RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 CORO6Q6QEF8 472 aa7.77□□□□□ -1.17
VPS4B-201ENST00000238497 LINC00346Q8IVM7 164 aa7.77□□□□□ -1.17
VPS4B-201ENST00000238497 ADAMTS18Q8TE60 1221 aa7.77□□□□□ -1.17
VPS4B-201ENST00000238497 TSEN15Q8WW01 171 aaKnown RBP7.77□□□□□ -1.17
VPS4B-201ENST00000238497 TMCO6Q96DC7 493 aa7.77□□□□□ -1.17
VPS4B-201ENST00000238497 PELI1Q96FA3 418 aa7.77□□□□□ -1.17
VPS4B-201ENST00000238497 SDHCQ99643 169 aaPredicted RBP7.77□□□□□ -1.17
VPS4B-201ENST00000238497 WWTR1Q9GZV5 400 aa7.77□□□□□ -1.17
VPS4B-201ENST00000238497 MED17Q9NVC6 651 aa7.77□□□□□ -1.17
VPS4B-201ENST00000238497 MED29Q9NX70 200 aa7.77□□□□□ -1.17
VPS4B-201ENST00000238497 SF3B6Q9Y3B4 125 aaKnown RBP7.77□□□□□ -1.17
VPS4B-201ENST00000238497 AKAP6Q13023 2319 aa7.77□□□□□ -1.17
VPS4B-201ENST00000238497 ITGA10O75578 1167 aa7.77□□□□□ -1.17
VPS4B-201ENST00000238497 LYPD3O95274 346 aa7.77□□□□□ -1.17
VPS4B-201ENST00000238497 AHSA1O95433 338 aa7.77□□□□□ -1.17
VPS4B-201ENST00000238497 DDAH2O95865 285 aa7.77□□□□□ -1.17
VPS4B-201ENST00000238497 RENP00797 406 aa7.77□□□□□ -1.17
VPS4B-201ENST00000238497 CSF3P09919 207 aa7.77□□□□□ -1.17
VPS4B-201ENST00000238497 PGCP20142 388 aa7.77□□□□□ -1.17
VPS4B-201ENST00000238497 RAB3BP20337 219 aa7.77□□□□□ -1.17
VPS4B-201ENST00000238497 COL8A1P27658 744 aa7.77□□□□□ -1.17
VPS4B-201ENST00000238497 LTBQ06643 244 aa7.77□□□□□ -1.17
VPS4B-201ENST00000238497 KLHL26Q53HC5 615 aa7.77□□□□□ -1.17
VPS4B-201ENST00000238497 OR7E24Q6IFN5 339 aa7.77□□□□□ -1.17
VPS4B-201ENST00000238497 SLC25A25Q6KCM7 469 aa7.77□□□□□ -1.17
VPS4B-201ENST00000238497 IGFL2Q6UWQ7 119 aa7.77□□□□□ -1.17
VPS4B-201ENST00000238497 ARSKQ6UWY0 536 aa7.77□□□□□ -1.17
VPS4B-201ENST00000238497 OR5H6Q8NGV6 325 aa7.77□□□□□ -1.17
VPS4B-201ENST00000238497 ZNF721Q8TF20 911 aa7.77□□□□□ -1.17
VPS4B-201ENST00000238497 ARL5BQ96KC2 179 aa7.77□□□□□ -1.17
VPS4B-201ENST00000238497 DERL3Q96Q80 235 aa7.77□□□□□ -1.17
VPS4B-201ENST00000238497 FKRPQ9H9S5 495 aa7.77□□□□□ -1.17
VPS4B-201ENST00000238497 NOX4Q9NPH5 578 aa7.77□□□□□ -1.17
VPS4B-201ENST00000238497 HPF1Q9NWY4 346 aa7.77□□□□□ -1.17
VPS4B-201ENST00000238497 TAS2R10Q9NYW0 307 aa7.77□□□□□ -1.17
VPS4B-201ENST00000238497 ERRFI1Q9UJM3 462 aaPredicted RBP7.77□□□□□ -1.17
VPS4B-201ENST00000238497 NPFFR2Q9Y5X5 522 aa7.77□□□□□ -1.17
VPS4B-201ENST00000238497 SPENQ96T58 3664 aaKnown RBP7.76□□□□□ -1.17
VPS4B-201ENST00000238497 A0A1W2PNR3 127 aa7.76□□□□□ -1.17
VPS4B-201ENST00000238497 MEIS3P1A6NDR6 274 aa7.76□□□□□ -1.17
VPS4B-201ENST00000238497 ZNF354AO60765 605 aaPredicted RBP7.76□□□□□ -1.17
VPS4B-201ENST00000238497 OR2J2O76002 312 aa7.76□□□□□ -1.17
VPS4B-201ENST00000238497 CD14P08571 375 aa7.76□□□□□ -1.17
VPS4B-201ENST00000238497 HLA-DOBP13765 273 aa7.76□□□□□ -1.17
VPS4B-201ENST00000238497 CASP6P55212 293 aa7.76□□□□□ -1.17
VPS4B-201ENST00000238497 PLGLB1Q02325 96 aa7.76□□□□□ -1.17
VPS4B-201ENST00000238497 ZNF141Q15928 474 aa7.76□□□□□ -1.17
VPS4B-201ENST00000238497 TBRG1Q3YBR2 411 aa7.76□□□□□ -1.17
VPS4B-201ENST00000238497 C3P1Q6ZMU1 363 aa7.76□□□□□ -1.17
VPS4B-201ENST00000238497 LINGO2Q7L985 606 aa7.76□□□□□ -1.17
VPS4B-201ENST00000238497 MDGA2Q7Z553 956 aa7.76□□□□□ -1.17
VPS4B-201ENST00000238497 LUZP2Q86TE4 346 aa7.76□□□□□ -1.17
VPS4B-201ENST00000238497 BEST4Q8NFU0 473 aa7.76□□□□□ -1.17
VPS4B-201ENST00000238497 OR4M1Q8NGD0 313 aa7.76□□□□□ -1.17
VPS4B-201ENST00000238497 OR52N1Q8NH53 320 aa7.76□□□□□ -1.17
VPS4B-201ENST00000238497 ZNF417Q8TAU3 575 aa7.76□□□□□ -1.17
VPS4B-201ENST00000238497 ZNF587Q96SQ5 575 aaPredicted RBP7.76□□□□□ -1.17
VPS4B-201ENST00000238497 NDEL1Q9GZM8 345 aa7.76□□□□□ -1.17
VPS4B-201ENST00000238497 RNF32Q9H0A6 362 aa7.76□□□□□ -1.17
VPS4B-201ENST00000238497 TCF7L1Q9HCS4 588 aa7.76□□□□□ -1.17
VPS4B-201ENST00000238497 TBC1D24Q9ULP9 559 aa7.76□□□□□ -1.17
VPS4B-201ENST00000238497 V9GYH0 126 aa7.76□□□□□ -1.17
VPS4B-201ENST00000238497 GTF3C1Q12789 2109 aa7.76□□□□□ -1.17
VPS4B-201ENST00000238497 TMED7-TICAM2A0A0A6YYA0 188 aa7.76□□□□□ -1.17
VPS4B-201ENST00000238497 EIF4EP06730 217 aaKnown RBP7.76□□□□□ -1.17
VPS4B-201ENST00000238497 CYC1P08574 325 aa7.76□□□□□ -1.17
VPS4B-201ENST00000238497 ZNF24P17028 368 aa7.76□□□□□ -1.17
VPS4B-201ENST00000238497 MAP3K8P41279 467 aa7.76□□□□□ -1.17
VPS4B-201ENST00000238497 PRPS1P60891 318 aa7.76□□□□□ -1.17
VPS4B-201ENST00000238497 RNF4P78317 190 aa7.76□□□□□ -1.17
VPS4B-201ENST00000238497 RBPJQ06330 500 aa7.76□□□□□ -1.17
VPS4B-201ENST00000238497 ZNF74Q16587 644 aa7.76□□□□□ -1.17
VPS4B-201ENST00000238497 C4orf17Q53FE4 359 aa7.76□□□□□ -1.17
VPS4B-201ENST00000238497 HSD17B12Q53GQ0 312 aa7.76□□□□□ -1.17
VPS4B-201ENST00000238497 LIPNQ5VXI9 398 aa7.76□□□□□ -1.17
VPS4B-201ENST00000238497 NR2C2APQ86WQ0 139 aa7.76□□□□□ -1.17
VPS4B-201ENST00000238497 NPEPL1Q8NDH3 523 aa7.76□□□□□ -1.17
VPS4B-201ENST00000238497 KISS1RQ969F8 398 aaPredicted RBP7.76□□□□□ -1.17
VPS4B-201ENST00000238497 ATF6BQ99941 703 aa7.76□□□□□ -1.17
VPS4B-201ENST00000238497 SRRQ9GZT4 340 aa7.76□□□□□ -1.17
VPS4B-201ENST00000238497 ABCG5Q9H222 651 aa7.76□□□□□ -1.17
VPS4B-201ENST00000238497 SLC5A6Q9Y289 635 aa7.76□□□□□ -1.17
VPS4B-201ENST00000238497 TMED7Q9Y3B3 224 aa7.76□□□□□ -1.17
VPS4B-201ENST00000238497 DOCK7Q96N67 2140 aa7.76□□□□□ -1.17
VPS4B-201ENST00000238497 UNC79Q9P2D8 2635 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 IGKV1D-42A0A075B6H8 117 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 ISPDA4D126 451 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 ZG16O60844 167 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 AKR7A3O95154 331 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 IL33O95760 270 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 ABOP16442 354 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 SSR4P51571 173 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 EGR4Q05215 589 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 FMODQ06828 376 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 SRSF1Q07955 248 aaKnown RBP eCLIP7.75□□□□□ -1.17
VPS4B-201ENST00000238497 SFXN4Q6P4A7 337 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 DPY19L2P2Q6ZN68 376 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 GPALPP1Q8IXQ4 340 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 UBQLNLQ8IYU4 475 aa7.75□□□□□ -1.17
VPS4B-201ENST00000238497 OR6V1Q8N148 313 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms