RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 OR2AK2Q8NG84 335 aa8.47□□□□□ -1.05
COL21A1-201ENST00000244728 PHYHIPQ92561 330 aa8.47□□□□□ -1.05
COL21A1-201ENST00000244728 FOXRED1Q96CU9 486 aaPredicted RBP8.47□□□□□ -1.05
COL21A1-201ENST00000244728 LCORQ96JN0 433 aaPredicted RBP8.47□□□□□ -1.05
COL21A1-201ENST00000244728 NECAB3Q96P71 396 aaPredicted RBP8.47□□□□□ -1.05
COL21A1-201ENST00000244728 C12orf10Q9HB07 376 aa8.47□□□□□ -1.05
COL21A1-201ENST00000244728 FBXL4Q9UKA2 621 aa8.47□□□□□ -1.05
COL21A1-201ENST00000244728 HS3ST3A1Q9Y663 406 aa8.47□□□□□ -1.05
COL21A1-201ENST00000244728 PDCD11Q14690 1871 aaKnown RBP8.47□□□□□ -1.05
COL21A1-201ENST00000244728 A0A1B0GV50 99 aa8.47□□□□□ -1.05
COL21A1-201ENST00000244728 TUBAL3A6NHL2 446 aa8.47□□□□□ -1.05
COL21A1-201ENST00000244728 SCGNO76038 276 aa8.47□□□□□ -1.05
COL21A1-201ENST00000244728 FOLR3P41439 243 aa8.47□□□□□ -1.05
COL21A1-201ENST00000244728 SLC6A8P48029 635 aa8.47□□□□□ -1.05
COL21A1-201ENST00000244728 NR0B2Q15466 257 aa8.47□□□□□ -1.05
COL21A1-201ENST00000244728 SLC22A6Q4U2R8 563 aa8.47□□□□□ -1.05
COL21A1-201ENST00000244728 LIPNQ5VXI9 398 aa8.47□□□□□ -1.05
COL21A1-201ENST00000244728 NHLRC1Q6VVB1 395 aa8.47□□□□□ -1.05
COL21A1-201ENST00000244728 ZNF793Q6ZN11 406 aa8.47□□□□□ -1.05
COL21A1-201ENST00000244728 Q6ZTK2 550 aa8.47□□□□□ -1.05
COL21A1-201ENST00000244728 OR4N2Q8NGD1 307 aa8.47□□□□□ -1.05
COL21A1-201ENST00000244728 NAT6Q93015 286 aa8.47□□□□□ -1.05
COL21A1-201ENST00000244728 CXorf58Q96LI9 332 aa8.47□□□□□ -1.05
COL21A1-201ENST00000244728 TEX101Q9BY14 249 aa8.47□□□□□ -1.05
COL21A1-201ENST00000244728 C20orf141Q9NUB4 165 aa8.47□□□□□ -1.05
COL21A1-201ENST00000244728 NYNRINQ9P2P1 1898 aaKnown RBP8.47□□□□□ -1.05
COL21A1-201ENST00000244728 TCRBV16S1A1N1A0A5B0 115 aa8.46□□□□□ -1.05
COL21A1-201ENST00000244728 PYCARD-AS1I3L0S3 204 aa8.46□□□□□ -1.05
COL21A1-201ENST00000244728 PLPP2O43688 288 aa8.46□□□□□ -1.05
COL21A1-201ENST00000244728 BRINP1O60477 761 aa8.46□□□□□ -1.05
COL21A1-201ENST00000244728 COL9A1P20849 921 aa8.46□□□□□ -1.05
COL21A1-201ENST00000244728 RBMXP38159 391 aaKnown RBP8.46□□□□□ -1.05
COL21A1-201ENST00000244728 C14orf28Q4W4Y0 310 aa8.46□□□□□ -1.05
COL21A1-201ENST00000244728 AWAT2Q6E213 333 aa8.46□□□□□ -1.05
COL21A1-201ENST00000244728 TMEM92Q6UXU6 159 aa8.46□□□□□ -1.05
COL21A1-201ENST00000244728 SSX6Q7RTT6 188 aa8.46□□□□□ -1.05
COL21A1-201ENST00000244728 ACBD4Q8NC06 268 aa8.46□□□□□ -1.05
COL21A1-201ENST00000244728 ZNF768Q9H5H4 540 aaKnown RBP8.46□□□□□ -1.05
COL21A1-201ENST00000244728 EXOGQ9Y2C4 368 aaKnown RBP8.46□□□□□ -1.05
COL21A1-201ENST00000244728 A0A0G2JMZ2 1700 aa8.46□□□□□ -1.05
COL21A1-201ENST00000244728 LRRC37A2A6NM11 1700 aa8.46□□□□□ -1.05
COL21A1-201ENST00000244728 DOCK6Q96HP0 2047 aa8.46□□□□□ -1.05
COL21A1-201ENST00000244728 DSPPQ9NZW4 1301 aa8.46□□□□□ -1.05
COL21A1-201ENST00000244728 A0A0B4J2A0 478 aa8.46□□□□□ -1.06
COL21A1-201ENST00000244728 C7orf66A4D0T2 115 aa8.46□□□□□ -1.06
COL21A1-201ENST00000244728 CDK2AP1O14519 115 aa8.46□□□□□ -1.06
COL21A1-201ENST00000244728 DVL2O14641 736 aa8.46□□□□□ -1.06
COL21A1-201ENST00000244728 PLRG1O43660 514 aaKnown RBP8.46□□□□□ -1.06
COL21A1-201ENST00000244728 CTSVO60911 334 aa8.46□□□□□ -1.06
COL21A1-201ENST00000244728 SULT1A3P0DMM9 295 aa8.46□□□□□ -1.06
COL21A1-201ENST00000244728 SULT1A4P0DMN0 295 aa8.46□□□□□ -1.06
COL21A1-201ENST00000244728 ZNF28P17035 718 aa8.46□□□□□ -1.06
COL21A1-201ENST00000244728 ACHEP22303 614 aa8.46□□□□□ -1.06
COL21A1-201ENST00000244728 GALP22466 123 aa8.46□□□□□ -1.06
COL21A1-201ENST00000244728 MAGEB1P43366 347 aa8.46□□□□□ -1.06
COL21A1-201ENST00000244728 P2RX1P51575 399 aa8.46□□□□□ -1.06
COL21A1-201ENST00000244728 RAG2P55895 527 aa8.46□□□□□ -1.06
COL21A1-201ENST00000244728 PPP1CAP62136 330 aa8.46□□□□□ -1.06
COL21A1-201ENST00000244728 FLI1Q01543 452 aaPredicted RBP8.46□□□□□ -1.06
COL21A1-201ENST00000244728 ALKBH1Q13686 389 aaKnown RBP8.46□□□□□ -1.06
COL21A1-201ENST00000244728 GLDNQ6ZMI3 551 aaPredicted RBP8.46□□□□□ -1.06
COL21A1-201ENST00000244728 RAB11FIP2Q7L804 512 aa8.46□□□□□ -1.06
COL21A1-201ENST00000244728 LRRC18Q8N456 261 aa8.46□□□□□ -1.06
COL21A1-201ENST00000244728 MARC2Q969Z3 335 aa8.46□□□□□ -1.06
COL21A1-201ENST00000244728 WDR34Q96EX3 536 aa8.46□□□□□ -1.06
COL21A1-201ENST00000244728 WDR89Q96FK6 387 aaPredicted RBP8.46□□□□□ -1.06
COL21A1-201ENST00000244728 SORCS2Q96PQ0 1159 aa8.46□□□□□ -1.06
COL21A1-201ENST00000244728 ZNF587Q96SQ5 575 aaPredicted RBP8.46□□□□□ -1.06
COL21A1-201ENST00000244728 ARHGDIGQ99819 225 aa8.46□□□□□ -1.06
COL21A1-201ENST00000244728 DUSP23Q9BVJ7 150 aa8.46□□□□□ -1.06
COL21A1-201ENST00000244728 EIF5A2Q9GZV4 153 aaKnown RBP8.46□□□□□ -1.06
COL21A1-201ENST00000244728 ZNF700Q9H0M5 742 aa8.46□□□□□ -1.06
COL21A1-201ENST00000244728 GHITMQ9H3K2 345 aa8.46□□□□□ -1.06
COL21A1-201ENST00000244728 SHPKQ9UHJ6 478 aa8.46□□□□□ -1.06
COL21A1-201ENST00000244728 ETV7Q9Y603 341 aa8.46□□□□□ -1.06
COL21A1-201ENST00000244728 A0A1W2PPC4 97 aa8.46□□□□□ -1.06
COL21A1-201ENST00000244728 SUSD5O60279 629 aa8.46□□□□□ -1.06
COL21A1-201ENST00000244728 GALR3O60755 368 aaPredicted RBP8.46□□□□□ -1.06
COL21A1-201ENST00000244728 ADRA2AP08913 450 aa8.46□□□□□ -1.06
COL21A1-201ENST00000244728 PET100P0DJ07 73 aa8.46□□□□□ -1.06
COL21A1-201ENST00000244728 SLC2A1P11166 492 aa8.46□□□□□ -1.06
COL21A1-201ENST00000244728 HOXB9P17482 250 aaPredicted RBP8.46□□□□□ -1.06
COL21A1-201ENST00000244728 CRABP1P29762 137 aa8.46□□□□□ -1.06
COL21A1-201ENST00000244728 HLXQ14774 488 aaPredicted RBP8.46□□□□□ -1.06
COL21A1-201ENST00000244728 SLC25A30Q5SVS4 291 aa8.46□□□□□ -1.06
COL21A1-201ENST00000244728 C19orf48Q6RUI8 117 aa8.46□□□□□ -1.06
COL21A1-201ENST00000244728 PXKQ7Z7A4 578 aa8.46□□□□□ -1.06
COL21A1-201ENST00000244728 OR11H4Q8NGC9 324 aa8.46□□□□□ -1.06
COL21A1-201ENST00000244728 OR5D18Q8NGL1 313 aa8.46□□□□□ -1.06
COL21A1-201ENST00000244728 BAHD1Q8TBE0 780 aaPredicted RBP8.46□□□□□ -1.06
COL21A1-201ENST00000244728 BMFQ96LC9 184 aa8.46□□□□□ -1.06
COL21A1-201ENST00000244728 NAA11Q9BSU3 229 aaPredicted RBP8.46□□□□□ -1.06
COL21A1-201ENST00000244728 POFUT1Q9H488 388 aa8.46□□□□□ -1.06
COL21A1-201ENST00000244728 ZNF160Q9HCG1 818 aa8.46□□□□□ -1.06
COL21A1-201ENST00000244728 RPS10P5Q9NQ39 176 aa8.46□□□□□ -1.06
COL21A1-201ENST00000244728 B4GALT7Q9UBV7 327 aa8.46□□□□□ -1.06
COL21A1-201ENST00000244728 C19orf53Q9UNZ5 99 aaPredicted RBP8.46□□□□□ -1.06
COL21A1-201ENST00000244728 C14orf166Q9Y224 244 aaKnown RBP8.46□□□□□ -1.06
COL21A1-201ENST00000244728 PLXNA1Q9UIW2 1896 aa8.46□□□□□ -1.06
COL21A1-201ENST00000244728 TRAV1-2A0A0B4J238 106 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms