RNA–Protein interactions for RNA: ENST00000313708.10

EBF1-201, Transcript of early B cell factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBF1, Length 5,250 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-201ENST00000313708 CHST9Q7L1S5 443 aa11.29□□□□□ -0.6
EBF1-201ENST00000313708 ZNF467Q7Z7K2 595 aaPredicted RBP11.29□□□□□ -0.6
EBF1-201ENST00000313708 CCNL2Q96S94 520 aaPredicted RBP11.29□□□□□ -0.6
EBF1-201ENST00000313708 SLC35B3Q9H1N7 401 aa11.29□□□□□ -0.6
EBF1-201ENST00000313708 SLCO5A1Q9H2Y9 848 aa11.29□□□□□ -0.6
EBF1-201ENST00000313708 CSNK1G1Q9HCP0 422 aa11.29□□□□□ -0.6
EBF1-201ENST00000313708 GPR173Q9NS66 373 aa11.29□□□□□ -0.6
EBF1-201ENST00000313708 ZNF443Q9Y2A4 671 aaPredicted RBP11.29□□□□□ -0.6
EBF1-201ENST00000313708 CHD5Q8TDI0 1954 aa11.29□□□□□ -0.6
EBF1-201ENST00000313708 IFNA1P01562 189 aa11.29□□□□□ -0.6
EBF1-201ENST00000313708 TYRP1P17643 537 aa11.29□□□□□ -0.6
EBF1-201ENST00000313708 VASPP50552 380 aaPredicted RBP11.29□□□□□ -0.6
EBF1-201ENST00000313708 ACTR1AP61163 376 aa11.29□□□□□ -0.6
EBF1-201ENST00000313708 RAB11AP62491 216 aa11.29□□□□□ -0.6
EBF1-201ENST00000313708 OR1Q1Q15612 314 aa11.29□□□□□ -0.6
EBF1-201ENST00000313708 ARSIQ5FYB1 569 aa11.29□□□□□ -0.6
EBF1-201ENST00000313708 DCST2Q5T1A1 773 aa11.29□□□□□ -0.6
EBF1-201ENST00000313708 TMEM244Q5VVB8 128 aa11.29□□□□□ -0.6
EBF1-201ENST00000313708 NKAIN2Q5VXU1 208 aa11.29□□□□□ -0.6
EBF1-201ENST00000313708 SGPP2Q8IWX5 399 aa11.29□□□□□ -0.6
EBF1-201ENST00000313708 OR5AP2Q8NGF4 316 aa11.29□□□□□ -0.6
EBF1-201ENST00000313708 CCDC3Q9BQI4 270 aa11.29□□□□□ -0.6
EBF1-201ENST00000313708 NSA2O95478 260 aaKnown RBP11.29□□□□□ -0.6
EBF1-201ENST00000313708 AK1P00568 194 aa11.29□□□□□ -0.6
EBF1-201ENST00000313708 GUCA1AP43080 201 aaPredicted RBP11.29□□□□□ -0.6
EBF1-201ENST00000313708 RPL7L1Q6DKI1 246 aaKnown RBP11.29□□□□□ -0.6
EBF1-201ENST00000313708 SPNS3Q6ZMD2 512 aa11.29□□□□□ -0.6
EBF1-201ENST00000313708 OR4D6Q8NGJ1 314 aa11.29□□□□□ -0.6
EBF1-201ENST00000313708 NEK7Q8TDX7 302 aa11.29□□□□□ -0.6
EBF1-201ENST00000313708 ASB16Q96NS5 453 aa11.29□□□□□ -0.6
EBF1-201ENST00000313708 UBQLN4Q9NRR5 601 aa11.29□□□□□ -0.6
EBF1-201ENST00000313708 OR14J1Q9UGF5 321 aa11.29□□□□□ -0.6
EBF1-201ENST00000313708 KCND3Q9UK17 655 aa11.29□□□□□ -0.6
EBF1-201ENST00000313708 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.29□□□□□ -0.6
EBF1-201ENST00000313708 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.29□□□□□ -0.6
EBF1-201ENST00000313708 HOXD9P28356 352 aaPredicted RBP11.29□□□□□ -0.6
EBF1-201ENST00000313708 DHODHQ02127 395 aa11.29□□□□□ -0.6
EBF1-201ENST00000313708 PMS2P11Q13670 270 aa11.29□□□□□ -0.6
EBF1-201ENST00000313708 OR4C11Q6IEV9 310 aa11.29□□□□□ -0.6
EBF1-201ENST00000313708 DND1Q8IYX4 353 aaKnown RBP11.29□□□□□ -0.6
EBF1-201ENST00000313708 OR4S1Q8NGB4 309 aa11.29□□□□□ -0.6
EBF1-201ENST00000313708 FAM210BQ96KR6 192 aa11.29□□□□□ -0.6
EBF1-201ENST00000313708 TMEM14AQ9Y6G1 99 aa11.29□□□□□ -0.6
EBF1-201ENST00000313708 A0A0U1RQK1 487 aa11.28□□□□□ -0.6
EBF1-201ENST00000313708 OR2W5A6NFC9 320 aa11.28□□□□□ -0.6
EBF1-201ENST00000313708 A6NIZ1 184 aa11.28□□□□□ -0.6
EBF1-201ENST00000313708 PPP5D1E7EU14 171 aa11.28□□□□□ -0.6
EBF1-201ENST00000313708 PEX11BO96011 259 aa11.28□□□□□ -0.6
EBF1-201ENST00000313708 RAP1BP61224 184 aa11.28□□□□□ -0.6
EBF1-201ENST00000313708 ADIRFQ15847 76 aa11.28□□□□□ -0.6
EBF1-201ENST00000313708 C2orf68Q2NKX9 166 aa11.28□□□□□ -0.6
EBF1-201ENST00000313708 GDF6Q6KF10 455 aaPredicted RBP11.28□□□□□ -0.6
EBF1-201ENST00000313708 SCGB1C1Q8TD33 95 aa11.28□□□□□ -0.6
EBF1-201ENST00000313708 PCBD2Q9H0N5 130 aa11.28□□□□□ -0.6
EBF1-201ENST00000313708 RBM7Q9Y580 266 aaKnown RBP11.28□□□□□ -0.6
EBF1-201ENST00000313708 RAB27BO00194 218 aa11.28□□□□□ -0.6
EBF1-201ENST00000313708 CLDN4O14493 209 aa11.28□□□□□ -0.6
EBF1-201ENST00000313708 IFNA5P01569 189 aa11.28□□□□□ -0.6
EBF1-201ENST00000313708 GALTP07902 379 aa11.28□□□□□ -0.6
EBF1-201ENST00000313708 SNRPCP09234 159 aaKnown RBP11.28□□□□□ -0.6
EBF1-201ENST00000313708 OMGP23515 440 aa11.28□□□□□ -0.6
EBF1-201ENST00000313708 TMEM255AQ5JRV8 349 aa11.28□□□□□ -0.6
EBF1-201ENST00000313708 PPP1R3BQ86XI6 285 aa11.28□□□□□ -0.6
EBF1-201ENST00000313708 ZNF740Q8NDX6 193 aa11.28□□□□□ -0.6
EBF1-201ENST00000313708 GPR119Q8TDV5 335 aa11.28□□□□□ -0.6
EBF1-201ENST00000313708 TVP23CQ96ET8 276 aa11.28□□□□□ -0.6
EBF1-201ENST00000313708 MISP3Q96FF7 219 aa11.28□□□□□ -0.6
EBF1-201ENST00000313708 CASD1Q96PB1 797 aa11.28□□□□□ -0.6
EBF1-201ENST00000313708 NMNAT3Q96T66 252 aa11.28□□□□□ -0.6
EBF1-201ENST00000313708 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.28□□□□□ -0.6
EBF1-201ENST00000313708 CBLN4Q9NTU7 201 aa11.28□□□□□ -0.6
EBF1-201ENST00000313708 NEUROG3Q9Y4Z2 214 aa11.28□□□□□ -0.6
EBF1-201ENST00000313708 MOSPD3O75425 235 aa11.28□□□□□ -0.6
EBF1-201ENST00000313708 PI3P19957 117 aa11.28□□□□□ -0.6
EBF1-201ENST00000313708 SLC6A12P48065 614 aa11.28□□□□□ -0.6
EBF1-201ENST00000313708 CCSMST1Q4G0I0 132 aa11.28□□□□□ -0.6
EBF1-201ENST00000313708 DBX2Q6ZNG2 339 aa11.28□□□□□ -0.6
EBF1-201ENST00000313708 SUSD3Q96L08 255 aa11.28□□□□□ -0.6
EBF1-201ENST00000313708 XKRY2A2RUG3 117 aa11.28□□□□□ -0.6
EBF1-201ENST00000313708 CX3CR1P49238 355 aa11.28□□□□□ -0.6
EBF1-201ENST00000313708 PGFP49763 221 aa11.28□□□□□ -0.6
EBF1-201ENST00000313708 ELAVL2Q12926 359 aaKnown RBP11.28□□□□□ -0.6
EBF1-201ENST00000313708 DUSP28Q4G0W2 176 aa11.28□□□□□ -0.6
EBF1-201ENST00000313708 GLYATL3Q5SZD4 288 aa11.28□□□□□ -0.6
EBF1-201ENST00000313708 MAML2Q8IZL2 1156 aaPredicted RBP11.28□□□□□ -0.6
EBF1-201ENST00000313708 RNF181Q9P0P0 153 aa11.28□□□□□ -0.6
EBF1-201ENST00000313708 DICER1Q9UPY3 1922 aaKnown RBP11.28□□□□□ -0.6
EBF1-201ENST00000313708 PHLPP1O60346 1717 aa11.27□□□□□ -0.6
EBF1-201ENST00000313708 A0A1W2PPE3 182 aa11.27□□□□□ -0.6
EBF1-201ENST00000313708 M0QZK8 103 aa11.27□□□□□ -0.6
EBF1-201ENST00000313708 GGCTO75223 188 aaKnown RBP11.27□□□□□ -0.6
EBF1-201ENST00000313708 CNMDO75829 334 aa11.27□□□□□ -0.6
EBF1-201ENST00000313708 GJB5O95377 273 aa11.27□□□□□ -0.6
EBF1-201ENST00000313708 SPIN3Q5JUX0 258 aa11.27□□□□□ -0.6
EBF1-201ENST00000313708 ZNF429Q86V71 674 aa11.27□□□□□ -0.6
EBF1-201ENST00000313708 TMEM40Q8WWA1 233 aa11.27□□□□□ -0.6
EBF1-201ENST00000313708 TOMM40LQ969M1 308 aa11.27□□□□□ -0.6
EBF1-201ENST00000313708 NKX3-1Q99801 234 aaPredicted RBP11.27□□□□□ -0.6
EBF1-201ENST00000313708 CDK5RAP2Q96SN8 1893 aa11.27□□□□□ -0.61
EBF1-201ENST00000313708 SLCO4C1Q6ZQN7 724 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms