
SEC13-201ENST00000337354 CDAP32320 146 aa13.44□□□□□ -0.26
SEC13-201ENST00000337354 ARR3P36575 388 aa13.44□□□□□ -0.26
SEC13-201ENST00000337354 PTDSS1P48651 473 aaKnown RBP13.44□□□□□ -0.26
SEC13-201ENST00000337354 LSM6P62312 80 aaKnown RBP13.44□□□□□ -0.26
SEC13-201ENST00000337354 HSF2Q03933 536 aa13.44□□□□□ -0.26
SEC13-201ENST00000337354 KCNMB1Q16558 191 aa13.44□□□□□ -0.26
SEC13-201ENST00000337354 C3orf36Q3SXR2 165 aa13.44□□□□□ -0.26
SEC13-201ENST00000337354 SLC16A14Q7RTX9 510 aa13.44□□□□□ -0.26
SEC13-201ENST00000337354 SYT9Q86SS6 491 aa13.44□□□□□ -0.26
SEC13-201ENST00000337354 SKA3Q8IX90 412 aa13.44□□□□□ -0.26
SEC13-201ENST00000337354 GALNT4Q8N4A0 578 aa13.44□□□□□ -0.26
SEC13-201ENST00000337354 PTP4A1Q93096 173 aa13.44□□□□□ -0.26
SEC13-201ENST00000337354 NABP1Q96AH0 204 aa13.44□□□□□ -0.26
SEC13-201ENST00000337354 ZC3HAV1LQ96H79 300 aaKnown RBP13.44□□□□□ -0.26
SEC13-201ENST00000337354 HRASLS5Q96KN8 279 aa13.44□□□□□ -0.26
SEC13-201ENST00000337354 TOR3AQ9H497 397 aa13.44□□□□□ -0.26
SEC13-201ENST00000337354 POLE4Q9NR33 117 aa13.44□□□□□ -0.26
SEC13-201ENST00000337354 B3GNT2Q9NY97 397 aa13.44□□□□□ -0.26
SEC13-201ENST00000337354 E9PQ18 207 aa13.43□□□□□ -0.26
SEC13-201ENST00000337354 SLC16A6O15403 523 aa13.43□□□□□ -0.26
SEC13-201ENST00000337354 HRGP04196 525 aa13.43□□□□□ -0.26
SEC13-201ENST00000337354 CST2P09228 141 aa13.43□□□□□ -0.26
SEC13-201ENST00000337354 CAPZA2P47755 286 aa13.43□□□□□ -0.26
SEC13-201ENST00000337354 NR1H2P55055 460 aa13.43□□□□□ -0.26
SEC13-201ENST00000337354 CDC42P60953 191 aa13.43□□□□□ -0.26
SEC13-201ENST00000337354 PCBD1P61457 104 aa13.43□□□□□ -0.26
SEC13-201ENST00000337354 RAB1AP62820 205 aa13.43□□□□□ -0.26
SEC13-201ENST00000337354 GSG1Q2KHT4 349 aa13.43□□□□□ -0.26
SEC13-201ENST00000337354 ZIK1Q3SY52 487 aaPredicted RBP13.43□□□□□ -0.26
SEC13-201ENST00000337354 BEX5Q5H9J7 111 aa13.43□□□□□ -0.26
SEC13-201ENST00000337354 WFDC8Q8IUA0 241 aa13.43□□□□□ -0.26
SEC13-201ENST00000337354 PROKR2Q8NFJ6 384 aa13.43□□□□□ -0.26
SEC13-201ENST00000337354 OR8J1Q8NGP2 316 aa13.43□□□□□ -0.26
SEC13-201ENST00000337354 SH3GL3Q99963 347 aa13.43□□□□□ -0.26
SEC13-201ENST00000337354 VCX3BQ9H321 246 aa13.43□□□□□ -0.26
SEC13-201ENST00000337354 ESRP2Q9H6T0 727 aaKnown RBP13.43□□□□□ -0.26
SEC13-201ENST00000337354 CRNNQ9UBG3 495 aaPredicted RBP13.43□□□□□ -0.26
SEC13-201ENST00000337354 FBXL3Q9UKT7 428 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms