RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 AKR1C1Q04828 323 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 FMODQ06828 376 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 KLHL26Q53HC5 615 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 NHLRC3Q5JS37 347 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 ELP2Q6IA86 826 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 GALNT16Q8N428 558 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 SPACA5Q96QH8 159 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 SYNDIG1Q9H7V2 258 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 CENPMQ9NSP4 180 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 STEAP1Q9UHE8 339 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 OPN4Q9UHM6 478 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 NUP50Q9UKX7 468 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 NPTNQ9Y639 398 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 KCNMB2Q9Y691 235 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 TMEM235A6NFC5 223 aa8.24□□□□□ -1.09
MSH4-201ENST00000263187 SHISA8B8ZZ34 492 aa8.24□□□□□ -1.09
MSH4-201ENST00000263187 F5H5P2 479 aa8.24□□□□□ -1.09
MSH4-201ENST00000263187 PLATP00750 562 aa8.24□□□□□ -1.09
MSH4-201ENST00000263187 AMY2AP04746 511 aa8.24□□□□□ -1.09
MSH4-201ENST00000263187 RAB40ALP0C0E4 278 aa8.24□□□□□ -1.09
MSH4-201ENST00000263187 PRSS3P35030 304 aa8.24□□□□□ -1.09
MSH4-201ENST00000263187 ZNF117Q03924 483 aa8.24□□□□□ -1.09
MSH4-201ENST00000263187 HYAL1Q12794 435 aa8.24□□□□□ -1.09
MSH4-201ENST00000263187 TAF13Q15543 124 aa8.24□□□□□ -1.09
MSH4-201ENST00000263187 ATRAIDQ6UW56 229 aa8.24□□□□□ -1.09
MSH4-201ENST00000263187 KRT77Q7Z794 578 aa8.24□□□□□ -1.09
MSH4-201ENST00000263187 CDC20BQ86Y33 519 aa8.24□□□□□ -1.09
MSH4-201ENST00000263187 ZNF615Q8N8J6 731 aa8.24□□□□□ -1.09
MSH4-201ENST00000263187 RAB40AQ8WXH6 277 aa8.24□□□□□ -1.09
MSH4-201ENST00000263187 MFFQ9GZY8 342 aa8.24□□□□□ -1.09
MSH4-201ENST00000263187 UBQLN4Q9NRR5 601 aa8.24□□□□□ -1.09
MSH4-201ENST00000263187 GPR160Q9UJ42 338 aa8.24□□□□□ -1.09
MSH4-201ENST00000263187 PLEKHA6Q9Y2H5 1048 aa8.24□□□□□ -1.09
MSH4-201ENST00000263187 XRCC3O43542 346 aa8.24□□□□□ -1.09
MSH4-201ENST00000263187 PRAF2O60831 178 aa8.24□□□□□ -1.09
MSH4-201ENST00000263187 IGHV4-34P06331 123 aa8.24□□□□□ -1.09
MSH4-201ENST00000263187 GIPP09681 153 aaPredicted RBP8.24□□□□□ -1.09
MSH4-201ENST00000263187 CTLA4P16410 223 aa8.24□□□□□ -1.09
MSH4-201ENST00000263187 CD1CP29017 333 aa8.24□□□□□ -1.09
MSH4-201ENST00000263187 RAG2P55895 527 aa8.24□□□□□ -1.09
MSH4-201ENST00000263187 SKP2Q13309 424 aa8.24□□□□□ -1.09
MSH4-201ENST00000263187 FZD2Q14332 565 aa8.24□□□□□ -1.09
MSH4-201ENST00000263187 RBMS2Q15434 407 aaKnown RBP8.24□□□□□ -1.09
MSH4-201ENST00000263187 ACKR1Q16570 336 aa8.24□□□□□ -1.09
MSH4-201ENST00000263187 DEFB133Q30KQ1 61 aa8.24□□□□□ -1.09
MSH4-201ENST00000263187 SLC35D3Q5M8T2 416 aa8.24□□□□□ -1.09
MSH4-201ENST00000263187 ASPHD2Q6ICH7 369 aa8.24□□□□□ -1.09
MSH4-201ENST00000263187 TSSK4Q6SA08 328 aa8.24□□□□□ -1.09
MSH4-201ENST00000263187 PRSS42Q7Z5A4 293 aa8.24□□□□□ -1.09
MSH4-201ENST00000263187 FAM71CQ8NEG0 241 aa8.24□□□□□ -1.09
MSH4-201ENST00000263187 OR2AK2Q8NG84 335 aa8.24□□□□□ -1.09
MSH4-201ENST00000263187 CASTOR1Q8WTX7 329 aa8.24□□□□□ -1.09
MSH4-201ENST00000263187 WNT2BQ93097 391 aa8.24□□□□□ -1.09
MSH4-201ENST00000263187 KLHL15Q96M94 604 aa8.24□□□□□ -1.09
MSH4-201ENST00000263187 SLC38A3Q99624 504 aa8.24□□□□□ -1.09
MSH4-201ENST00000263187 TMEM185BQ9H7F4 350 aa8.24□□□□□ -1.09
MSH4-201ENST00000263187 POLE3Q9NRF9 147 aa8.24□□□□□ -1.09
MSH4-201ENST00000263187 HIF3AQ9Y2N7 669 aa8.24□□□□□ -1.09
MSH4-201ENST00000263187 EMC9Q9Y3B6 208 aa8.24□□□□□ -1.09
MSH4-201ENST00000263187 OR2M5A3KFT3 312 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 H7C417 338 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 SLC25A12O75746 678 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 PPP3CBP16298 524 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 ARRB1P49407 418 aaPredicted RBP8.23□□□□□ -1.09
MSH4-201ENST00000263187 RAP2BP61225 183 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 RAB11BQ15907 218 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 OR52W1Q6IF63 320 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 STEAP1BQ6NZ63 245 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 SEZ6L2Q6UXD5 910 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 GSG1LQ6UXU4 331 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 RHOUQ7L0Q8 258 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 GVQW1Q8N7I0 195 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 CHST4Q8NCG5 386 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 OR1J2Q8NGS2 313 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 GPBAR1Q8TDU6 330 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 LMX1AQ8TE12 382 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 PTPMT1Q8WUK0 201 aaPredicted RBP8.23□□□□□ -1.09
MSH4-201ENST00000263187 ST8SIA4Q92187 359 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 PDCD10Q9BUL8 212 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 PLEKHA1Q9HB21 404 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 ZC4H2Q9NQZ6 224 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 MTFP1Q9UDX5 166 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 CD207Q9UJ71 328 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 A0A1W2PPC1 479 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 NAP1L6A6NFF2 107 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 PCP4L1A6NKN8 68 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 ATP6V1G2-DDX39BF2Z307 99 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 ASAH2BP0C7U1 165 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 CALCBP10092 127 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 MAPK3P27361 379 aaPredicted RBP8.23□□□□□ -1.09
MSH4-201ENST00000263187 DLX5P56178 289 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 DEFA5Q01523 94 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 EIF2B1Q14232 305 aaKnown RBP8.23□□□□□ -1.09
MSH4-201ENST00000263187 ELFN2Q5R3F8 820 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 SLC6A19Q695T7 634 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 SDR16C5Q8N3Y7 309 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 ZNF454Q8N9F8 522 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 LRRC75AQ8NAA5 344 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 ZSCAN1Q8NBB4 408 aa8.23□□□□□ -1.09
MSH4-201ENST00000263187 OR1J4Q8NGS1 313 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms