RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 IGLV1-36A0A0B4J1U3 117 aa13.72□□□□□ -0.21
SF3B4-201ENST00000271628 TRAV1-2A0A0B4J238 106 aa13.72□□□□□ -0.21
SF3B4-201ENST00000271628 ZNF593O00488 134 aaPredicted RBP13.72□□□□□ -0.21
SF3B4-201ENST00000271628 LIFP15018 202 aa13.72□□□□□ -0.21
SF3B4-201ENST00000271628 DPP4P27487 766 aa13.72□□□□□ -0.21
SF3B4-201ENST00000271628 MADCAM1Q13477 382 aa13.72□□□□□ -0.21
SF3B4-201ENST00000271628 CSRP2Q16527 193 aa13.72□□□□□ -0.21
SF3B4-201ENST00000271628 C6orf183Q5T699 404 aa13.72□□□□□ -0.21
SF3B4-201ENST00000271628 IDNKQ5T6J7 187 aa13.72□□□□□ -0.21
SF3B4-201ENST00000271628 HES3Q5TGS1 186 aa13.72□□□□□ -0.21
SF3B4-201ENST00000271628 LIPNQ5VXI9 398 aa13.72□□□□□ -0.21
SF3B4-201ENST00000271628 YIPF7Q8N8F6 280 aa13.72□□□□□ -0.21
SF3B4-201ENST00000271628 RELTQ969Z4 430 aa13.72□□□□□ -0.21
SF3B4-201ENST00000271628 CREB3L1Q96BA8 519 aa13.72□□□□□ -0.21
SF3B4-201ENST00000271628 OR5B2Q96R09 309 aa13.72□□□□□ -0.21
SF3B4-201ENST00000271628 GON7Q9BXV9 100 aa13.72□□□□□ -0.21
SF3B4-201ENST00000271628 B3GNT4Q9C0J1 378 aa13.72□□□□□ -0.21
SF3B4-201ENST00000271628 NIPAL2Q9H841 368 aa13.72□□□□□ -0.21
SF3B4-201ENST00000271628 ING3Q9NXR8 418 aa13.72□□□□□ -0.21
SF3B4-201ENST00000271628 EXTL2Q9UBQ6 330 aa13.72□□□□□ -0.21
SF3B4-201ENST00000271628 ZNF281Q9Y2X9 895 aa13.72□□□□□ -0.21
SF3B4-201ENST00000271628 ALG5Q9Y673 324 aa13.72□□□□□ -0.21
SF3B4-201ENST00000271628 A0A1W2PNU3 283 aaPredicted RBP13.71□□□□□ -0.21
SF3B4-201ENST00000271628 DVL2O14641 736 aa13.71□□□□□ -0.21
SF3B4-201ENST00000271628 P04436 131 aa13.71□□□□□ -0.21
SF3B4-201ENST00000271628 CTLA4P16410 223 aa13.71□□□□□ -0.21
SF3B4-201ENST00000271628 DLSTP36957 453 aa13.71□□□□□ -0.21
SF3B4-201ENST00000271628 PSMB10P40306 273 aa13.71□□□□□ -0.21
SF3B4-201ENST00000271628 RAB25P57735 213 aa13.71□□□□□ -0.21
SF3B4-201ENST00000271628 Q0VFX4 171 aa13.71□□□□□ -0.21
SF3B4-201ENST00000271628 FAPQ12884 760 aa13.71□□□□□ -0.21
SF3B4-201ENST00000271628 GLRX5Q86SX6 157 aa13.71□□□□□ -0.21
SF3B4-201ENST00000271628 GNRHR2Q96P88 292 aa13.71□□□□□ -0.21
SF3B4-201ENST00000271628 KCNK17Q96T54 332 aa13.71□□□□□ -0.21
SF3B4-201ENST00000271628 TSPAN10Q9H1Z9 355 aaPredicted RBP13.71□□□□□ -0.21
SF3B4-201ENST00000271628 MRM2Q9UI43 246 aaKnown RBP13.71□□□□□ -0.21
SF3B4-201ENST00000271628 IKZF2Q9UKS7 526 aa13.71□□□□□ -0.21
SF3B4-201ENST00000271628 EML6Q6ZMW3 1958 aa13.71□□□□□ -0.21
SF3B4-201ENST00000271628 PSMD9O00233 223 aa13.71□□□□□ -0.21
SF3B4-201ENST00000271628 LRP3O75074 770 aa13.71□□□□□ -0.21
SF3B4-201ENST00000271628 UPK3AO75631 287 aa13.71□□□□□ -0.21
SF3B4-201ENST00000271628 OR8G3PP0DMU2 310 aa13.71□□□□□ -0.21
SF3B4-201ENST00000271628 RBMS1P29558 406 aaKnown RBP13.71□□□□□ -0.21
SF3B4-201ENST00000271628 ZNF239Q16600 458 aaKnown RBP13.71□□□□□ -0.21
SF3B4-201ENST00000271628 ACER2Q5QJU3 275 aa13.71□□□□□ -0.21
SF3B4-201ENST00000271628 HACD4Q5VWC8 232 aa13.71□□□□□ -0.21
SF3B4-201ENST00000271628 ZNF57Q68EA5 555 aaPredicted RBP13.71□□□□□ -0.21
SF3B4-201ENST00000271628 TMEM225Q6GV28 225 aa13.71□□□□□ -0.21
SF3B4-201ENST00000271628 SLC18B1Q6NT16 456 aa13.71□□□□□ -0.21
SF3B4-201ENST00000271628 KCTD18Q6PI47 426 aaPredicted RBP13.71□□□□□ -0.21
SF3B4-201ENST00000271628 UNQ9370/PRO34162Q6UXP9 181 aa13.71□□□□□ -0.21
SF3B4-201ENST00000271628 HDDC2Q7Z4H3 204 aa13.71□□□□□ -0.21
SF3B4-201ENST00000271628 NR2C2APQ86WQ0 139 aa13.71□□□□□ -0.21
SF3B4-201ENST00000271628 UEVLDQ8IX04 471 aa13.71□□□□□ -0.21
SF3B4-201ENST00000271628 OR5M1Q8NGP8 315 aa13.71□□□□□ -0.21
SF3B4-201ENST00000271628 TRIM63Q969Q1 353 aa13.71□□□□□ -0.21
SF3B4-201ENST00000271628 UPRTQ96BW1 309 aa13.71□□□□□ -0.21
SF3B4-201ENST00000271628 PDCD1LG2Q9BQ51 273 aa13.71□□□□□ -0.21
SF3B4-201ENST00000271628 MFRPQ9BY79 579 aa13.71□□□□□ -0.21
SF3B4-201ENST00000271628 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.71□□□□□ -0.21
SF3B4-201ENST00000271628 PPIL3Q9H2H8 161 aaKnown RBP13.71□□□□□ -0.21
SF3B4-201ENST00000271628 CCDC86Q9H6F5 360 aaKnown RBP13.71□□□□□ -0.21
SF3B4-201ENST00000271628 BOLA1Q9Y3E2 137 aa13.71□□□□□ -0.21
SF3B4-201ENST00000271628 SDK2Q58EX2 2172 aa13.71□□□□□ -0.22
SF3B4-201ENST00000271628 PRR32B1ATL7 298 aa13.7□□□□□ -0.22
SF3B4-201ENST00000271628 ZNF879B4DU55 563 aa13.7□□□□□ -0.22
SF3B4-201ENST00000271628 C1QBP02746 253 aa13.7□□□□□ -0.22
SF3B4-201ENST00000271628 UCHL1P09936 223 aa13.7□□□□□ -0.22
SF3B4-201ENST00000271628 ZNF17P17021 662 aa13.7□□□□□ -0.22
SF3B4-201ENST00000271628 GZMKP49863 264 aa13.7□□□□□ -0.22
SF3B4-201ENST00000271628 RPS11P62280 158 aaKnown RBP eCLIP13.7□□□□□ -0.22
SF3B4-201ENST00000271628 BTG1P62324 171 aa13.7□□□□□ -0.22
SF3B4-201ENST00000271628 ADAM8P78325 824 aa13.7□□□□□ -0.22
SF3B4-201ENST00000271628 SLC35A1P78382 337 aa13.7□□□□□ -0.22
SF3B4-201ENST00000271628 ALKBH1Q13686 389 aaKnown RBP13.7□□□□□ -0.22
SF3B4-201ENST00000271628 TMEM176BQ3YBM2 270 aaPredicted RBP13.7□□□□□ -0.22
SF3B4-201ENST00000271628 JMJD6Q6NYC1 403 aaPredicted RBP13.7□□□□□ -0.22
SF3B4-201ENST00000271628 ZNF454Q8N9F8 522 aa13.7□□□□□ -0.22
SF3B4-201ENST00000271628 ZFAND1Q8TCF1 268 aa13.7□□□□□ -0.22
SF3B4-201ENST00000271628 RBP7Q96R05 134 aa13.7□□□□□ -0.22
SF3B4-201ENST00000271628 BEX2Q9BXY8 128 aa13.7□□□□□ -0.22
SF3B4-201ENST00000271628 PLSCR3Q9NRY6 295 aa13.7□□□□□ -0.22
SF3B4-201ENST00000271628 COA3Q9Y2R0 106 aaPredicted RBP13.7□□□□□ -0.22
SF3B4-201ENST00000271628 KLHDC2Q9Y2U9 406 aa13.7□□□□□ -0.22
SF3B4-201ENST00000271628 TTC28Q96AY4 2481 aa13.7□□□□□ -0.22
SF3B4-201ENST00000271628 A0A0G2JMP0 313 aa13.7□□□□□ -0.22
SF3B4-201ENST00000271628 A0A0X1KG70 313 aa13.7□□□□□ -0.22
SF3B4-201ENST00000271628 ANKRD34BA5PLL1 514 aa13.7□□□□□ -0.22
SF3B4-201ENST00000271628 INMT-MINDY4F8WBC2 141 aa13.7□□□□□ -0.22
SF3B4-201ENST00000271628 MASP2O00187 686 aa13.7□□□□□ -0.22
SF3B4-201ENST00000271628 SULT2B1O00204 365 aa13.7□□□□□ -0.22
SF3B4-201ENST00000271628 RPP14O95059 124 aaKnown RBP13.7□□□□□ -0.22
SF3B4-201ENST00000271628 PMS2P2O95744 297 aa13.7□□□□□ -0.22
SF3B4-201ENST00000271628 ABHD16AO95870 558 aa13.7□□□□□ -0.22
SF3B4-201ENST00000271628 GPANK1O95872 356 aa13.7□□□□□ -0.22
SF3B4-201ENST00000271628 ARSBP15848 533 aa13.7□□□□□ -0.22
SF3B4-201ENST00000271628 RAB3BP20337 219 aa13.7□□□□□ -0.22
SF3B4-201ENST00000271628 NPR2P20594 1047 aa13.7□□□□□ -0.22
SF3B4-201ENST00000271628 SLC6A1P30531 599 aa13.7□□□□□ -0.22
SF3B4-201ENST00000271628 SFTPDP35247 375 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms