RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 USF2Q15853 346 aaPredicted RBP17.34■□□□□ 0.37
PTPRE-201ENST00000254667 PDLIM3Q53GG5 364 aaPredicted RBP17.34■□□□□ 0.37
PTPRE-201ENST00000254667 ETFBKMTQ8IXQ9 262 aa17.34■□□□□ 0.37
PTPRE-201ENST00000254667 TEX19Q8NA77 164 aa17.34■□□□□ 0.37
PTPRE-201ENST00000254667 SARAFQ96BY9 339 aa17.34■□□□□ 0.37
PTPRE-201ENST00000254667 BOD1Q96IK1 185 aa17.34■□□□□ 0.37
PTPRE-201ENST00000254667 URB1O60287 2271 aaKnown RBP17.34■□□□□ 0.37
PTPRE-201ENST00000254667 SUMO3P55854 103 aaPredicted RBP17.34■□□□□ 0.37
PTPRE-201ENST00000254667 CDCA4Q9BXL8 241 aa17.34■□□□□ 0.37
PTPRE-201ENST00000254667 C12orf49Q9H741 205 aa17.34■□□□□ 0.37
PTPRE-201ENST00000254667 SPACA1Q9HBV2 294 aa17.34■□□□□ 0.37
PTPRE-201ENST00000254667 ANKRD33BA6NCL7 494 aa17.34■□□□□ 0.37
PTPRE-201ENST00000254667 ACKR1Q16570 336 aa17.34■□□□□ 0.37
PTPRE-201ENST00000254667 YRDCQ86U90 279 aaKnown RBP17.34■□□□□ 0.37
PTPRE-201ENST00000254667 LACC1Q8IV20 430 aa17.34■□□□□ 0.37
PTPRE-201ENST00000254667 OR4D6Q8NGJ1 314 aa17.34■□□□□ 0.37
PTPRE-201ENST00000254667 SECTM1Q8WVN6 248 aa17.34■□□□□ 0.37
PTPRE-201ENST00000254667 TTC9Q92623 222 aa17.34■□□□□ 0.37
PTPRE-201ENST00000254667 EVPLQ92817 2033 aa17.34■□□□□ 0.37
PTPRE-201ENST00000254667 ZNF419Q96HQ0 510 aaPredicted RBP17.34■□□□□ 0.37
PTPRE-201ENST00000254667 CCDC74BQ96LY2 380 aa17.34■□□□□ 0.37
PTPRE-201ENST00000254667 SMIM3Q9BZL3 60 aa17.34■□□□□ 0.37
PTPRE-201ENST00000254667 ISYNA1Q9NPH2 558 aa17.34■□□□□ 0.37
PTPRE-201ENST00000254667 GON4LQ3T8J9 2241 aa17.34■□□□□ 0.37
PTPRE-201ENST00000254667 ICOSLGO75144 302 aa17.34■□□□□ 0.37
PTPRE-201ENST00000254667 SPI1P17947 270 aa17.34■□□□□ 0.37
PTPRE-201ENST00000254667 APEX1P27695 318 aaKnown RBP17.34■□□□□ 0.37
PTPRE-201ENST00000254667 PRTGQ2VWP7 1150 aa17.34■□□□□ 0.37
PTPRE-201ENST00000254667 LIPNQ5VXI9 398 aa17.34■□□□□ 0.37
PTPRE-201ENST00000254667 NUDT8Q8WV74 236 aa17.34■□□□□ 0.37
PTPRE-201ENST00000254667 BARHL1Q9BZE3 327 aa17.34■□□□□ 0.37
PTPRE-201ENST00000254667 WSB2Q9NYS7 404 aaPredicted RBP17.34■□□□□ 0.37
PTPRE-201ENST00000254667 SPINT2O43291 252 aa17.34■□□□□ 0.37
PTPRE-201ENST00000254667 ZGLP1P0C6A0 271 aa17.34■□□□□ 0.37
PTPRE-201ENST00000254667 SNCAP37840 140 aa17.34■□□□□ 0.37
PTPRE-201ENST00000254667 GPR85P60893 370 aa17.34■□□□□ 0.37
PTPRE-201ENST00000254667 SORDQ00796 357 aa17.34■□□□□ 0.37
PTPRE-201ENST00000254667 B4GALNT1Q00973 533 aa17.34■□□□□ 0.37
PTPRE-201ENST00000254667 RUNX2Q13950 521 aa17.34■□□□□ 0.37
PTPRE-201ENST00000254667 PIGTQ969N2 578 aa17.34■□□□□ 0.37
PTPRE-201ENST00000254667 SDSLQ96GA7 329 aa17.34■□□□□ 0.37
PTPRE-201ENST00000254667 KCNJ15Q99712 375 aa17.34■□□□□ 0.37
PTPRE-201ENST00000254667 RTL8AQ9BWD3 113 aa17.34■□□□□ 0.37
PTPRE-201ENST00000254667 BCO1Q9HAY6 547 aa17.34■□□□□ 0.37
PTPRE-201ENST00000254667 NECAP2Q9NVZ3 263 aa17.34■□□□□ 0.37
PTPRE-201ENST00000254667 B3GALT5Q9Y2C3 310 aa17.34■□□□□ 0.37
PTPRE-201ENST00000254667 SBK3P0C264 359 aa17.33■□□□□ 0.37
PTPRE-201ENST00000254667 KITLGP21583 273 aa17.33■□□□□ 0.37
PTPRE-201ENST00000254667 SYS1Q8N2H4 156 aa17.33■□□□□ 0.37
PTPRE-201ENST00000254667 FBXL6Q8N531 539 aa17.33■□□□□ 0.37
PTPRE-201ENST00000254667 DCLRE1CQ96SD1 692 aaKnown RBP17.33■□□□□ 0.37
PTPRE-201ENST00000254667 EGLN1Q9GZT9 426 aa17.33■□□□□ 0.37
PTPRE-201ENST00000254667 METTL17Q9H7H0 456 aaPredicted RBP17.33■□□□□ 0.37
PTPRE-201ENST00000254667 COQ3Q9NZJ6 369 aa17.33■□□□□ 0.37
PTPRE-201ENST00000254667 TIMM8BQ9Y5J9 83 aaPredicted RBP17.33■□□□□ 0.37
PTPRE-201ENST00000254667 KIAA0100Q14667 2235 aaKnown RBP17.33■□□□□ 0.37
PTPRE-201ENST00000254667 C1orf196B1AJZ1 125 aa17.33■□□□□ 0.36
PTPRE-201ENST00000254667 NRG2O14511 850 aaPredicted RBP17.33■□□□□ 0.36
PTPRE-201ENST00000254667 FCMRO60667 390 aa17.33■□□□□ 0.36
PTPRE-201ENST00000254667 PMPCAQ10713 525 aa17.33■□□□□ 0.36
PTPRE-201ENST00000254667 SLC10A1Q14973 349 aa17.33■□□□□ 0.36
PTPRE-201ENST00000254667 SFRP5Q5T4F7 317 aa17.33■□□□□ 0.36
PTPRE-201ENST00000254667 ANGPTL5Q86XS5 388 aa17.33■□□□□ 0.36
PTPRE-201ENST00000254667 KIRREL1Q96J84 757 aa17.33■□□□□ 0.36
PTPRE-201ENST00000254667 MBOAT4Q96T53 435 aa17.33■□□□□ 0.36
PTPRE-201ENST00000254667 KCNG2Q9UJ96 466 aa17.33■□□□□ 0.36
PTPRE-201ENST00000254667 C17orf112F2Z3M2 114 aa17.33■□□□□ 0.36
PTPRE-201ENST00000254667 GFERP55789 205 aa17.33■□□□□ 0.36
PTPRE-201ENST00000254667 C11orf40Q8WZ69 217 aa17.33■□□□□ 0.36
PTPRE-201ENST00000254667 GALNT9Q9HCQ5 603 aa17.33■□□□□ 0.36
PTPRE-201ENST00000254667 NTNG1Q9Y2I2 539 aa17.33■□□□□ 0.36
PTPRE-201ENST00000254667 PRELID3BQ9Y3B1 194 aa17.33■□□□□ 0.36
PTPRE-201ENST00000254667 PRRG2O14669 202 aa17.33■□□□□ 0.36
PTPRE-201ENST00000254667 ETHE1O95571 254 aa17.33■□□□□ 0.36
PTPRE-201ENST00000254667 QDPRP09417 244 aa17.33■□□□□ 0.36
PTPRE-201ENST00000254667 CCR9P51686 369 aa17.33■□□□□ 0.36
PTPRE-201ENST00000254667 HBG1P69891 147 aa17.33■□□□□ 0.36
PTPRE-201ENST00000254667 HBG2P69892 147 aa17.33■□□□□ 0.36
PTPRE-201ENST00000254667 PLA2G7Q13093 441 aa17.33■□□□□ 0.36
PTPRE-201ENST00000254667 FAM71CQ8NEG0 241 aa17.33■□□□□ 0.36
PTPRE-201ENST00000254667 OXGR1Q96P68 337 aa17.33■□□□□ 0.36
PTPRE-201ENST00000254667 HINT3Q9NQE9 182 aaKnown RBP17.33■□□□□ 0.36
PTPRE-201ENST00000254667 ZNF346Q9UL40 294 aaKnown RBP17.33■□□□□ 0.36
PTPRE-201ENST00000254667 A0A0A6YYD5 115 aa17.32■□□□□ 0.36
PTPRE-201ENST00000254667 TCRBP04435 133 aa17.32■□□□□ 0.36
PTPRE-201ENST00000254667 HIST1H1CP16403 213 aaKnown RBP17.32■□□□□ 0.36
PTPRE-201ENST00000254667 ARR3P36575 388 aa17.32■□□□□ 0.36
PTPRE-201ENST00000254667 ESCO2Q56NI9 601 aa17.32■□□□□ 0.36
PTPRE-201ENST00000254667 PRSS35Q8N3Z0 413 aa17.32■□□□□ 0.36
PTPRE-201ENST00000254667 PLPP7Q8NBV4 271 aa17.32■□□□□ 0.36
PTPRE-201ENST00000254667 PFDN5Q99471 154 aa17.32■□□□□ 0.36
PTPRE-201ENST00000254667 TCRBV5S2A0A599 114 aa17.32■□□□□ 0.36
PTPRE-201ENST00000254667 OR8B8Q15620 311 aa17.32■□□□□ 0.36
PTPRE-201ENST00000254667 SIAH3Q8IW03 269 aa17.32■□□□□ 0.36
PTPRE-201ENST00000254667 KDM8Q8N371 416 aa17.32■□□□□ 0.36
PTPRE-201ENST00000254667 SUMF2Q8NBJ7 301 aa17.32■□□□□ 0.36
PTPRE-201ENST00000254667 LRRC61Q9BV99 259 aa17.32■□□□□ 0.36
PTPRE-201ENST00000254667 DOCK1Q14185 1865 aa17.32■□□□□ 0.36
PTPRE-201ENST00000254667 PPP3CBP16298 524 aa17.32■□□□□ 0.36
PTPRE-201ENST00000254667 STEAP3Q658P3 488 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms