RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 MRPL39Q9NYK5 338 aaKnown RBP12.77□□□□□ -0.37
VRK3-201ENST00000316763 PTRH2Q9Y3E5 179 aaKnown RBP12.77□□□□□ -0.37
VRK3-201ENST00000316763 CDC14CA4D256 554 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 TRABD2BA6NFA1 517 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 CDRT15L2A8MXV6 281 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 H7C1C5 153 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 SCO2O43819 266 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 GMFGO60234 142 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 ECDO95905 644 aaPredicted RBP12.76□□□□□ -0.37
VRK3-201ENST00000316763 GIFP27352 417 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 DPP4P27487 766 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 CENPAP49450 140 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 BLVRAP53004 296 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 SLC26A5P58743 744 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 AP3S2P59780 193 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 LCN6P62502 163 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 RTP5Q14D33 572 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 POMZP3Q6PJE2 187 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 LRRN1Q6UXK5 716 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 LINGO2Q7L985 606 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 CDH24Q86UP0 819 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 OR8K3Q8NH51 312 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 NUBPLQ8TB37 319 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 C15orf40Q8WUR7 153 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 THEM6Q8WUY1 208 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 RGP1Q92546 391 aaPredicted RBP12.76□□□□□ -0.37
VRK3-201ENST00000316763 RNF166Q96A37 237 aaPredicted RBP12.76□□□□□ -0.37
VRK3-201ENST00000316763 S100A16Q96FQ6 103 aaKnown RBP12.76□□□□□ -0.37
VRK3-201ENST00000316763 SCMH1Q96GD3 660 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 MAP6Q96JE9 813 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 HYLS1Q96M11 299 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 ASCL3Q9NQ33 180 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 KLHDC2Q9Y2U9 406 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 TRBV5-5A0A0J9YX44 114 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 A0A1W2PQ72 361 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 TMEM212A6NML5 194 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 DCTN6O00399 190 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 ABHD16AO95870 558 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 RAF1P04049 648 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 H2AFB2P0C5Z0 115 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 ALOX5APP20292 161 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 ABCD3P28288 659 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 GDNFP39905 211 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 P2RX1P51575 399 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 MRPS10P82664 201 aaKnown RBP12.76□□□□□ -0.37
VRK3-201ENST00000316763 RASGEF1BQ0VAM2 473 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 PCOLCEQ15113 449 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 SGCBQ16585 318 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 FAM69AQ5T7M9 428 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 IGF2-ASQ6U949 168 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 STAC2Q6ZMT1 411 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 ESPNLQ6ZVH7 1005 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 BTN2A1Q7KYR7 527 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 FCRLAQ7L513 359 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 ZNF676Q8N7Q3 588 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 NSMAFQ92636 917 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 ZNF524Q96C55 264 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 GFI1Q99684 422 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 RTN4RQ9BZR6 473 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 ZNF700Q9H0M5 742 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 SYT4Q9H2B2 425 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 LIN7BQ9HAP6 207 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 PLEKHA1Q9HB21 404 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 FRRS1LQ9P0K9 344 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 ING4Q9UNL4 249 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 ETV7Q9Y603 341 aa12.76□□□□□ -0.37
VRK3-201ENST00000316763 TMED7-TICAM2A0A0A6YYA0 188 aa12.75□□□□□ -0.37
VRK3-201ENST00000316763 ARPC4-TTLL3A0A0A6YYG9 625 aa12.75□□□□□ -0.37
VRK3-201ENST00000316763 NAP1L6A6NFF2 107 aa12.75□□□□□ -0.37
VRK3-201ENST00000316763 TMEM200CA6NKL6 621 aa12.75□□□□□ -0.37
VRK3-201ENST00000316763 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.75□□□□□ -0.37
VRK3-201ENST00000316763 C11orf98E9PRG8 122 aa12.75□□□□□ -0.37
VRK3-201ENST00000316763 GABARAPH6UMI1 98 aa12.75□□□□□ -0.37
VRK3-201ENST00000316763 SUSD5O60279 629 aa12.75□□□□□ -0.37
VRK3-201ENST00000316763 DXOO77932 396 aaKnown RBP12.75□□□□□ -0.37
VRK3-201ENST00000316763 OR6A2O95222 327 aa12.75□□□□□ -0.37
VRK3-201ENST00000316763 EVI2BP34910 448 aa12.75□□□□□ -0.37
VRK3-201ENST00000316763 RPL27P61353 136 aaKnown RBP12.75□□□□□ -0.37
VRK3-201ENST00000316763 KLF9Q13886 244 aaPredicted RBP12.75□□□□□ -0.37
VRK3-201ENST00000316763 TOMM34Q15785 309 aaPredicted RBP12.75□□□□□ -0.37
VRK3-201ENST00000316763 CD276Q5ZPR3 534 aa12.75□□□□□ -0.37
VRK3-201ENST00000316763 C5orf46Q6UWT4 87 aa12.75□□□□□ -0.37
VRK3-201ENST00000316763 PRSS45Q7RTY3 260 aa12.75□□□□□ -0.37
VRK3-201ENST00000316763 DPY19L4Q7Z388 723 aa12.75□□□□□ -0.37
VRK3-201ENST00000316763 PM20D2Q8IYS1 436 aa12.75□□□□□ -0.37
VRK3-201ENST00000316763 OR2G2Q8NGZ5 317 aa12.75□□□□□ -0.37
VRK3-201ENST00000316763 ZNF417Q8TAU3 575 aa12.75□□□□□ -0.37
VRK3-201ENST00000316763 ASB17Q8WXJ9 295 aa12.75□□□□□ -0.37
VRK3-201ENST00000316763 PHF21AQ96BD5 680 aa12.75□□□□□ -0.37
VRK3-201ENST00000316763 SLC25A36Q96CQ1 311 aa12.75□□□□□ -0.37
VRK3-201ENST00000316763 ORAI1Q96D31 301 aa12.75□□□□□ -0.37
VRK3-201ENST00000316763 KLHDC3Q9BQ90 382 aa12.75□□□□□ -0.37
VRK3-201ENST00000316763 TSPAN10Q9H1Z9 355 aaPredicted RBP12.75□□□□□ -0.37
VRK3-201ENST00000316763 OR51J1Q9H342 316 aa12.75□□□□□ -0.37
VRK3-201ENST00000316763 GHITMQ9H3K2 345 aa12.75□□□□□ -0.37
VRK3-201ENST00000316763 EMC7Q9NPA0 242 aa12.75□□□□□ -0.37
VRK3-201ENST00000316763 TAS2R5Q9NYW4 299 aa12.75□□□□□ -0.37
VRK3-201ENST00000316763 KLHL9Q9P2J3 617 aa12.75□□□□□ -0.37
VRK3-201ENST00000316763 TMED7Q9Y3B3 224 aa12.75□□□□□ -0.37
VRK3-201ENST00000316763 HS3ST3B1Q9Y662 390 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms