RNA–Protein interactions for RNA: ENST00000311351.8

LSM1-201, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM1, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-201ENST00000311351 FAM157BP0CG42 384 aa14.04□□□□□ -0.16
LSM1-201ENST00000311351 RHCEP18577 417 aa14.04□□□□□ -0.16
LSM1-201ENST00000311351 RPL4P36578 427 aaKnown RBP14.04□□□□□ -0.16
LSM1-201ENST00000311351 LIMS1P48059 325 aa14.04□□□□□ -0.16
LSM1-201ENST00000311351 PDLIM4P50479 330 aa14.04□□□□□ -0.16
LSM1-201ENST00000311351 MRPS34P82930 218 aaKnown RBP14.04□□□□□ -0.16
LSM1-201ENST00000311351 MXRA7P84157 204 aa14.04□□□□□ -0.16
LSM1-201ENST00000311351 DGCR6Q14129 220 aa14.04□□□□□ -0.16
LSM1-201ENST00000311351 SEC23BQ15437 767 aa14.04□□□□□ -0.16
LSM1-201ENST00000311351 KRTAP21-3Q3LHN1 58 aa14.04□□□□□ -0.16
LSM1-201ENST00000311351 IQCCQ4KMZ1 466 aa14.04□□□□□ -0.16
LSM1-201ENST00000311351 SAMD4BQ5PRF9 694 aaKnown RBP14.04□□□□□ -0.16
LSM1-201ENST00000311351 FAM205BPQ63HN1 556 aa14.04□□□□□ -0.16
LSM1-201ENST00000311351 TMPRSS11FQ6ZWK6 438 aa14.04□□□□□ -0.16
LSM1-201ENST00000311351 RRM2BQ7LG56 351 aa14.04□□□□□ -0.16
LSM1-201ENST00000311351 LRP11Q86VZ4 500 aa14.04□□□□□ -0.16
LSM1-201ENST00000311351 DEFB107AQ8IZN7 70 aa14.04□□□□□ -0.16
LSM1-201ENST00000311351 OR52J3Q8NH60 311 aa14.04□□□□□ -0.16
LSM1-201ENST00000311351 TPK1Q9H3S4 243 aa14.04□□□□□ -0.16
LSM1-201ENST00000311351 GORASP2Q9H8Y8 452 aa14.04□□□□□ -0.16
LSM1-201ENST00000311351 CDH20Q9HBT6 801 aa14.04□□□□□ -0.16
LSM1-201ENST00000311351 MYEF2Q9P2K5 600 aaKnown RBP14.04□□□□□ -0.16
LSM1-201ENST00000311351 TMEM5Q9Y2B1 443 aa14.04□□□□□ -0.16
LSM1-201ENST00000311351 SPEF1Q9Y4P9 236 aa14.04□□□□□ -0.16
LSM1-201ENST00000311351 VSTM5A8MXK1 200 aa14.03□□□□□ -0.16
LSM1-201ENST00000311351 CD5LO43866 347 aa14.03□□□□□ -0.16
LSM1-201ENST00000311351 MGRN1O60291 552 aa14.03□□□□□ -0.16
LSM1-201ENST00000311351 TP53P04637 393 aaPredicted RBP14.03□□□□□ -0.16
LSM1-201ENST00000311351 NR2C1P13056 603 aa14.03□□□□□ -0.16
LSM1-201ENST00000311351 ZNF32P17041 273 aa14.03□□□□□ -0.16
LSM1-201ENST00000311351 APEX1P27695 318 aaKnown RBP14.03□□□□□ -0.16
LSM1-201ENST00000311351 GLRXP35754 106 aa14.03□□□□□ -0.16
LSM1-201ENST00000311351 MAD2L1BPQ15013 274 aaPredicted RBP14.03□□□□□ -0.16
LSM1-201ENST00000311351 SGCAQ16586 387 aa14.03□□□□□ -0.16
LSM1-201ENST00000311351 TMEM249Q2WGJ8 235 aa14.03□□□□□ -0.16
LSM1-201ENST00000311351 ANKDD1AQ495B1 522 aa14.03□□□□□ -0.16
LSM1-201ENST00000311351 ZBED5Q49AG3 693 aa14.03□□□□□ -0.16
LSM1-201ENST00000311351 MESTQ5EB52 335 aa14.03□□□□□ -0.16
LSM1-201ENST00000311351 PABPC1L2AQ5JQF8 200 aa14.03□□□□□ -0.16
LSM1-201ENST00000311351 C16orf89Q6UX73 402 aa14.03□□□□□ -0.16
LSM1-201ENST00000311351 DPPA2Q7Z7J5 298 aa14.03□□□□□ -0.16
LSM1-201ENST00000311351 ARIH2OSQ8N7S6 290 aa14.03□□□□□ -0.16
LSM1-201ENST00000311351 PYURFQ96I23 114 aa14.03□□□□□ -0.16
LSM1-201ENST00000311351 DHRS1Q96LJ7 313 aa14.03□□□□□ -0.16
LSM1-201ENST00000311351 Q96M85 177 aa14.03□□□□□ -0.16
LSM1-201ENST00000311351 CCT8L2Q96SF2 557 aa14.03□□□□□ -0.16
LSM1-201ENST00000311351 SIAEQ9HAT2 523 aa14.03□□□□□ -0.16
LSM1-201ENST00000311351 SLC7A8Q9UHI5 535 aa14.03□□□□□ -0.16
LSM1-201ENST00000311351 A0A1W2PPL8 197 aa14.02□□□□□ -0.17
LSM1-201ENST00000311351 A6NIZ1 184 aa14.02□□□□□ -0.17
LSM1-201ENST00000311351 VWC2LB2RUY7 222 aa14.02□□□□□ -0.17
LSM1-201ENST00000311351 ADRA2AP08913 450 aa14.02□□□□□ -0.17
LSM1-201ENST00000311351 ALDH3B1P43353 468 aa14.02□□□□□ -0.17
LSM1-201ENST00000311351 OMPP47874 163 aa14.02□□□□□ -0.17
LSM1-201ENST00000311351 RAP1BP61224 184 aa14.02□□□□□ -0.17
LSM1-201ENST00000311351 ERVS71-1P61550 626 aa14.02□□□□□ -0.17
LSM1-201ENST00000311351 RPS23P62266 143 aaKnown RBP14.02□□□□□ -0.17
LSM1-201ENST00000311351 RAP1AP62834 184 aa14.02□□□□□ -0.17
LSM1-201ENST00000311351 SPIBQ01892 262 aa14.02□□□□□ -0.17
LSM1-201ENST00000311351 HSF2Q03933 536 aa14.02□□□□□ -0.17
LSM1-201ENST00000311351 LOXL1Q08397 574 aaPredicted RBP14.02□□□□□ -0.17
LSM1-201ENST00000311351 GGTLC2Q14390 218 aa14.02□□□□□ -0.17
LSM1-201ENST00000311351 TBC1D28Q2M2D7 210 aa14.02□□□□□ -0.17
LSM1-201ENST00000311351 THSD4Q6ZMP0 1018 aa14.02□□□□□ -0.17
LSM1-201ENST00000311351 FAM122BQ7Z309 247 aa14.02□□□□□ -0.17
LSM1-201ENST00000311351 FITM2Q8N6M3 262 aa14.02□□□□□ -0.17
LSM1-201ENST00000311351 CPEB3Q8NE35 698 aaKnown RBP14.02□□□□□ -0.17
LSM1-201ENST00000311351 RASD2Q96D21 266 aa14.02□□□□□ -0.17
LSM1-201ENST00000311351 RSRC1Q96IZ7 334 aaKnown RBP14.02□□□□□ -0.17
LSM1-201ENST00000311351 NSMCE2Q96MF7 247 aa14.02□□□□□ -0.17
LSM1-201ENST00000311351 ZNF570Q96NI8 536 aa14.02□□□□□ -0.17
LSM1-201ENST00000311351 RBP7Q96R05 134 aa14.02□□□□□ -0.17
LSM1-201ENST00000311351 PIMREGQ9BSJ6 248 aa14.02□□□□□ -0.17
LSM1-201ENST00000311351 FUZQ9BT04 418 aa14.02□□□□□ -0.17
LSM1-201ENST00000311351 RAB1BQ9H0U4 201 aa14.02□□□□□ -0.17
LSM1-201ENST00000311351 C1orf198Q9H425 327 aa14.02□□□□□ -0.17
LSM1-201ENST00000311351 CCNB1IP1Q9NPC3 277 aa14.02□□□□□ -0.17
LSM1-201ENST00000311351 YAE1D1Q9NRH1 226 aa14.02□□□□□ -0.17
LSM1-201ENST00000311351 IL20RAQ9UHF4 553 aa14.02□□□□□ -0.17
LSM1-201ENST00000311351 MALRD1Q5VYJ5 2156 aa14.02□□□□□ -0.17
LSM1-201ENST00000311351 TEX13CA0A0J9YWL9 993 aa14.01□□□□□ -0.17
LSM1-201ENST00000311351 IQCMA0A1B0GVH7 501 aa14.01□□□□□ -0.17
LSM1-201ENST00000311351 M0R233 179 aa14.01□□□□□ -0.17
LSM1-201ENST00000311351 SYNGR3O43761 229 aa14.01□□□□□ -0.17
LSM1-201ENST00000311351 FAM107AO95990 144 aa14.01□□□□□ -0.17
LSM1-201ENST00000311351 CD14P08571 375 aa14.01□□□□□ -0.17
LSM1-201ENST00000311351 LAP3P28838 519 aa14.01□□□□□ -0.17
LSM1-201ENST00000311351 FXYD6P3P58550 94 aa14.01□□□□□ -0.17
LSM1-201ENST00000311351 PLP2Q04941 152 aa14.01□□□□□ -0.17
LSM1-201ENST00000311351 KRT72Q14CN4 511 aa14.01□□□□□ -0.17
LSM1-201ENST00000311351 THEM4Q5T1C6 240 aa14.01□□□□□ -0.17
LSM1-201ENST00000311351 FOXL2NBQ6ZUU3 175 aa14.01□□□□□ -0.17
LSM1-201ENST00000311351 AKR7LQ8NHP1 331 aa14.01□□□□□ -0.17
LSM1-201ENST00000311351 FOXN4Q96NZ1 517 aa14.01□□□□□ -0.17
LSM1-201ENST00000311351 GPA33Q99795 319 aa14.01□□□□□ -0.17
LSM1-201ENST00000311351 GRHPRQ9UBQ7 328 aa14.01□□□□□ -0.17
LSM1-201ENST00000311351 DUSP13Q9UII6 198 aa14.01□□□□□ -0.17
LSM1-201ENST00000311351 FBXO9Q9UK97 447 aaPredicted RBP14.01□□□□□ -0.17
LSM1-201ENST00000311351 AURKCQ9UQB9 309 aa14.01□□□□□ -0.17
LSM1-201ENST00000311351 SIGLEC7Q9Y286 467 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms