RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 S100PP25815 95 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 PBX2P40425 430 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 RAB13P51153 203 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 BLKP51451 505 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 CTXN1P60606 82 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 HTRA3P83110 453 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 RPE65Q16518 533 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 SLC36A2Q495M3 483 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 LYPD6Q86Y78 171 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 DND1Q8IYX4 353 aaKnown RBP3.77□□□□□ -1.81
UBE4A-201ENST00000252108 OR52E1Q8NGJ3 308 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 C16orf58Q96GQ5 468 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 CLEC1BQ9P126 229 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 OPN4Q9UHM6 478 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 PURGQ9UJV8 347 aaKnown RBP3.77□□□□□ -1.81
UBE4A-201ENST00000252108 KCNIP3Q9Y2W7 256 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 A8MXK9 166 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 E9PI62 339 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 SLC17A2O00624 439 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 HOXD4P09016 255 aaPredicted RBP3.77□□□□□ -1.81
UBE4A-201ENST00000252108 SMIM6P0DI80 62 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 COL9A1P20849 921 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 VAMP1P23763 118 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 GJA4P35212 333 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 LSSP48449 732 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 TAS2R46P59540 309 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 RPS11P62280 158 aaKnown RBP eCLIP3.77□□□□□ -1.81
UBE4A-201ENST00000252108 UBE2IP63279 158 aaKnown RBP3.77□□□□□ -1.81
UBE4A-201ENST00000252108 Q5BKY6 102 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 FIGLAQ6QHK4 219 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 GRASPQ7Z6J2 395 aaPredicted RBP3.77□□□□□ -1.81
UBE4A-201ENST00000252108 ZNF595Q8IYB9 648 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 SDR9C7Q8NEX9 313 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 NEK7Q8TDX7 302 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 SMARCD2Q92925 531 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 PGLYRP3Q96LB9 341 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 WDR92Q96MX6 357 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 HCAR1Q9BXC0 346 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 SHARPINQ9H0F6 387 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 FAM86C1Q9NVL1 165 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 GDE1Q9NZC3 331 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 C5AR2Q9P296 337 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 ATG4BQ9Y4P1 393 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 CDC42EP2O14613 210 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 DVL2O14641 736 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 FRS3O43559 492 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 AGFG2O95081 481 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 ZNF14P17017 642 aaPredicted RBP3.77□□□□□ -1.81
UBE4A-201ENST00000252108 VIPR2P41587 438 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 SOX2P48431 317 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 PGDP52209 483 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 MAP2K6P52564 334 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 CD81P60033 236 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 IL13RA1P78552 427 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 C9orf50Q5SZB4 431 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 LYPD8Q6UX82 237 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 TFAP2EQ6VUC0 442 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 STAC2Q6ZMT1 411 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 GLCCI1Q86VQ1 547 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 GABRG1Q8N1C3 465 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 JAGN1Q8N5M9 183 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 LIPHQ8WWY8 451 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 FAM3DQ96BQ1 224 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 DERL3Q96Q80 235 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 NMNAT2Q9BZQ4 307 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 METTL8Q9H825 291 aaKnown RBP3.77□□□□□ -1.81
UBE4A-201ENST00000252108 ISG20L2Q9H9L3 353 aaKnown RBP3.77□□□□□ -1.81
UBE4A-201ENST00000252108 MMP26Q9NRE1 261 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 SPHK1Q9NYA1 384 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 DNAJB11Q9UBS4 358 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 ING1Q9UK53 422 aaPredicted RBP3.77□□□□□ -1.81
UBE4A-201ENST00000252108 YBX2Q9Y2T7 364 aaKnown RBP3.77□□□□□ -1.81
UBE4A-201ENST00000252108 A0A0B4J2A0 478 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 A0A0B4J2E0 115 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 A0A1B0GX12 115 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 RPS10-NUDT3A0A1W2PQS6 291 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 PQLC2LA1A4F0 135 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 TMEM218A2RU14 115 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 BLOC1S5-TXNDC5H3BN57 136 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 HSPA12AO43301 675 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 MELTFP08582 738 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 NMBP08949 121 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 GIMD1P0DJR0 217 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 HNF1AP20823 631 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 ITGA3P26006 1051 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 HTR2CP28335 458 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 IL12BP29460 328 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 FNTBP49356 437 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 RPS4XP62701 263 aaKnown RBP3.77□□□□□ -1.81
UBE4A-201ENST00000252108 GPR18Q14330 331 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 PPA1Q15181 289 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 SLC25A35Q3KQZ1 300 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 LINC00303Q3SY05 128 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 C11orf87Q6NUJ2 197 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 FAM111BQ6SJ93 734 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 GALNT16Q8N428 558 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 FRMD1Q8N878 549 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 KDF1Q8NAX2 398 aaPredicted RBP3.77□□□□□ -1.81
UBE4A-201ENST00000252108 TMEM52Q8NDY8 209 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 FAM174AQ8TBP5 190 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms