RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 MTNR1BP49286 362 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 WDR5BQ86VZ2 330 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 WDSUB1Q8N9V3 476 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 MMP28Q9H239 520 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 SLC22A11Q9NSA0 550 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 GFOD1Q9NXC2 390 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 P4HTMQ9NXG6 502 aa16.93■□□□□ 0.3
PCDH1-201ENST00000287008 M0R296 226 aa16.92■□□□□ 0.3
PCDH1-201ENST00000287008 SPINT2O43291 252 aa16.92■□□□□ 0.3
PCDH1-201ENST00000287008 POU2F2P09086 479 aa16.92■□□□□ 0.3
PCDH1-201ENST00000287008 ZNF26P17031 533 aaPredicted RBP16.92■□□□□ 0.3
PCDH1-201ENST00000287008 EDDM3AQ14507 147 aa16.92■□□□□ 0.3
PCDH1-201ENST00000287008 FGFBP1Q14512 234 aa16.92■□□□□ 0.3
PCDH1-201ENST00000287008 ZNF620Q6ZNG0 422 aa16.92■□□□□ 0.3
PCDH1-201ENST00000287008 WWTR1Q9GZV5 400 aa16.92■□□□□ 0.3
PCDH1-201ENST00000287008 GPR55Q9Y2T6 319 aaPredicted RBP16.92■□□□□ 0.3
PCDH1-201ENST00000287008 ATP23Q9Y6H3 246 aa16.92■□□□□ 0.3
PCDH1-201ENST00000287008 OR2W5A6NFC9 320 aa16.92■□□□□ 0.3
PCDH1-201ENST00000287008 MT-ND4P03905 459 aa16.92■□□□□ 0.3
PCDH1-201ENST00000287008 ETV6P41212 452 aa16.92■□□□□ 0.3
PCDH1-201ENST00000287008 SNRPGP62308 76 aaKnown RBP16.92■□□□□ 0.3
PCDH1-201ENST00000287008 PAN3Q58A45 887 aaKnown RBP16.92■□□□□ 0.3
PCDH1-201ENST00000287008 LPCAT3Q6P1A2 487 aa16.92■□□□□ 0.3
PCDH1-201ENST00000287008 SFXN4Q6P4A7 337 aa16.92■□□□□ 0.3
PCDH1-201ENST00000287008 DOK3Q7L591 496 aa16.92■□□□□ 0.3
PCDH1-201ENST00000287008 MAFIPQ8WZ33 124 aa16.92■□□□□ 0.3
PCDH1-201ENST00000287008 SLC25A37Q9NYZ2 338 aa16.92■□□□□ 0.3
PCDH1-201ENST00000287008 IGLV3-16A0A075B6K0 115 aa16.92■□□□□ 0.3
PCDH1-201ENST00000287008 C5orf67F2Z3F1 127 aa16.92■□□□□ 0.3
PCDH1-201ENST00000287008 DRD3P35462 400 aa16.92■□□□□ 0.3
PCDH1-201ENST00000287008 NR4A2P43354 598 aa16.92■□□□□ 0.3
PCDH1-201ENST00000287008 THEM4Q5T1C6 240 aa16.92■□□□□ 0.3
PCDH1-201ENST00000287008 SLC22A25Q6T423 547 aa16.92■□□□□ 0.3
PCDH1-201ENST00000287008 APOOLQ6UXV4 268 aa16.92■□□□□ 0.3
PCDH1-201ENST00000287008 WFDC8Q8IUA0 241 aa16.92■□□□□ 0.3
PCDH1-201ENST00000287008 SDSLQ96GA7 329 aa16.92■□□□□ 0.3
PCDH1-201ENST00000287008 OXGR1Q96P68 337 aa16.92■□□□□ 0.3
PCDH1-201ENST00000287008 SNX18Q96RF0 628 aa16.92■□□□□ 0.3
PCDH1-201ENST00000287008 UBL7Q96S82 380 aaPredicted RBP16.92■□□□□ 0.3
PCDH1-201ENST00000287008 SPNS1Q9H2V7 528 aa16.92■□□□□ 0.3
PCDH1-201ENST00000287008 PRELID3BQ9Y3B1 194 aa16.92■□□□□ 0.3
PCDH1-201ENST00000287008 HDGFL3Q9Y3E1 203 aa16.92■□□□□ 0.3
PCDH1-201ENST00000287008 PPM1DO15297 605 aa16.92■□□□□ 0.3
PCDH1-201ENST00000287008 GUSBP08236 651 aa16.92■□□□□ 0.3
PCDH1-201ENST00000287008 SELEP16581 610 aa16.92■□□□□ 0.3
PCDH1-201ENST00000287008 TMEM81Q6P7N7 255 aa16.92■□□□□ 0.3
PCDH1-201ENST00000287008 ANKRD53Q8N9V6 530 aa16.92■□□□□ 0.3
PCDH1-201ENST00000287008 OR5T1Q8NG75 326 aa16.92■□□□□ 0.3
PCDH1-201ENST00000287008 TXNL4BQ9NX01 149 aaKnown RBP16.92■□□□□ 0.3
PCDH1-201ENST00000287008 ZNF195O14628 629 aa16.91■□□□□ 0.3
PCDH1-201ENST00000287008 SUMO3P55854 103 aaPredicted RBP16.91■□□□□ 0.3
PCDH1-201ENST00000287008 RPL18Q07020 188 aaKnown RBP16.91■□□□□ 0.3
PCDH1-201ENST00000287008 EIF2S3LQ2VIR3 472 aaKnown RBP16.91■□□□□ 0.3
PCDH1-201ENST00000287008 DND1Q8IYX4 353 aaKnown RBP16.91■□□□□ 0.3
PCDH1-201ENST00000287008 OR51D1Q8NGF3 324 aa16.91■□□□□ 0.3
PCDH1-201ENST00000287008 INTS12Q96CB8 462 aaKnown RBP16.91■□□□□ 0.3
PCDH1-201ENST00000287008 OR5M11Q96RB7 305 aa16.91■□□□□ 0.3
PCDH1-201ENST00000287008 ZNF649Q9BS31 505 aa16.91■□□□□ 0.3
PCDH1-201ENST00000287008 RTL8AQ9BWD3 113 aa16.91■□□□□ 0.3
PCDH1-201ENST00000287008 SLC25A31Q9H0C2 315 aa16.91■□□□□ 0.3
PCDH1-201ENST00000287008 HRASLSQ9HDD0 168 aa16.91■□□□□ 0.3
PCDH1-201ENST00000287008 CMC2Q9NRP2 79 aa16.91■□□□□ 0.3
PCDH1-201ENST00000287008 NHSL2Q5HYW2 709 aa16.91■□□□□ 0.3
PCDH1-201ENST00000287008 SPNS2Q8IVW8 549 aa16.91■□□□□ 0.3
PCDH1-201ENST00000287008 ADGRF3Q8IZF5 1079 aa16.91■□□□□ 0.3
PCDH1-201ENST00000287008 DTWD2Q8NBA8 298 aa16.91■□□□□ 0.3
PCDH1-201ENST00000287008 GPBAR1Q8TDU6 330 aa16.91■□□□□ 0.3
PCDH1-201ENST00000287008 OR2A14Q96R47 310 aa16.91■□□□□ 0.3
PCDH1-201ENST00000287008 TIMM8BQ9Y5J9 83 aaPredicted RBP16.91■□□□□ 0.3
PCDH1-201ENST00000287008 HRO43593 1189 aa16.91■□□□□ 0.3
PCDH1-201ENST00000287008 ZNF254O75437 659 aa16.91■□□□□ 0.3
PCDH1-201ENST00000287008 NCR1O76036 304 aa16.91■□□□□ 0.3
PCDH1-201ENST00000287008 ARR3P36575 388 aa16.91■□□□□ 0.3
PCDH1-201ENST00000287008 PIGAP37287 484 aa16.91■□□□□ 0.3
PCDH1-201ENST00000287008 CD79BP40259 229 aa16.91■□□□□ 0.3
PCDH1-201ENST00000287008 ZNF136P52737 540 aa16.91■□□□□ 0.3
PCDH1-201ENST00000287008 TRIP6Q15654 476 aaKnown RBP16.91■□□□□ 0.3
PCDH1-201ENST00000287008 SPACA1Q9HBV2 294 aa16.91■□□□□ 0.3
PCDH1-201ENST00000287008 KIF25Q9UIL4 384 aa16.91■□□□□ 0.3
PCDH1-201ENST00000287008 ZNF346Q9UL40 294 aaKnown RBP16.91■□□□□ 0.3
PCDH1-201ENST00000287008 LAMB1P07942 1786 aa16.91■□□□□ 0.3
PCDH1-201ENST00000287008 SLC22A20A6NK97 555 aa16.9■□□□□ 0.3
PCDH1-201ENST00000287008 EFSO43281 561 aa16.9■□□□□ 0.3
PCDH1-201ENST00000287008 ACHEP22303 614 aa16.9■□□□□ 0.3
PCDH1-201ENST00000287008 GFRALQ6UXV0 394 aa16.9■□□□□ 0.3
PCDH1-201ENST00000287008 A0A1W2PPV4 95 aa16.9■□□□□ 0.3
PCDH1-201ENST00000287008 NDUFB7P17568 137 aa16.9■□□□□ 0.3
PCDH1-201ENST00000287008 SLC9A3R2Q15599 337 aa16.9■□□□□ 0.3
PCDH1-201ENST00000287008 OR8G1Q15617 311 aa16.9■□□□□ 0.3
PCDH1-201ENST00000287008 PDLIM3Q53GG5 364 aaPredicted RBP16.9■□□□□ 0.3
PCDH1-201ENST00000287008 ANGPTL5Q86XS5 388 aa16.9■□□□□ 0.3
PCDH1-201ENST00000287008 NAXDQ8IW45 347 aa16.9■□□□□ 0.3
PCDH1-201ENST00000287008 OR5AS1Q8N127 324 aa16.9■□□□□ 0.3
PCDH1-201ENST00000287008 CLDN22Q8N7P3 220 aa16.9■□□□□ 0.3
PCDH1-201ENST00000287008 EMG1Q92979 244 aaKnown RBP16.9■□□□□ 0.3
PCDH1-201ENST00000287008 FAM3DQ96BQ1 224 aa16.9■□□□□ 0.3
PCDH1-201ENST00000287008 ABHD6Q9BV23 337 aa16.9■□□□□ 0.3
PCDH1-201ENST00000287008 SLC5A6Q9Y289 635 aa16.9■□□□□ 0.3
PCDH1-201ENST00000287008 ZNF891A8MT65 544 aaPredicted RBP16.9■□□□□ 0.3
PCDH1-201ENST00000287008 APOC3P02656 99 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms