RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 SCARB1Q8WTV0 552 aa13.49□□□□□ -0.25
TFE3-201ENST00000315869 C15orf40Q8WUR7 153 aa13.49□□□□□ -0.25
TFE3-201ENST00000315869 CENPMQ9NSP4 180 aa13.49□□□□□ -0.25
TFE3-201ENST00000315869 TAS2R3Q9NYW6 316 aa13.49□□□□□ -0.25
TFE3-201ENST00000315869 MTFP1Q9UDX5 166 aa13.49□□□□□ -0.25
TFE3-201ENST00000315869 UPK3AO75631 287 aa13.49□□□□□ -0.25
TFE3-201ENST00000315869 CSF1P09603 554 aa13.49□□□□□ -0.25
TFE3-201ENST00000315869 THEGLP0DJG4 465 aa13.49□□□□□ -0.25
TFE3-201ENST00000315869 EIF1AXP47813 144 aaKnown RBP13.49□□□□□ -0.25
TFE3-201ENST00000315869 DNASE1L1P49184 302 aa13.49□□□□□ -0.25
TFE3-201ENST00000315869 GPAT4Q86UL3 456 aa13.49□□□□□ -0.25
TFE3-201ENST00000315869 STPG2Q8N412 459 aa13.49□□□□□ -0.25
TFE3-201ENST00000315869 MAP3K3Q99759 626 aa13.49□□□□□ -0.25
TFE3-201ENST00000315869 KLHDC3Q9BQ90 382 aa13.49□□□□□ -0.25
TFE3-201ENST00000315869 POFUT1Q9H488 388 aa13.49□□□□□ -0.25
TFE3-201ENST00000315869 PLEKHA1Q9HB21 404 aa13.49□□□□□ -0.25
TFE3-201ENST00000315869 CKLFQ9UBR5 152 aa13.49□□□□□ -0.25
TFE3-201ENST00000315869 KIF25Q9UIL4 384 aa13.49□□□□□ -0.25
TFE3-201ENST00000315869 ATXN7L1Q9ULK2 861 aaPredicted RBP13.49□□□□□ -0.25
TFE3-201ENST00000315869 MMP17Q9ULZ9 603 aa13.49□□□□□ -0.25
TFE3-201ENST00000315869 MOKQ9UQ07 419 aa13.49□□□□□ -0.25
TFE3-201ENST00000315869 OR5K3A6NET4 321 aa13.48□□□□□ -0.25
TFE3-201ENST00000315869 PRR19A6NJB7 356 aa13.48□□□□□ -0.25
TFE3-201ENST00000315869 OR4C45A6NMZ5 311 aa13.48□□□□□ -0.25
TFE3-201ENST00000315869 XRCC3O43542 346 aa13.48□□□□□ -0.25
TFE3-201ENST00000315869 IGHV4-34P06331 123 aa13.48□□□□□ -0.25
TFE3-201ENST00000315869 CD2P06729 351 aa13.48□□□□□ -0.25
TFE3-201ENST00000315869 MYF5P13349 255 aa13.48□□□□□ -0.25
TFE3-201ENST00000315869 S1PR1P21453 382 aa13.48□□□□□ -0.25
TFE3-201ENST00000315869 VAMP1P23763 118 aa13.48□□□□□ -0.25
TFE3-201ENST00000315869 WDR38Q5JTN6 314 aa13.48□□□□□ -0.25
TFE3-201ENST00000315869 MDGA2Q7Z553 956 aa13.48□□□□□ -0.25
TFE3-201ENST00000315869 SLC51BQ86UW2 128 aa13.48□□□□□ -0.25
TFE3-201ENST00000315869 EID2Q8N6I1 236 aa13.48□□□□□ -0.25
TFE3-201ENST00000315869 MARVELD3Q96A59 401 aa13.48□□□□□ -0.25
TFE3-201ENST00000315869 DHDHQ9UQ10 334 aa13.48□□□□□ -0.25
TFE3-201ENST00000315869 ETV7Q9Y603 341 aa13.48□□□□□ -0.25
TFE3-201ENST00000315869 SNRPGP15A8MWD9 76 aa13.48□□□□□ -0.25
TFE3-201ENST00000315869 SOX1O00570 391 aaPredicted RBP13.48□□□□□ -0.25
TFE3-201ENST00000315869 ITGA5P08648 1049 aa13.48□□□□□ -0.25
TFE3-201ENST00000315869 GLYATL3Q5SZD4 288 aa13.48□□□□□ -0.25
TFE3-201ENST00000315869 KCTD20Q7Z5Y7 419 aa13.48□□□□□ -0.25
TFE3-201ENST00000315869 FAM46BQ96A09 425 aa13.48□□□□□ -0.25
TFE3-201ENST00000315869 TINAGL1Q9GZM7 467 aaPredicted RBP13.48□□□□□ -0.25
TFE3-201ENST00000315869 MMP25Q9NPA2 562 aa13.48□□□□□ -0.25
TFE3-201ENST00000315869 PRDM6Q9NQX0 595 aa13.48□□□□□ -0.25
TFE3-201ENST00000315869 KCNMB2Q9Y691 235 aa13.48□□□□□ -0.25
TFE3-201ENST00000315869 FANCMQ8IYD8 2048 aa13.48□□□□□ -0.25
TFE3-201ENST00000315869 IGKV1D-42A0A075B6H8 117 aa13.48□□□□□ -0.25
TFE3-201ENST00000315869 MBTPS2O43462 519 aa13.48□□□□□ -0.25
TFE3-201ENST00000315869 CTAG2O75638 210 aa13.48□□□□□ -0.25
TFE3-201ENST00000315869 CYB5AP00167 134 aa13.48□□□□□ -0.25
TFE3-201ENST00000315869 RLN2P04090 185 aa13.48□□□□□ -0.25
TFE3-201ENST00000315869 ADAM8P78325 824 aa13.48□□□□□ -0.25
TFE3-201ENST00000315869 HLA-DQA1Q5Y7H0 255 aa13.48□□□□□ -0.25
TFE3-201ENST00000315869 OLFML2AQ68BL7 652 aa13.48□□□□□ -0.25
TFE3-201ENST00000315869 TMEM205Q6UW68 189 aa13.48□□□□□ -0.25
TFE3-201ENST00000315869 KCTD9Q7L273 389 aa13.48□□□□□ -0.25
TFE3-201ENST00000315869 C12orf45Q8N5I9 185 aaPredicted RBP13.48□□□□□ -0.25
TFE3-201ENST00000315869 ZNF321PQ8N8H1 164 aa13.48□□□□□ -0.25
TFE3-201ENST00000315869 TAS2R8Q9NYW2 309 aa13.48□□□□□ -0.25
TFE3-201ENST00000315869 ZNF230Q9UIE0 474 aaPredicted RBP13.48□□□□□ -0.25
TFE3-201ENST00000315869 IL5P05113 134 aa13.47□□□□□ -0.25
TFE3-201ENST00000315869 GABRA1P14867 456 aa13.47□□□□□ -0.25
TFE3-201ENST00000315869 CPN1P15169 458 aa13.47□□□□□ -0.25
TFE3-201ENST00000315869 GNALP38405 381 aa13.47□□□□□ -0.25
TFE3-201ENST00000315869 ETFDHQ16134 617 aa13.47□□□□□ -0.25
TFE3-201ENST00000315869 MESTQ5EB52 335 aa13.47□□□□□ -0.25
TFE3-201ENST00000315869 ACBD4Q8NC06 268 aa13.47□□□□□ -0.25
TFE3-201ENST00000315869 NXF5Q9H1B4 397 aaKnown RBP13.47□□□□□ -0.25
TFE3-201ENST00000315869 UBE2ZQ9H832 354 aaPredicted RBP13.47□□□□□ -0.25
TFE3-201ENST00000315869 UBQLN4Q9NRR5 601 aa13.47□□□□□ -0.25
TFE3-201ENST00000315869 RABL2AQ9UBK7 228 aaPredicted RBP13.47□□□□□ -0.25
TFE3-201ENST00000315869 RABL2BQ9UNT1 228 aa13.47□□□□□ -0.25
TFE3-201ENST00000315869 RNF215Q9Y6U7 377 aa13.47□□□□□ -0.25
TFE3-201ENST00000315869 TMEM82A0PJX8 343 aa13.47□□□□□ -0.25
TFE3-201ENST00000315869 TMEM212A6NML5 194 aa13.47□□□□□ -0.25
TFE3-201ENST00000315869 ZNF264O43296 627 aa13.47□□□□□ -0.25
TFE3-201ENST00000315869 HOXD4P09016 255 aaPredicted RBP13.47□□□□□ -0.25
TFE3-201ENST00000315869 PNMTP11086 282 aa13.47□□□□□ -0.25
TFE3-201ENST00000315869 ZP3P21754 424 aa13.47□□□□□ -0.25
TFE3-201ENST00000315869 OR1D4P47884 311 aa13.47□□□□□ -0.25
TFE3-201ENST00000315869 AKR1C2P52895 323 aa13.47□□□□□ -0.25
TFE3-201ENST00000315869 MRPS21P82921 87 aaKnown RBP13.47□□□□□ -0.25
TFE3-201ENST00000315869 AKR1C1Q04828 323 aa13.47□□□□□ -0.25
TFE3-201ENST00000315869 ZNF141Q15928 474 aa13.47□□□□□ -0.25
TFE3-201ENST00000315869 MARCH3Q86UD3 253 aa13.47□□□□□ -0.25
TFE3-201ENST00000315869 TSTD1Q8NFU3 115 aa13.47□□□□□ -0.25
TFE3-201ENST00000315869 STK35Q8TDR2 534 aa13.47□□□□□ -0.25
TFE3-201ENST00000315869 CMTM3Q96MX0 182 aa13.47□□□□□ -0.25
TFE3-201ENST00000315869 TSPAN32Q96QS1 320 aa13.47□□□□□ -0.25
TFE3-201ENST00000315869 GPR160Q9UJ42 338 aa13.47□□□□□ -0.25
TFE3-201ENST00000315869 TMEM14AQ9Y6G1 99 aa13.47□□□□□ -0.25
TFE3-201ENST00000315869 ZNF749O43361 778 aa13.46□□□□□ -0.25
TFE3-201ENST00000315869 SMAD2Q15796 467 aaKnown RBP13.46□□□□□ -0.25
TFE3-201ENST00000315869 PRAMEF17Q5VTA0 474 aa13.46□□□□□ -0.25
TFE3-201ENST00000315869 LRRTM1Q86UE6 522 aa13.46□□□□□ -0.25
TFE3-201ENST00000315869 STEAP2Q8NFT2 490 aa13.46□□□□□ -0.25
TFE3-201ENST00000315869 OR10K1Q8NGX5 313 aa13.46□□□□□ -0.25
TFE3-201ENST00000315869 PMM1Q92871 262 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms