RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 TGM5O43548 720 aa13.8□□□□□ -0.2
CASC3-201ENST00000264645 RAD51DO75771 328 aa13.8□□□□□ -0.2
CASC3-201ENST00000264645 ZFPL1O95159 310 aa13.8□□□□□ -0.2
CASC3-201ENST00000264645 CTSLP07711 333 aa13.8□□□□□ -0.2
CASC3-201ENST00000264645 ACRP10323 421 aa13.8□□□□□ -0.2
CASC3-201ENST00000264645 PXNP49023 591 aaPredicted RBP13.8□□□□□ -0.2
CASC3-201ENST00000264645 RAP1AP62834 184 aa13.8□□□□□ -0.2
CASC3-201ENST00000264645 PJVKQ0ZLH3 352 aa13.8□□□□□ -0.2
CASC3-201ENST00000264645 PMPCAQ10713 525 aa13.8□□□□□ -0.2
CASC3-201ENST00000264645 DHRS2Q13268 280 aa13.8□□□□□ -0.2
CASC3-201ENST00000264645 CCINQ13939 588 aa13.8□□□□□ -0.2
CASC3-201ENST00000264645 OR9K2Q8NGE7 335 aa13.8□□□□□ -0.2
CASC3-201ENST00000264645 OR5D18Q8NGL1 313 aa13.8□□□□□ -0.2
CASC3-201ENST00000264645 NUBPLQ8TB37 319 aa13.8□□□□□ -0.2
CASC3-201ENST00000264645 GLYATL2Q8WU03 294 aa13.8□□□□□ -0.2
CASC3-201ENST00000264645 WNT2BQ93097 391 aa13.8□□□□□ -0.2
CASC3-201ENST00000264645 RAB7BQ96AH8 199 aa13.8□□□□□ -0.2
CASC3-201ENST00000264645 FBXO17Q96EF6 278 aa13.8□□□□□ -0.2
CASC3-201ENST00000264645 KCNJ15Q99712 375 aa13.8□□□□□ -0.2
CASC3-201ENST00000264645 ZFYVE21Q9BQ24 234 aa13.8□□□□□ -0.2
CASC3-201ENST00000264645 PLEKHJ1Q9NW61 149 aa13.8□□□□□ -0.2
CASC3-201ENST00000264645 MTFP1Q9UDX5 166 aa13.8□□□□□ -0.2
CASC3-201ENST00000264645 FOXJ3Q9UPW0 622 aa13.8□□□□□ -0.2
CASC3-201ENST00000264645 MOKQ9UQ07 419 aa13.8□□□□□ -0.2
CASC3-201ENST00000264645 MMP24Q9Y5R2 645 aa13.8□□□□□ -0.2
CASC3-201ENST00000264645 LRP3O75074 770 aa13.8□□□□□ -0.2
CASC3-201ENST00000264645 OR52W1Q6IF63 320 aa13.8□□□□□ -0.2
CASC3-201ENST00000264645 TCEAL8Q8IYN2 117 aa13.8□□□□□ -0.2
CASC3-201ENST00000264645 ATOH1Q92858 354 aaPredicted RBP13.8□□□□□ -0.2
CASC3-201ENST00000264645 NIPSNAP3BQ9BS92 247 aa13.8□□□□□ -0.2
CASC3-201ENST00000264645 VSX1Q9NZR4 365 aaPredicted RBP13.8□□□□□ -0.2
CASC3-201ENST00000264645 EXOGQ9Y2C4 368 aaKnown RBP13.8□□□□□ -0.2
CASC3-201ENST00000264645 SIRT4Q9Y6E7 314 aaPredicted RBP13.8□□□□□ -0.2
CASC3-201ENST00000264645 PHIPQ8WWQ0 1821 aa13.8□□□□□ -0.2
CASC3-201ENST00000264645 FGF18O76093 207 aa13.8□□□□□ -0.2
CASC3-201ENST00000264645 RPS2P15880 293 aaKnown RBP13.8□□□□□ -0.2
CASC3-201ENST00000264645 KLF9Q13886 244 aaPredicted RBP13.8□□□□□ -0.2
CASC3-201ENST00000264645 RGS7BPQ6MZT1 257 aaPredicted RBP13.8□□□□□ -0.2
CASC3-201ENST00000264645 GLSO94925 669 aaPredicted RBP13.79□□□□□ -0.2
CASC3-201ENST00000264645 PGCP20142 388 aa13.79□□□□□ -0.2
CASC3-201ENST00000264645 SNU13P55769 128 aaKnown RBP13.79□□□□□ -0.2
CASC3-201ENST00000264645 CLRN1P58418 232 aa13.79□□□□□ -0.2
CASC3-201ENST00000264645 RPL19P84098 196 aaKnown RBP13.79□□□□□ -0.2
CASC3-201ENST00000264645 UBXN2BQ14CS0 331 aa13.79□□□□□ -0.2
CASC3-201ENST00000264645 GUCA2BQ16661 112 aa13.79□□□□□ -0.2
CASC3-201ENST00000264645 NCMAPQ5T1S8 102 aa13.79□□□□□ -0.2
CASC3-201ENST00000264645 LDLRAD1Q5T700 205 aa13.79□□□□□ -0.2
CASC3-201ENST00000264645 THSD4Q6ZMP0 1018 aa13.79□□□□□ -0.2
CASC3-201ENST00000264645 MARCH1Q8TCQ1 289 aa13.79□□□□□ -0.2
CASC3-201ENST00000264645 THAP3Q8WTV1 239 aaPredicted RBP13.79□□□□□ -0.2
CASC3-201ENST00000264645 HOXB13Q92826 284 aaPredicted RBP13.79□□□□□ -0.2
CASC3-201ENST00000264645 ADOQ96SZ5 270 aa13.79□□□□□ -0.2
CASC3-201ENST00000264645 MCOLN1Q9GZU1 580 aa13.79□□□□□ -0.2
CASC3-201ENST00000264645 ADAM10O14672 748 aa13.79□□□□□ -0.2
CASC3-201ENST00000264645 SCGB1D1O95968 90 aa13.79□□□□□ -0.2
CASC3-201ENST00000264645 ITGB2P05107 769 aa13.79□□□□□ -0.2
CASC3-201ENST00000264645 RPA2P15927 270 aa13.79□□□□□ -0.2
CASC3-201ENST00000264645 GDI1P31150 447 aa13.79□□□□□ -0.2
CASC3-201ENST00000264645 VIPR2P41587 438 aa13.79□□□□□ -0.2
CASC3-201ENST00000264645 PCBP4P57723 403 aaKnown RBP13.79□□□□□ -0.2
CASC3-201ENST00000264645 FBXW12Q6X9E4 464 aa13.79□□□□□ -0.2
CASC3-201ENST00000264645 SKA3Q8IX90 412 aa13.79□□□□□ -0.2
CASC3-201ENST00000264645 OR10D4PQ8NGN7 298 aa13.79□□□□□ -0.2
CASC3-201ENST00000264645 TSACCQ96A04 125 aaPredicted RBP13.79□□□□□ -0.2
CASC3-201ENST00000264645 SIGLEC11Q96RL6 698 aa13.79□□□□□ -0.2
CASC3-201ENST00000264645 SERINC1Q9NRX5 453 aa13.79□□□□□ -0.2
CASC3-201ENST00000264645 MARCH5Q9NX47 278 aa13.79□□□□□ -0.2
CASC3-201ENST00000264645 ANKRD20A5PA0PJZ0 165 aa13.79□□□□□ -0.2
CASC3-201ENST00000264645 CRABP1P29762 137 aa13.79□□□□□ -0.2
CASC3-201ENST00000264645 FJX1Q86VR8 437 aa13.79□□□□□ -0.2
CASC3-201ENST00000264645 AMER3Q8N944 861 aa13.79□□□□□ -0.2
CASC3-201ENST00000264645 HPSE2Q8WWQ2 592 aa13.79□□□□□ -0.2
CASC3-201ENST00000264645 MS4A6EQ96DS6 147 aa13.79□□□□□ -0.2
CASC3-201ENST00000264645 JSRP1Q96MG2 331 aaPredicted RBP13.79□□□□□ -0.2
CASC3-201ENST00000264645 ZNF442Q9H7R0 627 aa13.79□□□□□ -0.2
CASC3-201ENST00000264645 SLC22A13Q9Y226 551 aa13.79□□□□□ -0.2
CASC3-201ENST00000264645 SEMG1P04279 462 aa13.79□□□□□ -0.2
CASC3-201ENST00000264645 SMIM6P0DI80 62 aa13.79□□□□□ -0.2
CASC3-201ENST00000264645 SLC36A2Q495M3 483 aa13.79□□□□□ -0.2
CASC3-201ENST00000264645 PUSL1Q8N0Z8 303 aaKnown RBP13.79□□□□□ -0.2
CASC3-201ENST00000264645 MORN4Q8NDC4 146 aa13.79□□□□□ -0.2
CASC3-201ENST00000264645 CASD1Q96PB1 797 aa13.79□□□□□ -0.2
CASC3-201ENST00000264645 PRO1933Q9H354 126 aa13.79□□□□□ -0.2
CASC3-201ENST00000264645 UQCC1Q9NVA1 299 aa13.79□□□□□ -0.2
CASC3-201ENST00000264645 TAS2R4Q9NYW5 299 aa13.79□□□□□ -0.2
CASC3-201ENST00000264645 PRAMEF25A6NGN4 478 aa13.78□□□□□ -0.2
CASC3-201ENST00000264645 OR6C76A6NM76 312 aa13.78□□□□□ -0.2
CASC3-201ENST00000264645 P2RY10O00398 339 aa13.78□□□□□ -0.2
CASC3-201ENST00000264645 IFNA1P01562 189 aa13.78□□□□□ -0.2
CASC3-201ENST00000264645 GABRR1P24046 479 aa13.78□□□□□ -0.2
CASC3-201ENST00000264645 CASRP41180 1078 aa13.78□□□□□ -0.2
CASC3-201ENST00000264645 F2RL1P55085 397 aa13.78□□□□□ -0.2
CASC3-201ENST00000264645 PLCXD2Q0VAA5 305 aa13.78□□□□□ -0.2
CASC3-201ENST00000264645 LYG2Q86SG7 212 aa13.78□□□□□ -0.2
CASC3-201ENST00000264645 TRMT2BQ96GJ1 504 aaKnown RBP13.78□□□□□ -0.2
CASC3-201ENST00000264645 CRLF2Q9HC73 371 aa13.78□□□□□ -0.2
CASC3-201ENST00000264645 MCM3APO60318 1980 aa13.78□□□□□ -0.2
CASC3-201ENST00000264645 A0A0A6YYC8 382 aaPredicted RBP13.78□□□□□ -0.2
CASC3-201ENST00000264645 I3L1I5 382 aaPredicted RBP13.78□□□□□ -0.2
CASC3-201ENST00000264645 CD63P08962 238 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms