RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 GTPBP8Q8N3Z3 284 aaPredicted RBP16.53■□□□□ 0.24
HOXC11-201ENST00000243082 OR10AC1Q8NH08 325 aa16.53■□□□□ 0.24
HOXC11-201ENST00000243082 RNF128Q8TEB7 428 aa16.53■□□□□ 0.24
HOXC11-201ENST00000243082 SLC25A43Q8WUT9 341 aaPredicted RBP16.53■□□□□ 0.24
HOXC11-201ENST00000243082 FARSAQ9Y285 508 aaKnown RBP16.53■□□□□ 0.24
HOXC11-201ENST00000243082 FREM3P0C091 2139 aa16.53■□□□□ 0.24
HOXC11-201ENST00000243082 CACNA1CQ13936 2221 aa16.53■□□□□ 0.24
HOXC11-201ENST00000243082 A0A087WZY1 265 aa16.53■□□□□ 0.24
HOXC11-201ENST00000243082 ANKRD61A6NGH8 418 aa16.53■□□□□ 0.24
HOXC11-201ENST00000243082 ZNF814B7Z6K7 855 aa16.53■□□□□ 0.24
HOXC11-201ENST00000243082 C9orf172C9J069 976 aa16.53■□□□□ 0.24
HOXC11-201ENST00000243082 PDCD5O14737 125 aa16.53■□□□□ 0.24
HOXC11-201ENST00000243082 ZNF254O75437 659 aa16.53■□□□□ 0.24
HOXC11-201ENST00000243082 JMJD7P0C870 316 aa16.53■□□□□ 0.24
HOXC11-201ENST00000243082 FKBP2P26885 142 aaKnown RBP16.53■□□□□ 0.24
HOXC11-201ENST00000243082 SFTPDP35247 375 aa16.53■□□□□ 0.24
HOXC11-201ENST00000243082 RASGEF1BQ0VAM2 473 aa16.53■□□□□ 0.24
HOXC11-201ENST00000243082 SSPNQ14714 243 aa16.53■□□□□ 0.24
HOXC11-201ENST00000243082 PCK2Q16822 640 aa16.53■□□□□ 0.24
HOXC11-201ENST00000243082 ZNF676Q8N7Q3 588 aa16.53■□□□□ 0.24
HOXC11-201ENST00000243082 ZNF454Q8N9F8 522 aa16.53■□□□□ 0.24
HOXC11-201ENST00000243082 C19orf18Q8NEA5 215 aa16.53■□□□□ 0.24
HOXC11-201ENST00000243082 LIN37Q96GY3 246 aaPredicted RBP16.53■□□□□ 0.24
HOXC11-201ENST00000243082 GNRHR2Q96P88 292 aa16.53■□□□□ 0.24
HOXC11-201ENST00000243082 MRPL13Q9BYD1 178 aaKnown RBP16.53■□□□□ 0.24
HOXC11-201ENST00000243082 COMMD4Q9H0A8 199 aa16.53■□□□□ 0.24
HOXC11-201ENST00000243082 BRD7Q9NPI1 651 aa16.53■□□□□ 0.24
HOXC11-201ENST00000243082 HPF1Q9NWY4 346 aa16.53■□□□□ 0.24
HOXC11-201ENST00000243082 HDGFL3Q9Y3E1 203 aa16.53■□□□□ 0.24
HOXC11-201ENST00000243082 TRABD2BA6NFA1 517 aa16.52■□□□□ 0.24
HOXC11-201ENST00000243082 PNPP00491 289 aa16.52■□□□□ 0.24
HOXC11-201ENST00000243082 LIFP15018 202 aa16.52■□□□□ 0.24
HOXC11-201ENST00000243082 MAPK3P27361 379 aaPredicted RBP16.52■□□□□ 0.24
HOXC11-201ENST00000243082 SOX2P48431 317 aa16.52■□□□□ 0.24
HOXC11-201ENST00000243082 PITPNBP48739 271 aa16.52■□□□□ 0.24
HOXC11-201ENST00000243082 KCTD18Q6PI47 426 aaPredicted RBP16.52■□□□□ 0.24
HOXC11-201ENST00000243082 MDGA2Q7Z553 956 aa16.52■□□□□ 0.24
HOXC11-201ENST00000243082 OR51A4Q8NGJ6 313 aa16.52■□□□□ 0.24
HOXC11-201ENST00000243082 HPS1Q92902 700 aa16.52■□□□□ 0.24
HOXC11-201ENST00000243082 SPATA2Q9UM82 520 aa16.52■□□□□ 0.24
HOXC11-201ENST00000243082 TRBV5-7A0A0A0MS05 114 aa16.52■□□□□ 0.23
HOXC11-201ENST00000243082 IFITM5A6NNB3 132 aa16.52■□□□□ 0.23
HOXC11-201ENST00000243082 G3V3Y1 287 aa16.52■□□□□ 0.23
HOXC11-201ENST00000243082 KHDRBS3O75525 346 aaKnown RBP16.52■□□□□ 0.23
HOXC11-201ENST00000243082 ZNF432O94892 652 aa16.52■□□□□ 0.23
HOXC11-201ENST00000243082 DPP4P27487 766 aa16.52■□□□□ 0.23
HOXC11-201ENST00000243082 CCR9P51686 369 aa16.52■□□□□ 0.23
HOXC11-201ENST00000243082 CHAF1BQ13112 559 aa16.52■□□□□ 0.23
HOXC11-201ENST00000243082 ZNF239Q16600 458 aaKnown RBP16.52■□□□□ 0.23
HOXC11-201ENST00000243082 ODF4Q2M2E3 257 aa16.52■□□□□ 0.23
HOXC11-201ENST00000243082 STAC2Q6ZMT1 411 aa16.52■□□□□ 0.23
HOXC11-201ENST00000243082 KRT77Q7Z794 578 aa16.52■□□□□ 0.23
HOXC11-201ENST00000243082 UEVLDQ8IX04 471 aa16.52■□□□□ 0.23
HOXC11-201ENST00000243082 UBE2J2Q8N2K1 259 aa16.52■□□□□ 0.23
HOXC11-201ENST00000243082 OR52N5Q8NH56 324 aa16.52■□□□□ 0.23
HOXC11-201ENST00000243082 ABHD1Q96SE0 405 aa16.52■□□□□ 0.23
HOXC11-201ENST00000243082 SACM1LQ9NTJ5 587 aa16.52■□□□□ 0.23
HOXC11-201ENST00000243082 AIPO00170 330 aa16.51■□□□□ 0.23
HOXC11-201ENST00000243082 TRAF3IP2O43734 574 aaPredicted RBP16.51■□□□□ 0.23
HOXC11-201ENST00000243082 ZIC3O60481 467 aa16.51■□□□□ 0.23
HOXC11-201ENST00000243082 ICAM2P13598 275 aa16.51■□□□□ 0.23
HOXC11-201ENST00000243082 DSCR4P56555 118 aaPredicted RBP16.51■□□□□ 0.23
HOXC11-201ENST00000243082 ZNF433Q8N7K0 673 aaPredicted RBP16.51■□□□□ 0.23
HOXC11-201ENST00000243082 OR1J4Q8NGS1 313 aa16.51■□□□□ 0.23
HOXC11-201ENST00000243082 GPR148Q8TDV2 347 aa16.51■□□□□ 0.23
HOXC11-201ENST00000243082 CHAC2Q8WUX2 184 aa16.51■□□□□ 0.23
HOXC11-201ENST00000243082 MIB2Q96AX9 1013 aa16.51■□□□□ 0.23
HOXC11-201ENST00000243082 WACQ9BTA9 647 aa16.51■□□□□ 0.23
HOXC11-201ENST00000243082 MMP28Q9H239 520 aa16.51■□□□□ 0.23
HOXC11-201ENST00000243082 TEKT2Q9UIF3 430 aa16.51■□□□□ 0.23
HOXC11-201ENST00000243082 LRP12Q9Y561 859 aa16.51■□□□□ 0.23
HOXC11-201ENST00000243082 GPR171O14626 319 aa16.5■□□□□ 0.23
HOXC11-201ENST00000243082 RAMP1O60894 148 aa16.5■□□□□ 0.23
HOXC11-201ENST00000243082 SLC43A1O75387 559 aa16.5■□□□□ 0.23
HOXC11-201ENST00000243082 HPP00738 406 aa16.5■□□□□ 0.23
HOXC11-201ENST00000243082 ZNF823P16415 610 aa16.5■□□□□ 0.23
HOXC11-201ENST00000243082 ADRA2CP18825 462 aa16.5■□□□□ 0.23
HOXC11-201ENST00000243082 KLK2P20151 261 aa16.5■□□□□ 0.23
HOXC11-201ENST00000243082 KIR2DL3P43628 341 aa16.5■□□□□ 0.23
HOXC11-201ENST00000243082 HES5Q5TA89 166 aa16.5■□□□□ 0.23
HOXC11-201ENST00000243082 OR7E24Q6IFN5 339 aa16.5■□□□□ 0.23
HOXC11-201ENST00000243082 LRRTM1Q86UE6 522 aa16.5■□□□□ 0.23
HOXC11-201ENST00000243082 LGALS14Q8TCE9 139 aa16.5■□□□□ 0.23
HOXC11-201ENST00000243082 ST7LQ8TDW4 575 aa16.5■□□□□ 0.23
HOXC11-201ENST00000243082 PPP1R14AQ96A00 147 aa16.5■□□□□ 0.23
HOXC11-201ENST00000243082 ITPKCQ96DU7 683 aa16.5■□□□□ 0.23
HOXC11-201ENST00000243082 TCF7L1Q9HCS4 588 aa16.5■□□□□ 0.23
HOXC11-201ENST00000243082 FOXJ2Q9P0K8 574 aa16.5■□□□□ 0.23
HOXC11-201ENST00000243082 KLHL9Q9P2J3 617 aa16.5■□□□□ 0.23
HOXC11-201ENST00000243082 CLEC4AQ9UMR7 237 aa16.5■□□□□ 0.23
HOXC11-201ENST00000243082 SLC22A13Q9Y226 551 aa16.5■□□□□ 0.23
HOXC11-201ENST00000243082 PCDHGA9Q9Y5G4 932 aaKnown RBP16.5■□□□□ 0.23
HOXC11-201ENST00000243082 V9GY05 133 aa16.5■□□□□ 0.23
HOXC11-201ENST00000243082 MED12Q93074 2177 aa16.5■□□□□ 0.23
HOXC11-201ENST00000243082 PCSK5Q92824 1860 aa16.5■□□□□ 0.23
HOXC11-201ENST00000243082 LANCL1O43813 399 aa16.5■□□□□ 0.23
HOXC11-201ENST00000243082 AQP8O94778 261 aa16.5■□□□□ 0.23
HOXC11-201ENST00000243082 RAF1P04049 648 aa16.5■□□□□ 0.23
HOXC11-201ENST00000243082 HRGP04196 525 aa16.5■□□□□ 0.23
HOXC11-201ENST00000243082 RIDAP52758 137 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms