RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 SYNDIG1LA6NDD5 238 aa11.81□□□□□ -0.52
CPNE1-201ENST00000317677 WISP1O95388 367 aa11.81□□□□□ -0.52
CPNE1-201ENST00000317677 ALDOBP05062 364 aa11.81□□□□□ -0.52
CPNE1-201ENST00000317677 HEXBP07686 556 aa11.81□□□□□ -0.52
CPNE1-201ENST00000317677 ETV5P41161 510 aa11.81□□□□□ -0.52
CPNE1-201ENST00000317677 RNF4P78317 190 aa11.81□□□□□ -0.52
CPNE1-201ENST00000317677 TEX30Q5JUR7 227 aa11.81□□□□□ -0.52
CPNE1-201ENST00000317677 SLC22A10Q63ZE4 541 aa11.81□□□□□ -0.52
CPNE1-201ENST00000317677 DHRS7BQ6IAN0 325 aaPredicted RBP11.81□□□□□ -0.52
CPNE1-201ENST00000317677 MRPL14Q6P1L8 145 aaKnown RBP11.81□□□□□ -0.52
CPNE1-201ENST00000317677 BEND4Q6ZU67 534 aa11.81□□□□□ -0.52
CPNE1-201ENST00000317677 OR2T33Q8NG76 320 aa11.81□□□□□ -0.52
CPNE1-201ENST00000317677 NARS2Q96I59 477 aaKnown RBP11.81□□□□□ -0.52
CPNE1-201ENST00000317677 KRCC1Q9NPI7 259 aaPredicted RBP11.81□□□□□ -0.52
CPNE1-201ENST00000317677 ASB6Q9NWX5 421 aa11.81□□□□□ -0.52
CPNE1-201ENST00000317677 COPS7AQ9UBW8 275 aa11.81□□□□□ -0.52
CPNE1-201ENST00000317677 CPAMD8Q8IZJ3 1885 aa11.8□□□□□ -0.52
CPNE1-201ENST00000317677 TMEM200CA6NKL6 621 aa11.8□□□□□ -0.52
CPNE1-201ENST00000317677 OR6C76A6NM76 312 aa11.8□□□□□ -0.52
CPNE1-201ENST00000317677 SCDO00767 359 aa11.8□□□□□ -0.52
CPNE1-201ENST00000317677 TM4SF5O14894 197 aa11.8□□□□□ -0.52
CPNE1-201ENST00000317677 PRODHO43272 600 aa11.8□□□□□ -0.52
CPNE1-201ENST00000317677 TFP02787 698 aa11.8□□□□□ -0.52
CPNE1-201ENST00000317677 HLA-DPB1P04440 258 aa11.8□□□□□ -0.52
CPNE1-201ENST00000317677 CPN1P15169 458 aa11.8□□□□□ -0.52
CPNE1-201ENST00000317677 NPR2P20594 1047 aa11.8□□□□□ -0.52
CPNE1-201ENST00000317677 GIFP27352 417 aa11.8□□□□□ -0.52
CPNE1-201ENST00000317677 ERVK-25P63136 954 aa11.8□□□□□ -0.52
CPNE1-201ENST00000317677 MC2RQ01718 297 aa11.8□□□□□ -0.52
CPNE1-201ENST00000317677 ZNF117Q03924 483 aa11.8□□□□□ -0.52
CPNE1-201ENST00000317677 PLCXD2Q0VAA5 305 aa11.8□□□□□ -0.52
CPNE1-201ENST00000317677 DYRK1AQ13627 763 aa11.8□□□□□ -0.52
CPNE1-201ENST00000317677 GK2Q14410 553 aaPredicted RBP11.8□□□□□ -0.52
CPNE1-201ENST00000317677 VASNQ6EMK4 673 aa11.8□□□□□ -0.52
CPNE1-201ENST00000317677 FAM199XQ6PEV8 388 aaPredicted RBP11.8□□□□□ -0.52
CPNE1-201ENST00000317677 UQCC3Q6UW78 93 aa11.8□□□□□ -0.52
CPNE1-201ENST00000317677 SLC29A4Q7RTT9 530 aa11.8□□□□□ -0.52
CPNE1-201ENST00000317677 OR51A7Q8NH64 312 aa11.8□□□□□ -0.52
CPNE1-201ENST00000317677 OIT3Q8WWZ8 545 aa11.8□□□□□ -0.52
CPNE1-201ENST00000317677 TNFRSF13CQ96RJ3 184 aa11.8□□□□□ -0.52
CPNE1-201ENST00000317677 TCEAL7Q9BRU2 100 aa11.8□□□□□ -0.52
CPNE1-201ENST00000317677 SLC26A1Q9H2B4 701 aa11.8□□□□□ -0.52
CPNE1-201ENST00000317677 EXOSC3Q9NQT5 275 aaKnown RBP11.8□□□□□ -0.52
CPNE1-201ENST00000317677 PPP1R14DQ9NXH3 145 aa11.8□□□□□ -0.52
CPNE1-201ENST00000317677 MED11Q9P086 117 aa11.8□□□□□ -0.52
CPNE1-201ENST00000317677 YARS2Q9Y2Z4 477 aaKnown RBP11.8□□□□□ -0.52
CPNE1-201ENST00000317677 FAM183AA6NL82 134 aa11.79□□□□□ -0.52
CPNE1-201ENST00000317677 ZNF593O00488 134 aaPredicted RBP11.79□□□□□ -0.52
CPNE1-201ENST00000317677 SOCS6O14544 535 aa11.79□□□□□ -0.52
CPNE1-201ENST00000317677 CDX4O14627 284 aaPredicted RBP11.79□□□□□ -0.52
CPNE1-201ENST00000317677 ZNF264O43296 627 aa11.79□□□□□ -0.52
CPNE1-201ENST00000317677 PEX14O75381 377 aa11.79□□□□□ -0.52
CPNE1-201ENST00000317677 ATG12O94817 140 aa11.79□□□□□ -0.52
CPNE1-201ENST00000317677 TOXO94900 526 aa11.79□□□□□ -0.52
CPNE1-201ENST00000317677 PRF1P14222 555 aa11.79□□□□□ -0.52
CPNE1-201ENST00000317677 ACP1P24666 158 aa11.79□□□□□ -0.52
CPNE1-201ENST00000317677 MAPK3P27361 379 aaPredicted RBP11.79□□□□□ -0.52
CPNE1-201ENST00000317677 EMP2P54851 167 aa11.79□□□□□ -0.52
CPNE1-201ENST00000317677 RELQ04864 619 aaPredicted RBP11.79□□□□□ -0.52
CPNE1-201ENST00000317677 TRA2AQ13595 282 aaKnown RBP eCLIP11.79□□□□□ -0.52
CPNE1-201ENST00000317677 PAN3Q58A45 887 aaKnown RBP11.79□□□□□ -0.52
CPNE1-201ENST00000317677 HLA-DQA1Q5Y7H0 255 aa11.79□□□□□ -0.52
CPNE1-201ENST00000317677 TMEM205Q6UW68 189 aa11.79□□□□□ -0.52
CPNE1-201ENST00000317677 ALKAL2Q6UX46 152 aa11.79□□□□□ -0.52
CPNE1-201ENST00000317677 ATG4DQ86TL0 474 aaPredicted RBP11.79□□□□□ -0.52
CPNE1-201ENST00000317677 MARCH3Q86UD3 253 aa11.79□□□□□ -0.52
CPNE1-201ENST00000317677 LNX2Q8N448 690 aa11.79□□□□□ -0.52
CPNE1-201ENST00000317677 C8orf44Q96CB5 159 aa11.79□□□□□ -0.52
CPNE1-201ENST00000317677 DMRTA2Q96SC8 542 aa11.79□□□□□ -0.52
CPNE1-201ENST00000317677 GAL3ST1Q99999 423 aa11.79□□□□□ -0.52
CPNE1-201ENST00000317677 ARHGAP9Q9BRR9 750 aa11.79□□□□□ -0.52
CPNE1-201ENST00000317677 HCAR1Q9BXC0 346 aa11.79□□□□□ -0.52
CPNE1-201ENST00000317677 SEBOXQ9HB31 216 aaPredicted RBP11.79□□□□□ -0.52
CPNE1-201ENST00000317677 OR2M5A3KFT3 312 aa11.79□□□□□ -0.52
CPNE1-201ENST00000317677 SUSD5O60279 629 aa11.79□□□□□ -0.52
CPNE1-201ENST00000317677 FADS1O60427 444 aa11.79□□□□□ -0.52
CPNE1-201ENST00000317677 KDM4BO94953 1096 aa11.79□□□□□ -0.52
CPNE1-201ENST00000317677 HPXP02790 462 aa11.79□□□□□ -0.52
CPNE1-201ENST00000317677 ZNF883P0CG24 379 aa11.79□□□□□ -0.52
CPNE1-201ENST00000317677 SAGP10523 405 aaPredicted RBP11.79□□□□□ -0.52
CPNE1-201ENST00000317677 PVALBP20472 110 aaPredicted RBP11.79□□□□□ -0.52
CPNE1-201ENST00000317677 IL12BP29460 328 aa11.79□□□□□ -0.52
CPNE1-201ENST00000317677 GRK6P43250 576 aa11.79□□□□□ -0.52
CPNE1-201ENST00000317677 SEC61A1P61619 476 aaKnown RBP11.79□□□□□ -0.52
CPNE1-201ENST00000317677 ACSM1Q08AH1 577 aa11.79□□□□□ -0.52
CPNE1-201ENST00000317677 IL11RAQ14626 422 aa11.79□□□□□ -0.52
CPNE1-201ENST00000317677 PAPD4Q6PIY7 484 aaKnown RBP11.79□□□□□ -0.52
CPNE1-201ENST00000317677 SMARCD3Q6STE5 483 aa11.79□□□□□ -0.52
CPNE1-201ENST00000317677 LYPD4Q6UWN0 246 aa11.79□□□□□ -0.52
CPNE1-201ENST00000317677 TMUB2Q71RG4 321 aa11.79□□□□□ -0.52
CPNE1-201ENST00000317677 STX12Q86Y82 276 aa11.79□□□□□ -0.52
CPNE1-201ENST00000317677 SKA3Q8IX90 412 aa11.79□□□□□ -0.52
CPNE1-201ENST00000317677 ZNF440Q8IYI8 595 aa11.79□□□□□ -0.52
CPNE1-201ENST00000317677 ZNF527Q8NB42 609 aa11.79□□□□□ -0.52
CPNE1-201ENST00000317677 ZNF485Q8NCK3 441 aa11.79□□□□□ -0.52
CPNE1-201ENST00000317677 AGBL5Q8NDL9 886 aa11.79□□□□□ -0.52
CPNE1-201ENST00000317677 C17orf47Q8NEP4 570 aa11.79□□□□□ -0.52
CPNE1-201ENST00000317677 PXT1Q8NFP0 134 aa11.79□□□□□ -0.52
CPNE1-201ENST00000317677 RNFT2Q96EX2 444 aa11.79□□□□□ -0.52
CPNE1-201ENST00000317677 MED20Q9H944 212 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms