RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 SLC36A2Q495M3 483 aa8.34□□□□□ -1.07
VPS41-201ENST00000265745 ELFN2Q5R3F8 820 aa8.34□□□□□ -1.07
VPS41-201ENST00000265745 ARMC4Q5T2S8 1044 aa8.34□□□□□ -1.07
VPS41-201ENST00000265745 TMEM53Q6P2H8 277 aa8.34□□□□□ -1.07
VPS41-201ENST00000265745 SLC16A14Q7RTX9 510 aa8.34□□□□□ -1.07
VPS41-201ENST00000265745 LILRB2Q8N423 598 aa8.34□□□□□ -1.07
VPS41-201ENST00000265745 OR2T12Q8NG77 320 aa8.34□□□□□ -1.07
VPS41-201ENST00000265745 MOSPD2Q8NHP6 518 aa8.34□□□□□ -1.07
VPS41-201ENST00000265745 ASB10Q8WXI3 467 aa8.34□□□□□ -1.07
VPS41-201ENST00000265745 NMD3Q96D46 503 aaKnown RBP8.34□□□□□ -1.07
VPS41-201ENST00000265745 C1orf159Q96HA4 380 aa8.34□□□□□ -1.07
VPS41-201ENST00000265745 RNF121Q9H920 327 aa8.34□□□□□ -1.07
VPS41-201ENST00000265745 SIAEQ9HAT2 523 aa8.34□□□□□ -1.07
VPS41-201ENST00000265745 FZR1Q9UM11 496 aa8.34□□□□□ -1.07
VPS41-201ENST00000265745 A4GNTQ9UNA3 340 aa8.34□□□□□ -1.07
VPS41-201ENST00000265745 MED31Q9Y3C7 131 aa8.34□□□□□ -1.07
VPS41-201ENST00000265745 CUBNO60494 3623 aa8.34□□□□□ -1.08
VPS41-201ENST00000265745 SLC22A23A1A5C7 686 aa8.33□□□□□ -1.08
VPS41-201ENST00000265745 ELOVL7A1L3X0 281 aa8.33□□□□□ -1.08
VPS41-201ENST00000265745 HTR3EA5X5Y0 456 aa8.33□□□□□ -1.08
VPS41-201ENST00000265745 NPIPB13A6NJU9 1138 aa8.33□□□□□ -1.08
VPS41-201ENST00000265745 FAM220BPB1ANY3 271 aa8.33□□□□□ -1.08
VPS41-201ENST00000265745 NPIPB4C9JG80 1138 aa8.33□□□□□ -1.08
VPS41-201ENST00000265745 MCIDASD6RGH6 385 aa8.33□□□□□ -1.08
VPS41-201ENST00000265745 SNAP29O95721 258 aa8.33□□□□□ -1.08
VPS41-201ENST00000265745 PTHP01270 115 aa8.33□□□□□ -1.08
VPS41-201ENST00000265745 MMP7P09237 267 aaPredicted RBP8.33□□□□□ -1.08
VPS41-201ENST00000265745 NAT2P11245 290 aa8.33□□□□□ -1.08
VPS41-201ENST00000265745 ZNF250P15622 560 aa8.33□□□□□ -1.08
VPS41-201ENST00000265745 FUT4P22083 530 aa8.33□□□□□ -1.08
VPS41-201ENST00000265745 APEX1P27695 318 aaKnown RBP8.33□□□□□ -1.08
VPS41-201ENST00000265745 DAP3P51398 398 aaKnown RBP8.33□□□□□ -1.08
VPS41-201ENST00000265745 ZNF84P51523 738 aa8.33□□□□□ -1.08
VPS41-201ENST00000265745 UCP2P55851 309 aa8.33□□□□□ -1.08
VPS41-201ENST00000265745 TMEM33P57088 247 aa8.33□□□□□ -1.08
VPS41-201ENST00000265745 MRPS11P82912 194 aaKnown RBP8.33□□□□□ -1.08
VPS41-201ENST00000265745 MRPS34P82930 218 aaKnown RBP8.33□□□□□ -1.08
VPS41-201ENST00000265745 ST3GAL3Q11203 375 aa8.33□□□□□ -1.08
VPS41-201ENST00000265745 CHD3Q12873 2000 aaKnown RBP8.33□□□□□ -1.08
VPS41-201ENST00000265745 TRIP10Q15642 601 aa8.33□□□□□ -1.08
VPS41-201ENST00000265745 CR1LQ2VPA4 569 aa8.33□□□□□ -1.08
VPS41-201ENST00000265745 LRRC23Q53EV4 343 aaPredicted RBP8.33□□□□□ -1.08
VPS41-201ENST00000265745 C10orf128Q5T292 105 aa8.33□□□□□ -1.08
VPS41-201ENST00000265745 RGS7BPQ6MZT1 257 aaPredicted RBP8.33□□□□□ -1.08
VPS41-201ENST00000265745 IL17RELQ6ZVW7 336 aa8.33□□□□□ -1.08
VPS41-201ENST00000265745 HDDC2Q7Z4H3 204 aa8.33□□□□□ -1.08
VPS41-201ENST00000265745 SLC15A3Q8IY34 581 aa8.33□□□□□ -1.08
VPS41-201ENST00000265745 MICU2Q8IYU8 434 aa8.33□□□□□ -1.08
VPS41-201ENST00000265745 LRRC18Q8N456 261 aa8.33□□□□□ -1.08
VPS41-201ENST00000265745 LINC01356Q8N9X3 169 aa8.33□□□□□ -1.08
VPS41-201ENST00000265745 CPEB3Q8NE35 698 aaKnown RBP8.33□□□□□ -1.08
VPS41-201ENST00000265745 NOXO1Q8NFA2 376 aa8.33□□□□□ -1.08
VPS41-201ENST00000265745 HDAC2Q92769 488 aaKnown RBP8.33□□□□□ -1.08
VPS41-201ENST00000265745 RDH5Q92781 318 aa8.33□□□□□ -1.08
VPS41-201ENST00000265745 TPD52L3Q96J77 140 aa8.33□□□□□ -1.08
VPS41-201ENST00000265745 SNX18Q96RF0 628 aa8.33□□□□□ -1.08
VPS41-201ENST00000265745 RACGAP1Q9H0H5 632 aa8.33□□□□□ -1.08
VPS41-201ENST00000265745 TXNIPQ9H3M7 391 aa8.33□□□□□ -1.08
VPS41-201ENST00000265745 C1orf198Q9H425 327 aa8.33□□□□□ -1.08
VPS41-201ENST00000265745 CCDC134Q9H6E4 229 aa8.33□□□□□ -1.08
VPS41-201ENST00000265745 SMURF2Q9HAU4 748 aa8.33□□□□□ -1.08
VPS41-201ENST00000265745 CDH20Q9HBT6 801 aa8.33□□□□□ -1.08
VPS41-201ENST00000265745 ZNF446Q9NWS9 450 aa8.33□□□□□ -1.08
VPS41-201ENST00000265745 CMTM6Q9NX76 183 aa8.33□□□□□ -1.08
VPS41-201ENST00000265745 ARMCX1Q9P291 453 aa8.33□□□□□ -1.08
VPS41-201ENST00000265745 STX18Q9P2W9 335 aaKnown RBP8.33□□□□□ -1.08
VPS41-201ENST00000265745 UGT2A1Q9Y4X1 527 aa8.33□□□□□ -1.08
VPS41-201ENST00000265745 SNX13Q9Y5W8 968 aa8.33□□□□□ -1.08
VPS41-201ENST00000265745 CAPN7Q9Y6W3 813 aa8.33□□□□□ -1.08
VPS41-201ENST00000265745 IGLV3-9A0A075B6K5 115 aa8.32□□□□□ -1.08
VPS41-201ENST00000265745 IGKV1D-43A0A0B4J1Z2 117 aa8.32□□□□□ -1.08
VPS41-201ENST00000265745 IQCMA0A1B0GVH7 501 aa8.32□□□□□ -1.08
VPS41-201ENST00000265745 A0A1W2PPW3 197 aa8.32□□□□□ -1.08
VPS41-201ENST00000265745 FFAR1O14842 300 aa8.32□□□□□ -1.08
VPS41-201ENST00000265745 SLC22A2O15244 555 aa8.32□□□□□ -1.08
VPS41-201ENST00000265745 PIP5K1CO60331 668 aa8.32□□□□□ -1.08
VPS41-201ENST00000265745 NCR1O76036 304 aa8.32□□□□□ -1.08
VPS41-201ENST00000265745 SLC2A10O95528 541 aa8.32□□□□□ -1.08
VPS41-201ENST00000265745 CLPTM1O96005 669 aa8.32□□□□□ -1.08
VPS41-201ENST00000265745 HNF1AP20823 631 aa8.32□□□□□ -1.08
VPS41-201ENST00000265745 ACHEP22303 614 aa8.32□□□□□ -1.08
VPS41-201ENST00000265745 CDAP32320 146 aa8.32□□□□□ -1.08
VPS41-201ENST00000265745 RAD52P43351 418 aa8.32□□□□□ -1.08
VPS41-201ENST00000265745 CDH15P55291 814 aa8.32□□□□□ -1.08
VPS41-201ENST00000265745 SELENOVP59797 346 aa8.32□□□□□ -1.08
VPS41-201ENST00000265745 ERVS71-1P61550 626 aa8.32□□□□□ -1.08
VPS41-201ENST00000265745 GUCY1A3Q02108 690 aa8.32□□□□□ -1.08
VPS41-201ENST00000265745 PLP2Q04941 152 aa8.32□□□□□ -1.08
VPS41-201ENST00000265745 FHL1Q13642 323 aa8.32□□□□□ -1.08
VPS41-201ENST00000265745 TAF11Q15544 211 aa8.32□□□□□ -1.08
VPS41-201ENST00000265745 TBC1D28Q2M2D7 210 aa8.32□□□□□ -1.08
VPS41-201ENST00000265745 KRTAP24-1Q3LI83 254 aa8.32□□□□□ -1.08
VPS41-201ENST00000265745 ALG10Q5BKT4 473 aa8.32□□□□□ -1.08
VPS41-201ENST00000265745 FAM27BQ5VT28 67 aa8.32□□□□□ -1.08
VPS41-201ENST00000265745 SLC25A47Q6Q0C1 308 aa8.32□□□□□ -1.08
VPS41-201ENST00000265745 UGT2A3Q6UWM9 527 aa8.32□□□□□ -1.08
VPS41-201ENST00000265745 VTCN1Q7Z7D3 282 aa8.32□□□□□ -1.08
VPS41-201ENST00000265745 POU5F2Q8N7G0 328 aa8.32□□□□□ -1.08
VPS41-201ENST00000265745 LRRC75AQ8NAA5 344 aa8.32□□□□□ -1.08
VPS41-201ENST00000265745 RBM15BQ8NDT2 890 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms