RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 CMC2Q9NRP2 79 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 MED17Q9NVC6 651 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 VSX1Q9NZR4 365 aaPredicted RBP6.88□□□□□ -1.31
CDHR3-201ENST00000317716 KLHL42Q9P2K6 505 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 OR5V1Q9UGF6 321 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 C14orf166Q9Y224 244 aaKnown RBP6.88□□□□□ -1.31
CDHR3-201ENST00000317716 CACNA1GO43497 2377 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 TP53BP1Q12888 1972 aaPredicted RBP6.88□□□□□ -1.31
CDHR3-201ENST00000317716 hCG_1809904A0A1W2PP81 198 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 A0A1W2PR64 198 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 A0A1W2PRV1 198 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 OR5K3A6NET4 321 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 RHPN2P1A8MT19 583 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 LINC00587B1AMM8 73 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 STK17BO94768 372 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 H2BFMP0C1H6 154 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 SLC2A1P11166 492 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 IL12BP29460 328 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 RIDAP52758 137 aaKnown RBP6.88□□□□□ -1.31
CDHR3-201ENST00000317716 TLE1Q04724 770 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 PLEKHN1Q494U1 663 aaPredicted RBP6.88□□□□□ -1.31
CDHR3-201ENST00000317716 ACTBL2Q562R1 376 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 MFSD12Q6NUT3 480 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 PARM1Q6UWI2 310 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 RBMS3Q6XE24 437 aaKnown RBP6.88□□□□□ -1.31
CDHR3-201ENST00000317716 STAC2Q6ZMT1 411 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 PXKQ7Z7A4 578 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 SAMD14Q8IZD0 417 aaPredicted RBP6.88□□□□□ -1.31
CDHR3-201ENST00000317716 FAM24BQ8N5W8 94 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 OR4D6Q8NGJ1 314 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 MAFAQ8NHW3 353 aaPredicted RBP6.88□□□□□ -1.31
CDHR3-201ENST00000317716 FAM213BQ8TBF2 198 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 ARL5BQ96KC2 179 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 DGAT2Q96PD7 388 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 SFXN1Q9H9B4 322 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 SMCO4Q9NRQ5 59 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 SLCO1C1Q9NYB5 712 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 SF3B6Q9Y3B4 125 aaKnown RBP6.88□□□□□ -1.31
CDHR3-201ENST00000317716 MUC6Q6W4X9 2439 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 CENPVL1A0A0U1RR11 272 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 CLDN4O14493 209 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 CRTAPO75718 401 aaPredicted RBP6.88□□□□□ -1.31
CDHR3-201ENST00000317716 NAGAP17050 411 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 PRPH2P23942 346 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 PSMA3P25788 255 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 GPR18Q14330 331 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 GPR157Q5UAW9 335 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 MEX3BQ6ZN04 569 aaKnown RBP6.88□□□□□ -1.31
CDHR3-201ENST00000317716 ZNF793Q6ZN11 406 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 AVL9Q8NBF6 648 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 MORN4Q8NDC4 146 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 OR5M9Q8NGP3 310 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 OR10AC1Q8NH08 325 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 POLE3Q9NRF9 147 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.88□□□□□ -1.31
CDHR3-201ENST00000317716 IL20Q9NYY1 176 aa6.88□□□□□ -1.31
CDHR3-201ENST00000317716 VPS13AQ96RL7 3174 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 ABCA7Q8IZY2 2146 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 NRG2O14511 850 aaPredicted RBP6.87□□□□□ -1.31
CDHR3-201ENST00000317716 ZNF354AO60765 605 aaPredicted RBP6.87□□□□□ -1.31
CDHR3-201ENST00000317716 RBMXL2O75526 392 aaKnown RBP6.87□□□□□ -1.31
CDHR3-201ENST00000317716 NDUFB6O95139 128 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 IFNA17P01571 189 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 APODP05090 189 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 IL9P15248 144 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 SPI1P17947 270 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 HSD17B2P37059 387 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 GPR143P51810 404 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 MRPS10P82664 201 aaKnown RBP6.87□□□□□ -1.31
CDHR3-201ENST00000317716 ELAVL1Q15717 326 aaKnown RBP6.87□□□□□ -1.31
CDHR3-201ENST00000317716 CHRFAM7AQ494W8 412 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 SLC36A2Q495M3 483 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 FAM78AQ5JUQ0 283 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 SHEQ5VZ18 495 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 ZNF425Q6IV72 752 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 FBXO42Q6P3S6 717 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 HIST2H3AQ71DI3 136 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 LRP11Q86VZ4 500 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 BATF2Q8N1L9 274 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 DIO2Q92813 273 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 AHCYL2Q96HN2 611 aaKnown RBP6.87□□□□□ -1.31
CDHR3-201ENST00000317716 UBE2ZQ9H832 354 aaPredicted RBP6.87□□□□□ -1.31
CDHR3-201ENST00000317716 SIRT3Q9NTG7 399 aaPredicted RBP6.87□□□□□ -1.31
CDHR3-201ENST00000317716 HRASLS2Q9NWW9 162 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 CD207Q9UJ71 328 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 CYP8B1Q9UNU6 501 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 KCNMB2Q9Y691 235 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 ARRDC5A6NEK1 342 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 A6NLC8 198 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 CLEC3AO75596 197 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 RECKO95980 971 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 MGMTP16455 207 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 PTGFRP43088 359 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 NPBWR1P48145 328 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 ASCL1P50553 236 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 AFF3P51826 1226 aaKnown RBP6.87□□□□□ -1.31
CDHR3-201ENST00000317716 SRSF5Q13243 272 aaKnown RBP6.87□□□□□ -1.31
CDHR3-201ENST00000317716 ALKBH1Q13686 389 aaKnown RBP6.87□□□□□ -1.31
CDHR3-201ENST00000317716 C2orf68Q2NKX9 166 aa6.87□□□□□ -1.31
CDHR3-201ENST00000317716 C2orf76Q3KRA6 126 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms