RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 A0A0A6YYC8 382 aaPredicted RBP10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 ZNF726A6NNF4 738 aa10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 E9PI62 339 aa10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 I3L1I5 382 aaPredicted RBP10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 HSPA12AO43301 675 aa10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 SEMG1P04279 462 aa10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 SULT1A3P0DMM9 295 aa10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 SULT1A4P0DMN0 295 aa10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 CLUP10909 449 aa10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 ZNF28P17035 718 aa10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 ACHEP22303 614 aa10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 HTR2CP28335 458 aa10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 SELENOPP49908 381 aa10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 ACY1Q03154 408 aa10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 FZD2Q14332 565 aa10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 GXYLT1Q4G148 440 aa10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 ZNF704Q6ZNC4 412 aaPredicted RBP10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 OR1M1Q8NGA1 313 aa10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 NT5CQ8TCD5 201 aa10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 EDAQ92838 391 aa10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 SORCS2Q96PQ0 1159 aa10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 SDF2Q99470 211 aa10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 SLCO5A1Q9H2Y9 848 aa10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 EVA1AQ9H8M9 152 aa10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 SMCO4Q9NRQ5 59 aa10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 C7orf66A4D0T2 115 aa10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 PYCARD-AS1I3L0S3 204 aa10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 PLPP2O43688 288 aa10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 LANCL1O43813 399 aa10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 ZNF254O75437 659 aa10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 IL5P05113 134 aa10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 CBR1P16152 277 aa10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 CSNK2A1P68400 391 aaPredicted RBP10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 PLA1AQ53H76 456 aa10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 DPY19L2P2Q6ZN68 376 aa10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 CSNK2A3Q8NEV1 391 aa10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 BAHD1Q8TBE0 780 aaPredicted RBP10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 GIMAP5Q96F15 307 aa10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 ZNF764Q96H86 408 aaPredicted RBP10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 FOXN4Q96NZ1 517 aa10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 MOKQ9UQ07 419 aa10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 HELZP42694 1942 aaKnown RBP10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 LMO7DNF2Z398 122 aa10.52□□□□□ -0.72
CLSTN3-201ENST00000266546 H7C1C5 153 aa10.52□□□□□ -0.72
CLSTN3-201ENST00000266546 OIP5O43482 229 aa10.52□□□□□ -0.72
CLSTN3-201ENST00000266546 SYT7O43581 403 aa10.52□□□□□ -0.72
CLSTN3-201ENST00000266546 IGLV3-19P01714 112 aa10.52□□□□□ -0.72
CLSTN3-201ENST00000266546 SPI1P17947 270 aa10.52□□□□□ -0.72
CLSTN3-201ENST00000266546 GLP1RP43220 463 aa10.52□□□□□ -0.72
CLSTN3-201ENST00000266546 LCN6P62502 163 aa10.52□□□□□ -0.72
CLSTN3-201ENST00000266546 NR0B2Q15466 257 aa10.52□□□□□ -0.72
CLSTN3-201ENST00000266546 SLC9A3R2Q15599 337 aa10.52□□□□□ -0.72
CLSTN3-201ENST00000266546 SLC35D2Q76EJ3 337 aa10.52□□□□□ -0.72
CLSTN3-201ENST00000266546 OR4K17Q8NGC6 315 aa10.52□□□□□ -0.72
CLSTN3-201ENST00000266546 CKAP5Q14008 2032 aa10.52□□□□□ -0.73
CLSTN3-201ENST00000266546 A0A0A6YYH2 397 aa10.52□□□□□ -0.73
CLSTN3-201ENST00000266546 A6NJ64 397 aa10.52□□□□□ -0.73
CLSTN3-201ENST00000266546 MCRIP1C9JLW8 97 aa10.52□□□□□ -0.73
CLSTN3-201ENST00000266546 CER1O95813 267 aa10.52□□□□□ -0.73
CLSTN3-201ENST00000266546 HIST1H1CP16403 213 aaKnown RBP10.52□□□□□ -0.73
CLSTN3-201ENST00000266546 BDKRB2P30411 391 aa10.52□□□□□ -0.73
CLSTN3-201ENST00000266546 P2RX1P51575 399 aa10.52□□□□□ -0.73
CLSTN3-201ENST00000266546 RAB38P57729 211 aa10.52□□□□□ -0.73
CLSTN3-201ENST00000266546 ACOT7LQ6ZUV0 252 aa10.52□□□□□ -0.73
CLSTN3-201ENST00000266546 NDUFAF7Q7L592 441 aa10.52□□□□□ -0.73
CLSTN3-201ENST00000266546 NAXDQ8IW45 347 aa10.52□□□□□ -0.73
CLSTN3-201ENST00000266546 ZNF679Q8IYX0 411 aa10.52□□□□□ -0.73
CLSTN3-201ENST00000266546 ZNF283Q8N7M2 679 aa10.52□□□□□ -0.73
CLSTN3-201ENST00000266546 ZNF565Q8N9K5 539 aa10.52□□□□□ -0.73
CLSTN3-201ENST00000266546 LINC01555Q8NAE3 123 aa10.52□□□□□ -0.73
CLSTN3-201ENST00000266546 RSC1A1Q92681 617 aa10.52□□□□□ -0.73
CLSTN3-201ENST00000266546 RASD2Q96D21 266 aa10.52□□□□□ -0.73
CLSTN3-201ENST00000266546 ARSGQ96EG1 525 aa10.52□□□□□ -0.73
CLSTN3-201ENST00000266546 LMF2Q9BU23 707 aaKnown RBP10.52□□□□□ -0.73
CLSTN3-201ENST00000266546 SMIM3Q9BZL3 60 aa10.52□□□□□ -0.73
CLSTN3-201ENST00000266546 ATXN7L1Q9ULK2 861 aaPredicted RBP10.52□□□□□ -0.73
CLSTN3-201ENST00000266546 SLC22A23A1A5C7 686 aa10.52□□□□□ -0.73
CLSTN3-201ENST00000266546 SLC16A7O60669 478 aa10.52□□□□□ -0.73
CLSTN3-201ENST00000266546 HPXP02790 462 aa10.52□□□□□ -0.73
CLSTN3-201ENST00000266546 THBS1P07996 1170 aa10.52□□□□□ -0.73
CLSTN3-201ENST00000266546 HOXB5P09067 269 aa10.52□□□□□ -0.73
CLSTN3-201ENST00000266546 PTHLHP12272 177 aa10.52□□□□□ -0.73
CLSTN3-201ENST00000266546 CASRP41180 1078 aa10.52□□□□□ -0.73
CLSTN3-201ENST00000266546 Q5BKY6 102 aa10.52□□□□□ -0.73
CLSTN3-201ENST00000266546 SPIN3Q5JUX0 258 aa10.52□□□□□ -0.73
CLSTN3-201ENST00000266546 SLC35D3Q5M8T2 416 aa10.52□□□□□ -0.73
CLSTN3-201ENST00000266546 SFRP5Q5T4F7 317 aa10.52□□□□□ -0.73
CLSTN3-201ENST00000266546 TRAPPC6BQ86SZ2 158 aa10.52□□□□□ -0.73
CLSTN3-201ENST00000266546 PMM1Q92871 262 aa10.52□□□□□ -0.73
CLSTN3-201ENST00000266546 CNRIP1Q96F85 164 aaPredicted RBP10.52□□□□□ -0.73
CLSTN3-201ENST00000266546 CXorf58Q96LI9 332 aa10.52□□□□□ -0.73
CLSTN3-201ENST00000266546 Q96M85 177 aa10.52□□□□□ -0.73
CLSTN3-201ENST00000266546 ULBP3Q9BZM4 244 aa10.52□□□□□ -0.73
CLSTN3-201ENST00000266546 GAREM1Q9H706 876 aa10.52□□□□□ -0.73
CLSTN3-201ENST00000266546 GPATCH2Q9NW75 528 aa10.52□□□□□ -0.73
CLSTN3-201ENST00000266546 GPR179Q6PRD1 2367 aa10.52□□□□□ -0.73
CLSTN3-201ENST00000266546 LOC100289279A0A1B0GTE1 492 aa10.51□□□□□ -0.73
CLSTN3-201ENST00000266546 OR6C65A6NJZ3 312 aa10.51□□□□□ -0.73
CLSTN3-201ENST00000266546 TMEM200CA6NKL6 621 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms