RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 OR8B4Q96RC9 309 aa23.02■■□□□ 1.28
RAB40C-201ENST00000248139 CHST6Q9GZX3 395 aa23.02■■□□□ 1.28
RAB40C-201ENST00000248139 CGGBP1Q9UFW8 167 aaPredicted RBP23.02■■□□□ 1.28
RAB40C-201ENST00000248139 GGT3PA6NGU5 568 aa23.01■■□□□ 1.27
RAB40C-201ENST00000248139 H3BMH7 237 aa23.01■■□□□ 1.27
RAB40C-201ENST00000248139 CREBL2O60519 120 aaPredicted RBP23.01■■□□□ 1.27
RAB40C-201ENST00000248139 GP1BBP13224 206 aa23.01■■□□□ 1.27
RAB40C-201ENST00000248139 SFRP5Q5T4F7 317 aa23.01■■□□□ 1.27
RAB40C-201ENST00000248139 FAM198BQ6UWH4 519 aa23.01■■□□□ 1.27
RAB40C-201ENST00000248139 COMMD7Q86VX2 200 aa23.01■■□□□ 1.27
RAB40C-201ENST00000248139 CCNL2Q96S94 520 aaPredicted RBP23.01■■□□□ 1.27
RAB40C-201ENST00000248139 LDHAL6BQ9BYZ2 381 aaPredicted RBP23.01■■□□□ 1.27
RAB40C-201ENST00000248139 ETV7Q9Y603 341 aa23.01■■□□□ 1.27
RAB40C-201ENST00000248139 TMED7-TICAM2A0A0A6YYA0 188 aa23.01■■□□□ 1.27
RAB40C-201ENST00000248139 LINC00862A6NCI5 91 aa23.01■■□□□ 1.27
RAB40C-201ENST00000248139 PRAF2O60831 178 aa23.01■■□□□ 1.27
RAB40C-201ENST00000248139 POU3F2P20265 443 aaPredicted RBP23.01■■□□□ 1.27
RAB40C-201ENST00000248139 OR10K2Q6IF99 312 aa23.01■■□□□ 1.27
RAB40C-201ENST00000248139 ADGRG3Q86Y34 549 aa23.01■■□□□ 1.27
RAB40C-201ENST00000248139 OR51S1Q8NGJ8 323 aa23.01■■□□□ 1.27
RAB40C-201ENST00000248139 ZNF587Q96SQ5 575 aaPredicted RBP23.01■■□□□ 1.27
RAB40C-201ENST00000248139 WWTR1Q9GZV5 400 aa23.01■■□□□ 1.27
RAB40C-201ENST00000248139 DUSP15Q9H1R2 295 aaPredicted RBP23.01■■□□□ 1.27
RAB40C-201ENST00000248139 LMAN1LQ9HAT1 526 aa23.01■■□□□ 1.27
RAB40C-201ENST00000248139 PTTG3PQ9NZH4 202 aa23.01■■□□□ 1.27
RAB40C-201ENST00000248139 CA14Q9ULX7 337 aa23.01■■□□□ 1.27
RAB40C-201ENST00000248139 TMED7Q9Y3B3 224 aa23.01■■□□□ 1.27
RAB40C-201ENST00000248139 A0A1W2PR77 199 aa23■■□□□ 1.27
RAB40C-201ENST00000248139 TSPAN2O60636 221 aa23■■□□□ 1.27
RAB40C-201ENST00000248139 GTF2F2P13984 249 aa23■■□□□ 1.27
RAB40C-201ENST00000248139 IFNGR1P15260 489 aa23■■□□□ 1.27
RAB40C-201ENST00000248139 CSNK1EP49674 416 aaKnown RBP23■■□□□ 1.27
RAB40C-201ENST00000248139 OR51A2Q8NGJ7 313 aa23■■□□□ 1.27
RAB40C-201ENST00000248139 UBQLN2Q9UHD9 624 aa23■■□□□ 1.27
RAB40C-201ENST00000248139 CDV3Q9UKY7 258 aaKnown RBP23■■□□□ 1.27
RAB40C-201ENST00000248139 COA3Q9Y2R0 106 aaPredicted RBP23■■□□□ 1.27
RAB40C-201ENST00000248139 TMEM14AQ9Y6G1 99 aa23■■□□□ 1.27
RAB40C-201ENST00000248139 CNTRLQ7Z7A1 2325 aa23■■□□□ 1.27
RAB40C-201ENST00000248139 SMAD9O15198 467 aaKnown RBP23■■□□□ 1.27
RAB40C-201ENST00000248139 LMX1BO60663 402 aa23■■□□□ 1.27
RAB40C-201ENST00000248139 CD3DP04234 171 aa23■■□□□ 1.27
RAB40C-201ENST00000248139 GALNSP34059 522 aa23■■□□□ 1.27
RAB40C-201ENST00000248139 RPL27P61353 136 aaKnown RBP23■■□□□ 1.27
RAB40C-201ENST00000248139 FMODQ06828 376 aa23■■□□□ 1.27
RAB40C-201ENST00000248139 MAMDC2Q7Z304 686 aaPredicted RBP23■■□□□ 1.27
RAB40C-201ENST00000248139 KRT77Q7Z794 578 aa23■■□□□ 1.27
RAB40C-201ENST00000248139 FAM3DQ96BQ1 224 aa23■■□□□ 1.27
RAB40C-201ENST00000248139 ATG5Q9H1Y0 275 aa23■■□□□ 1.27
RAB40C-201ENST00000248139 H7C417 338 aa22.99■■□□□ 1.27
RAB40C-201ENST00000248139 IGF2P01344 180 aa22.99■■□□□ 1.27
RAB40C-201ENST00000248139 RASGEF1BQ0VAM2 473 aa22.99■■□□□ 1.27
RAB40C-201ENST00000248139 OPCMLQ14982 345 aa22.99■■□□□ 1.27
RAB40C-201ENST00000248139 ELAVL1Q15717 326 aaKnown RBP22.99■■□□□ 1.27
RAB40C-201ENST00000248139 ARHGAP40Q5TG30 622 aa22.99■■□□□ 1.27
RAB40C-201ENST00000248139 ZNF626Q68DY1 528 aa22.99■■□□□ 1.27
RAB40C-201ENST00000248139 LINC00346Q8IVM7 164 aa22.99■■□□□ 1.27
RAB40C-201ENST00000248139 SUN5Q8TC36 379 aa22.99■■□□□ 1.27
RAB40C-201ENST00000248139 ZDHHC12Q96GR4 267 aa22.99■■□□□ 1.27
RAB40C-201ENST00000248139 DPYSL5Q9BPU6 564 aa22.99■■□□□ 1.27
RAB40C-201ENST00000248139 CTSFQ9UBX1 484 aa22.99■■□□□ 1.27
RAB40C-201ENST00000248139 MTFP1Q9UDX5 166 aa22.99■■□□□ 1.27
RAB40C-201ENST00000248139 DCDC2BA2VCK2 349 aa22.99■■□□□ 1.27
RAB40C-201ENST00000248139 SOX1O00570 391 aaPredicted RBP22.99■■□□□ 1.27
RAB40C-201ENST00000248139 EIF2B1Q14232 305 aaKnown RBP22.99■■□□□ 1.27
RAB40C-201ENST00000248139 ANKRD16Q6P6B7 361 aa22.99■■□□□ 1.27
RAB40C-201ENST00000248139 CDH24Q86UP0 819 aa22.99■■□□□ 1.27
RAB40C-201ENST00000248139 SFXN2Q96NB2 322 aa22.99■■□□□ 1.27
RAB40C-201ENST00000248139 TAS2R4Q9NYW5 299 aa22.99■■□□□ 1.27
RAB40C-201ENST00000248139 MRTO4Q9UKD2 239 aaKnown RBP22.99■■□□□ 1.27
RAB40C-201ENST00000248139 LOC101059948A0A1B0GTJ6 334 aa22.98■■□□□ 1.27
RAB40C-201ENST00000248139 IFNA7P01567 189 aa22.98■■□□□ 1.27
RAB40C-201ENST00000248139 SLC6A8P48029 635 aa22.98■■□□□ 1.27
RAB40C-201ENST00000248139 H2BFSP57053 126 aa22.98■■□□□ 1.27
RAB40C-201ENST00000248139 ZNF679Q8IYX0 411 aa22.98■■□□□ 1.27
RAB40C-201ENST00000248139 EID2Q8N6I1 236 aa22.98■■□□□ 1.27
RAB40C-201ENST00000248139 ABHD6Q9BV23 337 aa22.98■■□□□ 1.27
RAB40C-201ENST00000248139 VN1R1Q9GZP7 353 aa22.98■■□□□ 1.27
RAB40C-201ENST00000248139 ZNF275Q9NSD4 429 aaPredicted RBP22.98■■□□□ 1.27
RAB40C-201ENST00000248139 TCRBV16S1A1N1A0A5B0 115 aa22.98■■□□□ 1.27
RAB40C-201ENST00000248139 ALG1L2C9J202 215 aa22.98■■□□□ 1.27
RAB40C-201ENST00000248139 TEX46H3BTG2 121 aa22.98■■□□□ 1.27
RAB40C-201ENST00000248139 ZNF354AO60765 605 aaPredicted RBP22.98■■□□□ 1.27
RAB40C-201ENST00000248139 PDGFAP04085 211 aa22.98■■□□□ 1.27
RAB40C-201ENST00000248139 C1orf140Q5VVS0 124 aa22.98■■□□□ 1.27
RAB40C-201ENST00000248139 SYT13Q7L8C5 426 aa22.98■■□□□ 1.27
RAB40C-201ENST00000248139 OR1J4Q8NGS1 313 aa22.98■■□□□ 1.27
RAB40C-201ENST00000248139 ANGPTL6Q8NI99 470 aa22.98■■□□□ 1.27
RAB40C-201ENST00000248139 TTC9Q92623 222 aa22.98■■□□□ 1.27
RAB40C-201ENST00000248139 MMACHCQ9Y4U1 282 aa22.98■■□□□ 1.27
RAB40C-201ENST00000248139 ASCC3Q8N3C0 2202 aaKnown RBP22.98■■□□□ 1.27
RAB40C-201ENST00000248139 IGLV1-36A0A0B4J1U3 117 aa22.97■■□□□ 1.27
RAB40C-201ENST00000248139 SHISA8B8ZZ34 492 aa22.97■■□□□ 1.27
RAB40C-201ENST00000248139 PGCP20142 388 aa22.97■■□□□ 1.27
RAB40C-201ENST00000248139 MRPS10P82664 201 aaKnown RBP22.97■■□□□ 1.27
RAB40C-201ENST00000248139 SIGIRRQ6IA17 410 aa22.97■■□□□ 1.27
RAB40C-201ENST00000248139 CORO6Q6QEF8 472 aa22.97■■□□□ 1.27
RAB40C-201ENST00000248139 ZNF519Q8TB69 540 aa22.97■■□□□ 1.27
RAB40C-201ENST00000248139 ZNF304Q9HCX3 659 aa22.97■■□□□ 1.27
RAB40C-201ENST00000248139 TMEM272A0A1B0GTI8 110 aa22.97■■□□□ 1.27
RAB40C-201ENST00000248139 SLC22A23A1A5C7 686 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms