RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 CPN1P15169 458 aa16.7■□□□□ 0.26
EXOSC3-201ENST00000327304 PYCR1P32322 319 aa16.7■□□□□ 0.26
EXOSC3-201ENST00000327304 NAA10P41227 235 aaPredicted RBP16.7■□□□□ 0.26
EXOSC3-201ENST00000327304 CENPAP49450 140 aa16.7■□□□□ 0.26
EXOSC3-201ENST00000327304 H3F3AP84243 136 aa16.7■□□□□ 0.26
EXOSC3-201ENST00000327304 FABP5Q01469 135 aa16.7■□□□□ 0.26
EXOSC3-201ENST00000327304 TRAM1Q15629 374 aa16.7■□□□□ 0.26
EXOSC3-201ENST00000327304 SLC16A9Q7RTY1 509 aa16.7■□□□□ 0.26
EXOSC3-201ENST00000327304 FGD2Q7Z6J4 655 aa16.7■□□□□ 0.26
EXOSC3-201ENST00000327304 ADPRHL1Q8NDY3 354 aa16.7■□□□□ 0.26
EXOSC3-201ENST00000327304 TM9SF2Q99805 663 aa16.7■□□□□ 0.26
EXOSC3-201ENST00000327304 VSX1Q9NZR4 365 aaPredicted RBP16.7■□□□□ 0.26
EXOSC3-201ENST00000327304 SVILO95425 2214 aa16.69■□□□□ 0.26
EXOSC3-201ENST00000327304 PRSS37A4D1T9 235 aa16.69■□□□□ 0.26
EXOSC3-201ENST00000327304 AQP7P3A6NL99 342 aa16.69■□□□□ 0.26
EXOSC3-201ENST00000327304 NPIPA2E9PIF3 369 aa16.69■□□□□ 0.26
EXOSC3-201ENST00000327304 NPIPA3F8WFD2 350 aa16.69■□□□□ 0.26
EXOSC3-201ENST00000327304 J3QLW9 94 aa16.69■□□□□ 0.26
EXOSC3-201ENST00000327304 SMAD9O15198 467 aaKnown RBP16.69■□□□□ 0.26
EXOSC3-201ENST00000327304 SELENOFO60613 162 aa16.69■□□□□ 0.26
EXOSC3-201ENST00000327304 ZNF19P17023 458 aa16.69■□□□□ 0.26
EXOSC3-201ENST00000327304 ENPP1P22413 925 aa16.69■□□□□ 0.26
EXOSC3-201ENST00000327304 RPS19P39019 145 aaKnown RBP16.69■□□□□ 0.26
EXOSC3-201ENST00000327304 AGFG1P52594 562 aaKnown RBP16.69■□□□□ 0.26
EXOSC3-201ENST00000327304 OR12D2P58182 307 aa16.69■□□□□ 0.26
EXOSC3-201ENST00000327304 PDSS1Q5T2R2 415 aa16.69■□□□□ 0.26
EXOSC3-201ENST00000327304 PLXDC2Q6UX71 529 aa16.69■□□□□ 0.26
EXOSC3-201ENST00000327304 SSX6Q7RTT6 188 aa16.69■□□□□ 0.26
EXOSC3-201ENST00000327304 OR6V1Q8N148 313 aa16.69■□□□□ 0.26
EXOSC3-201ENST00000327304 SNRNP40Q96DI7 357 aaKnown RBP16.69■□□□□ 0.26
EXOSC3-201ENST00000327304 TSSK2Q96PF2 358 aa16.69■□□□□ 0.26
EXOSC3-201ENST00000327304 MNTQ99583 582 aa16.69■□□□□ 0.26
EXOSC3-201ENST00000327304 SRA1Q9HD15 236 aaKnown RBP16.69■□□□□ 0.26
EXOSC3-201ENST00000327304 B3GAT1Q9P2W7 334 aa16.69■□□□□ 0.26
EXOSC3-201ENST00000327304 A0A1W2PNV4 684 aa16.68■□□□□ 0.26
EXOSC3-201ENST00000327304 A6NIZ1 184 aa16.68■□□□□ 0.26
EXOSC3-201ENST00000327304 DNPH1O43598 174 aa16.68■□□□□ 0.26
EXOSC3-201ENST00000327304 EIF1BO60739 113 aaKnown RBP16.68■□□□□ 0.26
EXOSC3-201ENST00000327304 PLGP00747 810 aaPredicted RBP16.68■□□□□ 0.26
EXOSC3-201ENST00000327304 HLA-DOBP13765 273 aa16.68■□□□□ 0.26
EXOSC3-201ENST00000327304 DAP3P51398 398 aaKnown RBP16.68■□□□□ 0.26
EXOSC3-201ENST00000327304 BLVRAP53004 296 aa16.68■□□□□ 0.26
EXOSC3-201ENST00000327304 RAP1BP61224 184 aa16.68■□□□□ 0.26
EXOSC3-201ENST00000327304 RAP1AP62834 184 aa16.68■□□□□ 0.26
EXOSC3-201ENST00000327304 ZNF239Q16600 458 aaKnown RBP16.68■□□□□ 0.26
EXOSC3-201ENST00000327304 FAM205BPQ63HN1 556 aa16.68■□□□□ 0.26
EXOSC3-201ENST00000327304 C22orf42Q6IC83 251 aa16.68■□□□□ 0.26
EXOSC3-201ENST00000327304 PXKQ7Z7A4 578 aa16.68■□□□□ 0.26
EXOSC3-201ENST00000327304 TIGD4Q8IY51 512 aa16.68■□□□□ 0.26
EXOSC3-201ENST00000327304 SMAP2Q8WU79 429 aaPredicted RBP16.68■□□□□ 0.26
EXOSC3-201ENST00000327304 ROBO4Q8WZ75 1007 aa16.68■□□□□ 0.26
EXOSC3-201ENST00000327304 PRDM14Q9GZV8 571 aa16.68■□□□□ 0.26
EXOSC3-201ENST00000327304 SYT4Q9H2B2 425 aa16.68■□□□□ 0.26
EXOSC3-201ENST00000327304 MARCH7Q9H992 704 aa16.68■□□□□ 0.26
EXOSC3-201ENST00000327304 KLHL13Q9P2N7 655 aa16.68■□□□□ 0.26
EXOSC3-201ENST00000327304 A0A075B6Q4 140 aa16.68■□□□□ 0.26
EXOSC3-201ENST00000327304 DCTN6O00399 190 aa16.68■□□□□ 0.26
EXOSC3-201ENST00000327304 RORCP51449 518 aa16.68■□□□□ 0.26
EXOSC3-201ENST00000327304 TDGF1P3P51864 188 aa16.68■□□□□ 0.26
EXOSC3-201ENST00000327304 HCCSP53701 268 aa16.68■□□□□ 0.26
EXOSC3-201ENST00000327304 PM20D2Q8IYS1 436 aa16.68■□□□□ 0.26
EXOSC3-201ENST00000327304 SNX33Q8WV41 574 aa16.68■□□□□ 0.26
EXOSC3-201ENST00000327304 SARAFQ96BY9 339 aa16.68■□□□□ 0.26
EXOSC3-201ENST00000327304 NAA11Q9BSU3 229 aaPredicted RBP16.68■□□□□ 0.26
EXOSC3-201ENST00000327304 TMED9Q9BVK6 235 aa16.68■□□□□ 0.26
EXOSC3-201ENST00000327304 TIGARQ9NQ88 270 aa16.68■□□□□ 0.26
EXOSC3-201ENST00000327304 ASF1BQ9NVP2 202 aa16.68■□□□□ 0.26
EXOSC3-201ENST00000327304 SIRT4Q9Y6E7 314 aaPredicted RBP16.68■□□□□ 0.26
EXOSC3-201ENST00000327304 EPG5Q9HCE0 2579 aa16.67■□□□□ 0.26
EXOSC3-201ENST00000327304 H7C1C5 153 aa16.67■□□□□ 0.26
EXOSC3-201ENST00000327304 LCN6P62502 163 aa16.67■□□□□ 0.26
EXOSC3-201ENST00000327304 RFLNBQ8N5W9 214 aa16.67■□□□□ 0.26
EXOSC3-201ENST00000327304 ZNF511Q8NB15 262 aa16.67■□□□□ 0.26
EXOSC3-201ENST00000327304 OR5M9Q8NGP3 310 aa16.67■□□□□ 0.26
EXOSC3-201ENST00000327304 CPNE4Q96A23 557 aaPredicted RBP16.67■□□□□ 0.26
EXOSC3-201ENST00000327304 SLX1AQ9BQ83 275 aa16.67■□□□□ 0.26
EXOSC3-201ENST00000327304 NUAK2Q9H093 628 aa16.67■□□□□ 0.26
EXOSC3-201ENST00000327304 COPS3Q9UNS2 423 aa16.67■□□□□ 0.26
EXOSC3-201ENST00000327304 B9D1Q9UPM9 204 aa16.67■□□□□ 0.26
EXOSC3-201ENST00000327304 PEX16Q9Y5Y5 336 aa16.67■□□□□ 0.26
EXOSC3-201ENST00000327304 FAM171A2A8MVW0 826 aa16.66■□□□□ 0.26
EXOSC3-201ENST00000327304 GABRPO00591 440 aa16.66■□□□□ 0.26
EXOSC3-201ENST00000327304 OGG1O15527 345 aa16.66■□□□□ 0.26
EXOSC3-201ENST00000327304 LRRTM2O43300 516 aa16.66■□□□□ 0.26
EXOSC3-201ENST00000327304 CDRT1O95170 752 aa16.66■□□□□ 0.26
EXOSC3-201ENST00000327304 CD1AP06126 327 aa16.66■□□□□ 0.26
EXOSC3-201ENST00000327304 GBX2P52951 348 aaPredicted RBP16.66■□□□□ 0.26
EXOSC3-201ENST00000327304 CCDC58Q4VC31 144 aa16.66■□□□□ 0.26
EXOSC3-201ENST00000327304 KRTCAP3Q53RY4 240 aa16.66■□□□□ 0.26
EXOSC3-201ENST00000327304 DMKNQ6E0U4 476 aaPredicted RBP16.66■□□□□ 0.26
EXOSC3-201ENST00000327304 TMEM225Q6GV28 225 aa16.66■□□□□ 0.26
EXOSC3-201ENST00000327304 KCTD20Q7Z5Y7 419 aa16.66■□□□□ 0.26
EXOSC3-201ENST00000327304 GPAT4Q86UL3 456 aa16.66■□□□□ 0.26
EXOSC3-201ENST00000327304 HAVCR2Q8TDQ0 301 aa16.66■□□□□ 0.26
EXOSC3-201ENST00000327304 SLC25A46Q96AG3 418 aa16.66■□□□□ 0.26
EXOSC3-201ENST00000327304 C6orf62Q9GZU0 229 aaPredicted RBP16.66■□□□□ 0.26
EXOSC3-201ENST00000327304 KCNN2Q9H2S1 579 aa16.66■□□□□ 0.26
EXOSC3-201ENST00000327304 GALNT8Q9NY28 637 aa16.66■□□□□ 0.26
EXOSC3-201ENST00000327304 CRNNQ9UBG3 495 aaPredicted RBP16.66■□□□□ 0.26
EXOSC3-201ENST00000327304 RASD1Q9Y272 281 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms