RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 TGM6O95932 706 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 SFTPBP07988 381 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 ITGA5P08648 1049 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 FAM157BP0CG42 384 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 CALCBP10092 127 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 SLC2A1P11166 492 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 ITGA3P26006 1051 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 AGTR1P30556 359 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 RPL35P42766 123 aaKnown RBP4.3□□□□□ -1.72
USP44-201ENST00000258499 EFNB2P52799 333 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 TAS2R19P59542 299 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 MC2RQ01718 297 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 TAGLNQ01995 201 aaKnown RBP4.3□□□□□ -1.72
USP44-201ENST00000258499 POU3F1Q03052 451 aaPredicted RBP4.3□□□□□ -1.72
USP44-201ENST00000258499 AIMP2Q13155 320 aaKnown RBP4.3□□□□□ -1.72
USP44-201ENST00000258499 ETFDHQ16134 617 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 ZNF74Q16587 644 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 VWA2Q5GFL6 755 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 WDR38Q5JTN6 314 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 C9orf50Q5SZB4 431 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 AWAT2Q6E213 333 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 C3orf33Q6P1S2 294 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 FAM180AQ6UWF9 173 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 NPSR1Q6W5P4 371 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 MDGA2Q7Z553 956 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 ZNF784Q8NCA9 323 aaPredicted RBP4.3□□□□□ -1.72
USP44-201ENST00000258499 OR2AJ1Q8NGZ0 328 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 GPR119Q8TDV5 335 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 DAZLQ92904 295 aaKnown RBP4.3□□□□□ -1.72
USP44-201ENST00000258499 CCDC74AQ96AQ1 378 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 RADILQ96JH8 1075 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 JSRP1Q96MG2 331 aaPredicted RBP4.3□□□□□ -1.72
USP44-201ENST00000258499 ZNF649Q9BS31 505 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 EMC6Q9BV81 110 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 TINAGL1Q9GZM7 467 aaPredicted RBP4.3□□□□□ -1.72
USP44-201ENST00000258499 PILRAQ9UKJ1 303 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 COA3Q9Y2R0 106 aaPredicted RBP4.3□□□□□ -1.72
USP44-201ENST00000258499 ETV7Q9Y603 341 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 TDRD6O60522 2096 aaKnown RBP4.3□□□□□ -1.72
USP44-201ENST00000258499 ANAPC1Q9H1A4 1944 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 PLXND1Q9Y4D7 1925 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 TP53BP1Q12888 1972 aaPredicted RBP4.3□□□□□ -1.72
USP44-201ENST00000258499 TCF20Q9UGU0 1960 aaKnown RBP4.3□□□□□ -1.72
USP44-201ENST00000258499 ASXL3Q9C0F0 2248 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 LOC100289279A0A1B0GTE1 492 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 MCRIP1C9JLW8 97 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 ZNF878C9JN71 531 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 H7C2Y5 167 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 K7EQS6 105 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 ARPC3O15145 178 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 OIP5O43482 229 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 SYT7O43581 403 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 SUSD5O60279 629 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 GLSO94925 669 aaPredicted RBP4.3□□□□□ -1.72
USP44-201ENST00000258499 HTR3BO95264 441 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 RRASP10301 218 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 M6PRP20645 277 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 CD1CP29017 333 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 TNFRSF4P43489 277 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 TLE3Q04726 772 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 EIF2B5Q13144 721 aaKnown RBP4.3□□□□□ -1.72
USP44-201ENST00000258499 HLXQ14774 488 aaPredicted RBP4.3□□□□□ -1.72
USP44-201ENST00000258499 UBXN2BQ14CS0 331 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 FAM199XQ6PEV8 388 aaPredicted RBP4.3□□□□□ -1.72
USP44-201ENST00000258499 HAGHLQ6PII5 290 aaPredicted RBP4.3□□□□□ -1.72
USP44-201ENST00000258499 DNM1P34Q6PK57 102 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 PEG10Q86TG7 708 aaKnown RBP4.3□□□□□ -1.72
USP44-201ENST00000258499 GABRG1Q8N1C3 465 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 SCARB1Q8WTV0 552 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.3□□□□□ -1.72
USP44-201ENST00000258499 SLC41A2Q96JW4 573 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 SELENOIQ9C0D9 397 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 CHST6Q9GZX3 395 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 MMP25Q9NPA2 562 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 RABL2AQ9UBK7 228 aaPredicted RBP4.3□□□□□ -1.72
USP44-201ENST00000258499 SCML1Q9UN30 329 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 RABL2BQ9UNT1 228 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 B9D1Q9UPM9 204 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 NOTCH4Q99466 2003 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 LINC00862A6NCI5 91 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 XRCC3O43542 346 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 FADS1O60427 444 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 FARS2O95363 451 aaKnown RBP4.3□□□□□ -1.72
USP44-201ENST00000258499 SCGB1D2O95969 90 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 PRKACAP17612 351 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 CXCL2P19875 107 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 KIR2DL1P43626 348 aaPredicted RBP4.3□□□□□ -1.72
USP44-201ENST00000258499 RAG2P55895 527 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 ZP1P60852 638 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 ELOCQ15369 112 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 TUSC1Q2TAM9 212 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 PRSS42Q7Z5A4 293 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 TMEM17Q86X19 198 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 GTPBP8Q8N3Z3 284 aaPredicted RBP4.3□□□□□ -1.72
USP44-201ENST00000258499 ZNF321PQ8N8H1 164 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 ZNF615Q8N8J6 731 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 OR5D18Q8NGL1 313 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 PHOSPHO2Q8TCD6 241 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 PAQR8Q8TEZ7 354 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 NUDCD2Q8WVJ2 157 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms