RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 TAS2R5Q9NYW4 299 aa14.78□□□□□ -0.04
SDCBP-201ENST00000260130 UGT2A1Q9Y4X1 527 aa14.78□□□□□ -0.04
SDCBP-201ENST00000260130 A0A087WUU8 490 aa14.77□□□□□ -0.04
SDCBP-201ENST00000260130 CASKO14936 926 aa14.77□□□□□ -0.04
SDCBP-201ENST00000260130 TRAF3IP2O43734 574 aaPredicted RBP14.77□□□□□ -0.04
SDCBP-201ENST00000260130 IGHV1-2P23083 117 aa14.77□□□□□ -0.04
SDCBP-201ENST00000260130 IL32P24001 234 aa14.77□□□□□ -0.04
SDCBP-201ENST00000260130 ZP4Q12836 540 aa14.77□□□□□ -0.04
SDCBP-201ENST00000260130 TSC22D1Q15714 1073 aa14.77□□□□□ -0.04
SDCBP-201ENST00000260130 NHLRC1Q6VVB1 395 aa14.77□□□□□ -0.04
SDCBP-201ENST00000260130 C22orf34Q6ZV56 151 aa14.77□□□□□ -0.04
SDCBP-201ENST00000260130 POMGNT2Q8NAT1 580 aa14.77□□□□□ -0.04
SDCBP-201ENST00000260130 GGHQ92820 318 aa14.77□□□□□ -0.04
SDCBP-201ENST00000260130 HPS1Q92902 700 aa14.77□□□□□ -0.04
SDCBP-201ENST00000260130 BPIFA2Q96DR5 249 aa14.77□□□□□ -0.04
SDCBP-201ENST00000260130 PIP5K1AQ99755 562 aa14.77□□□□□ -0.04
SDCBP-201ENST00000260130 ENOPH1Q9UHY7 261 aa14.77□□□□□ -0.04
SDCBP-201ENST00000260130 RCE1Q9Y256 329 aa14.77□□□□□ -0.04
SDCBP-201ENST00000260130 FBN2P35556 2912 aa14.77□□□□□ -0.05
SDCBP-201ENST00000260130 A0A1W2PRQ8 180 aa14.77□□□□□ -0.05
SDCBP-201ENST00000260130 CYSRT1A8MQ03 144 aa14.77□□□□□ -0.05
SDCBP-201ENST00000260130 C11orf98E9PRG8 122 aa14.77□□□□□ -0.05
SDCBP-201ENST00000260130 PIP5K1CO60331 668 aa14.77□□□□□ -0.05
SDCBP-201ENST00000260130 LYZL6O75951 148 aa14.77□□□□□ -0.05
SDCBP-201ENST00000260130 IFI30P13284 250 aa14.77□□□□□ -0.05
SDCBP-201ENST00000260130 COX5AP20674 150 aa14.77□□□□□ -0.05
SDCBP-201ENST00000260130 GADD45AP24522 165 aa14.77□□□□□ -0.05
SDCBP-201ENST00000260130 C21orf33P30042 268 aaPredicted RBP14.77□□□□□ -0.05
SDCBP-201ENST00000260130 TGFBR1P36897 503 aa14.77□□□□□ -0.05
SDCBP-201ENST00000260130 SPIBQ01892 262 aa14.77□□□□□ -0.05
SDCBP-201ENST00000260130 POU3F1Q03052 451 aaPredicted RBP14.77□□□□□ -0.05
SDCBP-201ENST00000260130 MICAQ29983 383 aa14.77□□□□□ -0.05
SDCBP-201ENST00000260130 ZNF730Q6ZMV8 503 aa14.77□□□□□ -0.05
SDCBP-201ENST00000260130 MBOAT2Q6ZWT7 520 aa14.77□□□□□ -0.05
SDCBP-201ENST00000260130 RRM2BQ7LG56 351 aa14.77□□□□□ -0.05
SDCBP-201ENST00000260130 NRMQ8IXM6 262 aa14.77□□□□□ -0.05
SDCBP-201ENST00000260130 SLC7A13Q8TCU3 470 aa14.77□□□□□ -0.05
SDCBP-201ENST00000260130 ZNF556Q9HAH1 456 aa14.77□□□□□ -0.05
SDCBP-201ENST00000260130 MCCC2Q9HCC0 563 aa14.77□□□□□ -0.05
SDCBP-201ENST00000260130 ZNF226Q9NYT6 803 aa14.77□□□□□ -0.05
SDCBP-201ENST00000260130 CCDC59Q9P031 241 aaKnown RBP14.77□□□□□ -0.05
SDCBP-201ENST00000260130 OR6C65A6NJZ3 312 aa14.76□□□□□ -0.05
SDCBP-201ENST00000260130 A6NNC1 897 aa14.76□□□□□ -0.05
SDCBP-201ENST00000260130 BLOC1S5-TXNDC5H3BN57 136 aa14.76□□□□□ -0.05
SDCBP-201ENST00000260130 ZNF432O94892 652 aa14.76□□□□□ -0.05
SDCBP-201ENST00000260130 S100A5P33763 92 aa14.76□□□□□ -0.05
SDCBP-201ENST00000260130 GSSP48637 474 aa14.76□□□□□ -0.05
SDCBP-201ENST00000260130 ZNF45Q02386 682 aa14.76□□□□□ -0.05
SDCBP-201ENST00000260130 PRKCDQ05655 676 aa14.76□□□□□ -0.05
SDCBP-201ENST00000260130 CD300CQ08708 224 aa14.76□□□□□ -0.05
SDCBP-201ENST00000260130 BHLHA15Q7RTS1 189 aaPredicted RBP14.76□□□□□ -0.05
SDCBP-201ENST00000260130 NANOGNBQ7Z5D8 188 aa14.76□□□□□ -0.05
SDCBP-201ENST00000260130 LYSMD2Q8IV50 215 aa14.76□□□□□ -0.05
SDCBP-201ENST00000260130 STX19Q8N4C7 294 aa14.76□□□□□ -0.05
SDCBP-201ENST00000260130 ZNF433Q8N7K0 673 aaPredicted RBP14.76□□□□□ -0.05
SDCBP-201ENST00000260130 OR4C15Q8NGM1 316 aa14.76□□□□□ -0.05
SDCBP-201ENST00000260130 S100PBPQ96BU1 408 aa14.76□□□□□ -0.05
SDCBP-201ENST00000260130 ZC3HAV1LQ96H79 300 aaKnown RBP14.76□□□□□ -0.05
SDCBP-201ENST00000260130 USB1Q9BQ65 265 aaKnown RBP14.76□□□□□ -0.05
SDCBP-201ENST00000260130 NXF2Q9GZY0 626 aaKnown RBP14.76□□□□□ -0.05
SDCBP-201ENST00000260130 ABCB10Q9NRK6 738 aa14.76□□□□□ -0.05
SDCBP-201ENST00000260130 TAS2R16Q9NYV7 291 aa14.76□□□□□ -0.05
SDCBP-201ENST00000260130 FREM1Q5H8C1 2179 aa14.76□□□□□ -0.05
SDCBP-201ENST00000260130 RNF13O43567 381 aa14.75□□□□□ -0.05
SDCBP-201ENST00000260130 AKAP8O43823 692 aaKnown RBP14.75□□□□□ -0.05
SDCBP-201ENST00000260130 PODNL1Q6PEZ8 512 aa14.75□□□□□ -0.05
SDCBP-201ENST00000260130 CDK20Q8IZL9 346 aa14.75□□□□□ -0.05
SDCBP-201ENST00000260130 ANKK1Q8NFD2 765 aa14.75□□□□□ -0.05
SDCBP-201ENST00000260130 DHRS1Q96LJ7 313 aa14.75□□□□□ -0.05
SDCBP-201ENST00000260130 C6orf62Q9GZU0 229 aaPredicted RBP14.75□□□□□ -0.05
SDCBP-201ENST00000260130 IMPAD1Q9NX62 359 aa14.75□□□□□ -0.05
SDCBP-201ENST00000260130 ITPR2Q14571 2701 aa14.75□□□□□ -0.05
SDCBP-201ENST00000260130 FAM221AA4D161 298 aa14.75□□□□□ -0.05
SDCBP-201ENST00000260130 SERPINI2O75830 405 aa14.75□□□□□ -0.05
SDCBP-201ENST00000260130 KRT33AO76009 404 aa14.75□□□□□ -0.05
SDCBP-201ENST00000260130 FOXG1P55316 489 aaPredicted RBP14.75□□□□□ -0.05
SDCBP-201ENST00000260130 SMIM11AP58511 58 aa14.75□□□□□ -0.05
SDCBP-201ENST00000260130 TXNDC15Q96J42 360 aa14.75□□□□□ -0.05
SDCBP-201ENST00000260130 MED29Q9NX70 200 aa14.75□□□□□ -0.05
SDCBP-201ENST00000260130 CIB4A0PJX0 185 aa14.74□□□□□ -0.05
SDCBP-201ENST00000260130 SLC43A1O75387 559 aa14.74□□□□□ -0.05
SDCBP-201ENST00000260130 CTAG2O75638 210 aa14.74□□□□□ -0.05
SDCBP-201ENST00000260130 THBDP07204 575 aa14.74□□□□□ -0.05
SDCBP-201ENST00000260130 ITGA5P08648 1049 aa14.74□□□□□ -0.05
SDCBP-201ENST00000260130 DBTP11182 482 aaKnown RBP14.74□□□□□ -0.05
SDCBP-201ENST00000260130 MAKP20794 623 aa14.74□□□□□ -0.05
SDCBP-201ENST00000260130 KRR1Q13601 381 aaKnown RBP14.74□□□□□ -0.05
SDCBP-201ENST00000260130 ABHD12BQ7Z5M8 362 aaPredicted RBP14.74□□□□□ -0.05
SDCBP-201ENST00000260130 OR52J3Q8NH60 311 aa14.74□□□□□ -0.05
SDCBP-201ENST00000260130 HSD17B8Q92506 261 aa14.74□□□□□ -0.05
SDCBP-201ENST00000260130 OR2M2Q96R28 347 aa14.74□□□□□ -0.05
SDCBP-201ENST00000260130 EMC6Q9BV81 110 aa14.74□□□□□ -0.05
SDCBP-201ENST00000260130 LINC00470Q9BZP3 86 aa14.74□□□□□ -0.05
SDCBP-201ENST00000260130 POLE4Q9NR33 117 aa14.74□□□□□ -0.05
SDCBP-201ENST00000260130 SLC35F4A4IF30 521 aa14.74□□□□□ -0.05
SDCBP-201ENST00000260130 UPK3AO75631 287 aa14.74□□□□□ -0.05
SDCBP-201ENST00000260130 GADD45GO95257 159 aa14.74□□□□□ -0.05
SDCBP-201ENST00000260130 TSPAN19P0C672 248 aa14.74□□□□□ -0.05
SDCBP-201ENST00000260130 SAGP10523 405 aaPredicted RBP14.74□□□□□ -0.05
SDCBP-201ENST00000260130 IFNGR1P15260 489 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms