RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 RNF208Q9H0X6 261 aa13.11□□□□□ -0.31
CDT1-201ENST00000301019 K7ESM1 405 aa13.11□□□□□ -0.31
CDT1-201ENST00000301019 EMC8O43402 210 aa13.11□□□□□ -0.31
CDT1-201ENST00000301019 C1orf105O95561 183 aa13.11□□□□□ -0.31
CDT1-201ENST00000301019 AGAP20933 346 aa13.11□□□□□ -0.31
CDT1-201ENST00000301019 HGFACQ04756 655 aa13.11□□□□□ -0.31
CDT1-201ENST00000301019 TMEM115Q12893 351 aaPredicted RBP13.11□□□□□ -0.31
CDT1-201ENST00000301019 LINC00471Q8N535 108 aa13.11□□□□□ -0.31
CDT1-201ENST00000301019 ACBD4Q8NC06 268 aa13.11□□□□□ -0.31
CDT1-201ENST00000301019 ADAMTS15Q8TE58 950 aa13.11□□□□□ -0.31
CDT1-201ENST00000301019 EFCAB11Q9BUY7 163 aa13.11□□□□□ -0.31
CDT1-201ENST00000301019 SRA1Q9HD15 236 aaKnown RBP13.11□□□□□ -0.31
CDT1-201ENST00000301019 DOK5Q9P104 306 aa13.11□□□□□ -0.31
CDT1-201ENST00000301019 CGGBP1Q9UFW8 167 aaPredicted RBP13.11□□□□□ -0.31
CDT1-201ENST00000301019 PHYHO14832 338 aa13.11□□□□□ -0.31
CDT1-201ENST00000301019 MPC1LP0DKB6 136 aa13.11□□□□□ -0.31
CDT1-201ENST00000301019 PSMA3P25788 255 aa13.11□□□□□ -0.31
CDT1-201ENST00000301019 KHKP50053 298 aa13.11□□□□□ -0.31
CDT1-201ENST00000301019 TAS2R43P59537 309 aa13.11□□□□□ -0.31
CDT1-201ENST00000301019 PRAMEF14Q5SWL7 426 aa13.11□□□□□ -0.31
CDT1-201ENST00000301019 ZNF385CQ66K41 422 aaPredicted RBP13.11□□□□□ -0.31
CDT1-201ENST00000301019 Q6ZRG5 221 aa13.11□□□□□ -0.31
CDT1-201ENST00000301019 GALNTL5Q7Z4T8 443 aa13.11□□□□□ -0.31
CDT1-201ENST00000301019 MRGPREQ86SM8 312 aa13.11□□□□□ -0.31
CDT1-201ENST00000301019 ZNF676Q8N7Q3 588 aa13.11□□□□□ -0.31
CDT1-201ENST00000301019 ZSCAN4Q8NAM6 433 aaPredicted RBP13.11□□□□□ -0.31
CDT1-201ENST00000301019 TMEM239Q8WW34 195 aa13.11□□□□□ -0.31
CDT1-201ENST00000301019 RAB7BQ96AH8 199 aa13.11□□□□□ -0.31
CDT1-201ENST00000301019 MMP26Q9NRE1 261 aa13.11□□□□□ -0.31
CDT1-201ENST00000301019 RCL1Q9Y2P8 373 aaKnown RBP13.11□□□□□ -0.31
CDT1-201ENST00000301019 MBP02144 154 aa13.1□□□□□ -0.31
CDT1-201ENST00000301019 BDH1Q02338 343 aa13.1□□□□□ -0.31
CDT1-201ENST00000301019 C14orf28Q4W4Y0 310 aa13.1□□□□□ -0.31
CDT1-201ENST00000301019 NKAIN2Q5VXU1 208 aa13.1□□□□□ -0.31
CDT1-201ENST00000301019 GLB1LQ6UWU2 654 aa13.1□□□□□ -0.31
CDT1-201ENST00000301019 ZNF813Q6ZN06 617 aa13.1□□□□□ -0.31
CDT1-201ENST00000301019 METTL27Q8N6F8 245 aaPredicted RBP13.1□□□□□ -0.31
CDT1-201ENST00000301019 CHST4Q8NCG5 386 aa13.1□□□□□ -0.31
CDT1-201ENST00000301019 OR2AP1Q8NGE2 309 aa13.1□□□□□ -0.31
CDT1-201ENST00000301019 MIB2Q96AX9 1013 aa13.1□□□□□ -0.31
CDT1-201ENST00000301019 RASD2Q96D21 266 aa13.1□□□□□ -0.31
CDT1-201ENST00000301019 TCEAL2Q9H3H9 227 aaPredicted RBP13.1□□□□□ -0.31
CDT1-201ENST00000301019 OR5AC2Q9NZP5 309 aa13.1□□□□□ -0.31
CDT1-201ENST00000301019 PCDHB8Q9UN66 801 aa13.1□□□□□ -0.31
CDT1-201ENST00000301019 IGHV2-5P01817 119 aa13.1□□□□□ -0.31
CDT1-201ENST00000301019 CCL5P13501 91 aa13.1□□□□□ -0.31
CDT1-201ENST00000301019 EPCAMP16422 314 aa13.1□□□□□ -0.31
CDT1-201ENST00000301019 NUBP1P53384 320 aa13.1□□□□□ -0.31
CDT1-201ENST00000301019 LSM6P62312 80 aaKnown RBP13.1□□□□□ -0.31
CDT1-201ENST00000301019 RPP30P78346 268 aaKnown RBP13.1□□□□□ -0.31
CDT1-201ENST00000301019 C15orf54Q8N8G6 183 aa13.1□□□□□ -0.31
CDT1-201ENST00000301019 NUP43Q8NFH3 380 aa13.1□□□□□ -0.31
CDT1-201ENST00000301019 ZNF563Q8TA94 476 aa13.1□□□□□ -0.31
CDT1-201ENST00000301019 TSEN15Q8WW01 171 aaKnown RBP13.1□□□□□ -0.31
CDT1-201ENST00000301019 CNRIP1Q96F85 164 aaPredicted RBP13.1□□□□□ -0.31
CDT1-201ENST00000301019 ACTRT3Q9BYD9 372 aa13.1□□□□□ -0.31
CDT1-201ENST00000301019 RHBGQ9H310 441 aa13.1□□□□□ -0.31
CDT1-201ENST00000301019 SYNDIG1Q9H7V2 258 aa13.1□□□□□ -0.31
CDT1-201ENST00000301019 PLEKHA1Q9HB21 404 aa13.1□□□□□ -0.31
CDT1-201ENST00000301019 ADAP2Q9NPF8 381 aa13.1□□□□□ -0.31
CDT1-201ENST00000301019 ZNF840PA6NDX5 716 aa13.09□□□□□ -0.31
CDT1-201ENST00000301019 CCKBRP32239 447 aa13.09□□□□□ -0.31
CDT1-201ENST00000301019 OR1D2P34982 312 aa13.09□□□□□ -0.31
CDT1-201ENST00000301019 SULT1A1P50225 295 aa13.09□□□□□ -0.31
CDT1-201ENST00000301019 RAB5CP51148 216 aa13.09□□□□□ -0.31
CDT1-201ENST00000301019 LMAN2Q12907 356 aa13.09□□□□□ -0.31
CDT1-201ENST00000301019 GAS6Q14393 721 aa13.09□□□□□ -0.31
CDT1-201ENST00000301019 OVCH1Q7RTY7 1134 aa13.09□□□□□ -0.31
CDT1-201ENST00000301019 PRSS58Q8IYP2 241 aa13.09□□□□□ -0.31
CDT1-201ENST00000301019 SETD7Q8WTS6 366 aaKnown RBP13.09□□□□□ -0.31
CDT1-201ENST00000301019 VSIG4Q9Y279 399 aa13.09□□□□□ -0.31
CDT1-201ENST00000301019 DOCK8Q8NF50 2099 aa13.09□□□□□ -0.31
CDT1-201ENST00000301019 CD74P04233 296 aa13.09□□□□□ -0.31
CDT1-201ENST00000301019 ERCC1P07992 297 aaPredicted RBP13.09□□□□□ -0.31
CDT1-201ENST00000301019 MMP7P09237 267 aaPredicted RBP13.09□□□□□ -0.31
CDT1-201ENST00000301019 RNH1P13489 461 aaKnown RBP13.09□□□□□ -0.31
CDT1-201ENST00000301019 BSGP35613 385 aa13.09□□□□□ -0.31
CDT1-201ENST00000301019 TAS2R38P59533 333 aa13.09□□□□□ -0.31
CDT1-201ENST00000301019 LRRC69Q6ZNQ3 347 aa13.09□□□□□ -0.31
CDT1-201ENST00000301019 GAREM2Q75VX8 874 aa13.09□□□□□ -0.31
CDT1-201ENST00000301019 NRROSQ86YC3 692 aa13.09□□□□□ -0.31
CDT1-201ENST00000301019 SP7Q8TDD2 431 aaPredicted RBP13.09□□□□□ -0.31
CDT1-201ENST00000301019 CCDC107Q8WV48 283 aa13.09□□□□□ -0.31
CDT1-201ENST00000301019 OR8D1Q8WZ84 308 aa13.09□□□□□ -0.31
CDT1-201ENST00000301019 AHSPQ9NZD4 102 aa13.09□□□□□ -0.31
CDT1-201ENST00000301019 MSRAQ9UJ68 235 aa13.09□□□□□ -0.31
CDT1-201ENST00000301019 WDR45Q9Y484 360 aa13.09□□□□□ -0.31
CDT1-201ENST00000301019 ERI3O43414 337 aaKnown RBP13.09□□□□□ -0.31
CDT1-201ENST00000301019 SOCS5O75159 536 aa13.09□□□□□ -0.31
CDT1-201ENST00000301019 ITGA10O75578 1167 aa13.09□□□□□ -0.31
CDT1-201ENST00000301019 CTAG2O75638 210 aa13.09□□□□□ -0.31
CDT1-201ENST00000301019 SLCO2B1O94956 709 aa13.09□□□□□ -0.31
CDT1-201ENST00000301019 SFTPBP07988 381 aa13.09□□□□□ -0.31
CDT1-201ENST00000301019 LAMP2P13473 410 aa13.09□□□□□ -0.31
CDT1-201ENST00000301019 ZNF25P17030 456 aaPredicted RBP13.09□□□□□ -0.31
CDT1-201ENST00000301019 MAPK8P45983 427 aa13.09□□□□□ -0.31
CDT1-201ENST00000301019 CDK20Q8IZL9 346 aa13.09□□□□□ -0.31
CDT1-201ENST00000301019 OCSTAMPQ9BR26 566 aa13.09□□□□□ -0.31
CDT1-201ENST00000301019 CMC2Q9NRP2 79 aa13.09□□□□□ -0.31
CDT1-201ENST00000301019 LPAR3Q9UBY5 353 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms