RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 SIDT1Q9NXL6 827 aaKnown RBP10.82□□□□□ -0.68
LIMK2-202ENST00000333611 DEC1Q9P2X7 70 aa10.82□□□□□ -0.68
LIMK2-202ENST00000333611 FBXO7Q9Y3I1 522 aa10.82□□□□□ -0.68
LIMK2-202ENST00000333611 RNF215Q9Y6U7 377 aa10.82□□□□□ -0.68
LIMK2-202ENST00000333611 TCF20Q9UGU0 1960 aaKnown RBP10.82□□□□□ -0.68
LIMK2-202ENST00000333611 CARNS1A5YM72 827 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 LDB3O75112 727 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 NDUFB6O95139 128 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 CD1CP29017 333 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 LSSP48449 732 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 RAG2P55895 527 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 MPPED2Q15777 294 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 HACD4Q5VWC8 232 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 UQCC3Q6UW78 93 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 NRSN1Q8IZ57 195 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 KDM8Q8N371 416 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 OR52E2Q8NGJ4 325 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 CHRNA9Q9UGM1 479 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 A0A1B0GWJ7 208 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 SMCO3A2RU48 225 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 TRAPPC13A5PLN9 417 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 NAP1L6A6NFF2 107 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 GABARAPH6UMI1 98 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 SLC31A1O15431 190 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 SPINT1O43278 529 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 THY1P04216 161 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 JMJD7P0C870 316 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 RPA2P15927 270 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 TSFMP43897 325 aaKnown RBP10.81□□□□□ -0.68
LIMK2-202ENST00000333611 RPS15P62841 145 aaKnown RBP10.81□□□□□ -0.68
LIMK2-202ENST00000333611 ADAM8P78325 824 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 PRDX1Q06830 199 aaKnown RBP10.81□□□□□ -0.68
LIMK2-202ENST00000333611 LIPNQ5VXI9 398 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 NIPAL3Q6P499 406 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 CD200R1LQ6Q8B3 271 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 GLB1L2Q8IW92 636 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 CRIPAKQ8N1N5 446 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 C10orf53Q8N6V4 93 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 COX18Q8N8Q8 333 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 PTCHD1Q96NR3 888 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 AICDAQ9GZX7 198 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 PELI2Q9HAT8 420 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 MBNL1Q9NR56 388 aaKnown RBP10.81□□□□□ -0.68
LIMK2-202ENST00000333611 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.81□□□□□ -0.68
LIMK2-202ENST00000333611 ZNF443Q9Y2A4 671 aaPredicted RBP10.81□□□□□ -0.68
LIMK2-202ENST00000333611 DENND4AQ7Z401 1863 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 TBC1D3DA0A087WVF3 549 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 TBC1D3IA0A087WXS9 549 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 TBC1D3EA0A087X179 549 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 TBC1D3KA0A087X1G2 549 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 TBC1D3FA6NER0 549 aaPredicted RBP10.81□□□□□ -0.68
LIMK2-202ENST00000333611 TBC1D3LB9A6J9 549 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 ACOT7O00154 380 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 NME2P1O60361 137 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 PAPLNO95428 1278 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 TBC1D3HP0C7X1 549 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 CASRP41180 1078 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 GSK3AP49840 483 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 SNRPNP63162 240 aaKnown RBP10.81□□□□□ -0.68
LIMK2-202ENST00000333611 CDK3Q00526 305 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 PJVKQ0ZLH3 352 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 IKZF1Q13422 519 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 ENPP2Q13822 863 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 OTPQ5XKR4 325 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 TBC1D3GQ6DHY5 549 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 TBC1D3CQ6IPX1 549 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 MBOAT2Q6ZWT7 520 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 ERN2Q76MJ5 926 aaKnown RBP10.81□□□□□ -0.68
LIMK2-202ENST00000333611 RNF44Q7L0R7 432 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 RANBP3LQ86VV4 465 aaPredicted RBP10.81□□□□□ -0.68
LIMK2-202ENST00000333611 SLC35F3Q8IY50 421 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 TBC1D3Q8IZP1 549 aaPredicted RBP10.81□□□□□ -0.68
LIMK2-202ENST00000333611 OR4A4PQ8NGN8 299 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 GOLT1BQ9Y3E0 138 aa10.81□□□□□ -0.68
LIMK2-202ENST00000333611 FRMPD3Q5JV73 1810 aa10.8□□□□□ -0.68
LIMK2-202ENST00000333611 A0A0A6YYD5 115 aa10.8□□□□□ -0.68
LIMK2-202ENST00000333611 IMPA2O14732 288 aa10.8□□□□□ -0.68
LIMK2-202ENST00000333611 OR2A4O95047 310 aa10.8□□□□□ -0.68
LIMK2-202ENST00000333611 MBPP02686 304 aaPredicted RBP10.8□□□□□ -0.68
LIMK2-202ENST00000333611 EPCAMP16422 314 aa10.8□□□□□ -0.68
LIMK2-202ENST00000333611 ZNF28P17035 718 aa10.8□□□□□ -0.68
LIMK2-202ENST00000333611 CEBPBP17676 345 aa10.8□□□□□ -0.68
LIMK2-202ENST00000333611 EXOSC7Q15024 291 aaKnown RBP10.8□□□□□ -0.68
LIMK2-202ENST00000333611 DUSP5Q16690 384 aa10.8□□□□□ -0.68
LIMK2-202ENST00000333611 TRMT12Q53H54 448 aaKnown RBP10.8□□□□□ -0.68
LIMK2-202ENST00000333611 UBE2NLQ5JXB2 153 aa10.8□□□□□ -0.68
LIMK2-202ENST00000333611 MRPL2Q5T653 305 aaKnown RBP10.8□□□□□ -0.68
LIMK2-202ENST00000333611 DMRTA1Q5VZB9 504 aa10.8□□□□□ -0.68
LIMK2-202ENST00000333611 CD300LDQ6UXZ3 194 aa10.8□□□□□ -0.68
LIMK2-202ENST00000333611 BPIFB2Q8N4F0 458 aa10.8□□□□□ -0.68
LIMK2-202ENST00000333611 C15orf54Q8N8G6 183 aa10.8□□□□□ -0.68
LIMK2-202ENST00000333611 OR13C9Q8NGT0 318 aa10.8□□□□□ -0.68
LIMK2-202ENST00000333611 TMEM239Q8WW34 195 aa10.8□□□□□ -0.68
LIMK2-202ENST00000333611 ZBTB8AQ96BR9 441 aa10.8□□□□□ -0.68
LIMK2-202ENST00000333611 MS4A6EQ96DS6 147 aa10.8□□□□□ -0.68
LIMK2-202ENST00000333611 HS6ST2Q96MM7 605 aa10.8□□□□□ -0.68
LIMK2-202ENST00000333611 LRRC3BQ96PB8 259 aa10.8□□□□□ -0.68
LIMK2-202ENST00000333611 OR2A7Q96R45 310 aa10.8□□□□□ -0.68
LIMK2-202ENST00000333611 UBL7Q96S82 380 aaPredicted RBP10.8□□□□□ -0.68
LIMK2-202ENST00000333611 TEAD3Q99594 435 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 186.8 ms