RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 FAM172BPA6NC97 362 aa16.79■□□□□ 0.28
PDLIM4-201ENST00000253754 ANKUB1A6NFN9 424 aa16.79■□□□□ 0.28
PDLIM4-201ENST00000253754 TRIM3O75382 744 aaPredicted RBP16.79■□□□□ 0.28
PDLIM4-201ENST00000253754 MAPK3P27361 379 aaPredicted RBP16.79■□□□□ 0.28
PDLIM4-201ENST00000253754 BTG1P62324 171 aa16.79■□□□□ 0.28
PDLIM4-201ENST00000253754 MFGE8Q08431 387 aaPredicted RBP16.79■□□□□ 0.28
PDLIM4-201ENST00000253754 CCDC157Q569K6 752 aa16.79■□□□□ 0.28
PDLIM4-201ENST00000253754 HACD4Q5VWC8 232 aa16.79■□□□□ 0.28
PDLIM4-201ENST00000253754 OR7E24Q6IFN5 339 aa16.79■□□□□ 0.28
PDLIM4-201ENST00000253754 OR52I2Q8NH67 350 aa16.79■□□□□ 0.28
PDLIM4-201ENST00000253754 DCBLD2Q96PD2 775 aa16.79■□□□□ 0.28
PDLIM4-201ENST00000253754 MNTQ99583 582 aa16.79■□□□□ 0.28
PDLIM4-201ENST00000253754 CACNG6Q9BXT2 260 aa16.79■□□□□ 0.28
PDLIM4-201ENST00000253754 SLITRK2Q9H156 845 aa16.79■□□□□ 0.28
PDLIM4-201ENST00000253754 COA3Q9Y2R0 106 aaPredicted RBP16.79■□□□□ 0.28
PDLIM4-201ENST00000253754 OTOGLQ3ZCN5 2332 aa16.79■□□□□ 0.28
PDLIM4-201ENST00000253754 CPAMD8Q8IZJ3 1885 aa16.79■□□□□ 0.28
PDLIM4-201ENST00000253754 TRBV5-7A0A0A0MS05 114 aa16.79■□□□□ 0.28
PDLIM4-201ENST00000253754 TMEM212A6NML5 194 aa16.79■□□□□ 0.28
PDLIM4-201ENST00000253754 MS4A18H0YCH9 400 aa16.79■□□□□ 0.28
PDLIM4-201ENST00000253754 H3BML4 177 aa16.79■□□□□ 0.28
PDLIM4-201ENST00000253754 GSTZ1O43708 216 aaPredicted RBP16.79■□□□□ 0.28
PDLIM4-201ENST00000253754 ACP1P24666 158 aa16.79■□□□□ 0.28
PDLIM4-201ENST00000253754 ZFP36L1Q07352 338 aaKnown RBP16.79■□□□□ 0.28
PDLIM4-201ENST00000253754 SLC17A1Q14916 467 aa16.79■□□□□ 0.28
PDLIM4-201ENST00000253754 FCN2Q15485 313 aa16.79■□□□□ 0.28
PDLIM4-201ENST00000253754 MS4A18Q3C1V0 323 aa16.79■□□□□ 0.28
PDLIM4-201ENST00000253754 TMEM255AQ5JRV8 349 aa16.79■□□□□ 0.28
PDLIM4-201ENST00000253754 ZNF385CQ66K41 422 aaPredicted RBP16.79■□□□□ 0.28
PDLIM4-201ENST00000253754 ASCC1Q8N9N2 400 aaKnown RBP16.79■□□□□ 0.28
PDLIM4-201ENST00000253754 GPR148Q8TDV2 347 aa16.79■□□□□ 0.28
PDLIM4-201ENST00000253754 NXPE2Q96DL1 559 aa16.79■□□□□ 0.28
PDLIM4-201ENST00000253754 MRPL39Q9NYK5 338 aaKnown RBP16.79■□□□□ 0.28
PDLIM4-201ENST00000253754 RCE1Q9Y256 329 aa16.79■□□□□ 0.28
PDLIM4-201ENST00000253754 ANXA2P2A6NMY6 339 aa16.78■□□□□ 0.28
PDLIM4-201ENST00000253754 CDX4O14627 284 aaPredicted RBP16.78■□□□□ 0.28
PDLIM4-201ENST00000253754 ANXA2P07355 339 aaKnown RBP16.78■□□□□ 0.28
PDLIM4-201ENST00000253754 PUDPQ08623 228 aa16.78■□□□□ 0.28
PDLIM4-201ENST00000253754 C17orf67Q0P5P2 114 aa16.78■□□□□ 0.28
PDLIM4-201ENST00000253754 INPP5JQ15735 1006 aaPredicted RBP16.78■□□□□ 0.28
PDLIM4-201ENST00000253754 BAIAP2L2Q6UXY1 529 aa16.78■□□□□ 0.28
PDLIM4-201ENST00000253754 MISPQ8IVT2 679 aa16.78■□□□□ 0.28
PDLIM4-201ENST00000253754 DND1Q8IYX4 353 aaKnown RBP16.78■□□□□ 0.28
PDLIM4-201ENST00000253754 AGBL5Q8NDL9 886 aa16.78■□□□□ 0.28
PDLIM4-201ENST00000253754 NUBPLQ8TB37 319 aa16.78■□□□□ 0.28
PDLIM4-201ENST00000253754 TMEM234Q8WY98 164 aa16.78■□□□□ 0.28
PDLIM4-201ENST00000253754 SPSB2Q99619 263 aa16.78■□□□□ 0.28
PDLIM4-201ENST00000253754 ING3Q9NXR8 418 aa16.78■□□□□ 0.28
PDLIM4-201ENST00000253754 KLRF1Q9NZS2 232 aa16.78■□□□□ 0.28
PDLIM4-201ENST00000253754 KLK11Q9UBX7 282 aa16.78■□□□□ 0.28
PDLIM4-201ENST00000253754 FOXJ3Q9UPW0 622 aa16.78■□□□□ 0.28
PDLIM4-201ENST00000253754 PHYHO14832 338 aa16.77■□□□□ 0.28
PDLIM4-201ENST00000253754 CTDSPLO15194 276 aa16.77■□□□□ 0.28
PDLIM4-201ENST00000253754 OR2T1O43869 369 aa16.77■□□□□ 0.28
PDLIM4-201ENST00000253754 DOK2O60496 412 aa16.77■□□□□ 0.28
PDLIM4-201ENST00000253754 OPN1LWP04000 364 aa16.77■□□□□ 0.28
PDLIM4-201ENST00000253754 GP1BAP07359 652 aa16.77■□□□□ 0.28
PDLIM4-201ENST00000253754 CCL4P13236 92 aa16.77■□□□□ 0.28
PDLIM4-201ENST00000253754 IFNGR1P15260 489 aa16.77■□□□□ 0.28
PDLIM4-201ENST00000253754 CDK2P24941 298 aa16.77■□□□□ 0.28
PDLIM4-201ENST00000253754 PTH2RP49190 550 aa16.77■□□□□ 0.28
PDLIM4-201ENST00000253754 C19orf57Q0VDD7 668 aa16.77■□□□□ 0.28
PDLIM4-201ENST00000253754 SNTB2Q13425 540 aaKnown RBP16.77■□□□□ 0.28
PDLIM4-201ENST00000253754 EIF2B1Q14232 305 aaKnown RBP16.77■□□□□ 0.28
PDLIM4-201ENST00000253754 FAM205BPQ63HN1 556 aa16.77■□□□□ 0.28
PDLIM4-201ENST00000253754 SLC18B1Q6NT16 456 aa16.77■□□□□ 0.28
PDLIM4-201ENST00000253754 GLB1L2Q8IW92 636 aa16.77■□□□□ 0.28
PDLIM4-201ENST00000253754 TSEN15Q8WW01 171 aaKnown RBP16.77■□□□□ 0.28
PDLIM4-201ENST00000253754 CRB3Q9BUF7 120 aa16.77■□□□□ 0.28
PDLIM4-201ENST00000253754 BEX1Q9HBH7 125 aa16.77■□□□□ 0.28
PDLIM4-201ENST00000253754 MED29Q9NX70 200 aa16.77■□□□□ 0.28
PDLIM4-201ENST00000253754 IGKV1D-43A0A0B4J1Z2 117 aa16.77■□□□□ 0.27
PDLIM4-201ENST00000253754 GMDSO60547 372 aa16.77■□□□□ 0.27
PDLIM4-201ENST00000253754 OR2J2O76002 312 aa16.77■□□□□ 0.27
PDLIM4-201ENST00000253754 IGHMP01871 453 aa16.77■□□□□ 0.27
PDLIM4-201ENST00000253754 FBXO45P0C2W1 286 aa16.77■□□□□ 0.27
PDLIM4-201ENST00000253754 CCKBRP32239 447 aa16.77■□□□□ 0.27
PDLIM4-201ENST00000253754 RASGEF1BQ0VAM2 473 aa16.77■□□□□ 0.27
PDLIM4-201ENST00000253754 TCF15Q12870 199 aa16.77■□□□□ 0.27
PDLIM4-201ENST00000253754 FAPQ12884 760 aa16.77■□□□□ 0.27
PDLIM4-201ENST00000253754 TRA2AQ13595 282 aaKnown RBP eCLIP16.77■□□□□ 0.27
PDLIM4-201ENST00000253754 TMEM69Q5SWH9 247 aa16.77■□□□□ 0.27
PDLIM4-201ENST00000253754 TIGD3Q6B0B8 471 aa16.77■□□□□ 0.27
PDLIM4-201ENST00000253754 CPEB2Q7Z5Q1 589 aaKnown RBP16.77■□□□□ 0.27
PDLIM4-201ENST00000253754 ZNF679Q8IYX0 411 aa16.77■□□□□ 0.27
PDLIM4-201ENST00000253754 OR10G3Q8NGC4 313 aa16.77■□□□□ 0.27
PDLIM4-201ENST00000253754 SCMH1Q96GD3 660 aa16.77■□□□□ 0.27
PDLIM4-201ENST00000253754 MS4A3Q96HJ5 214 aa16.77■□□□□ 0.27
PDLIM4-201ENST00000253754 CMTM3Q96MX0 182 aa16.77■□□□□ 0.27
PDLIM4-201ENST00000253754 ABHD6Q9BV23 337 aa16.77■□□□□ 0.27
PDLIM4-201ENST00000253754 GHITMQ9H3K2 345 aa16.77■□□□□ 0.27
PDLIM4-201ENST00000253754 KCNK15Q9H427 330 aa16.77■□□□□ 0.27
PDLIM4-201ENST00000253754 NUBP2Q9Y5Y2 271 aa16.77■□□□□ 0.27
PDLIM4-201ENST00000253754 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.76■□□□□ 0.27
PDLIM4-201ENST00000253754 GZMKP49863 264 aa16.76■□□□□ 0.27
PDLIM4-201ENST00000253754 IL11RAQ14626 422 aa16.76■□□□□ 0.27
PDLIM4-201ENST00000253754 SFRP4Q6FHJ7 346 aaPredicted RBP16.76■□□□□ 0.27
PDLIM4-201ENST00000253754 PRSS33Q8NF86 280 aa16.76■□□□□ 0.27
PDLIM4-201ENST00000253754 BEST4Q8NFU0 473 aa16.76■□□□□ 0.27
PDLIM4-201ENST00000253754 ST8SIA1Q92185 356 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms