RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 EXD3Q8N9H8 876 aa18.6■□□□□ 0.57
SNX3-201ENST00000230085 RCBTB1Q8NDN9 531 aa18.6■□□□□ 0.57
SNX3-201ENST00000230085 ZDHHC12Q96GR4 267 aa18.6■□□□□ 0.57
SNX3-201ENST00000230085 MAP3K3Q99759 626 aa18.6■□□□□ 0.57
SNX3-201ENST00000230085 ADAP2Q9NPF8 381 aa18.6■□□□□ 0.57
SNX3-201ENST00000230085 IER3IP1Q9Y5U9 82 aa18.6■□□□□ 0.57
SNX3-201ENST00000230085 ACOD1A6NK06 481 aa18.59■□□□□ 0.57
SNX3-201ENST00000230085 RFPL4AA6NLU0 287 aa18.59■□□□□ 0.57
SNX3-201ENST00000230085 RFPL4AL1F8VTS6 287 aa18.59■□□□□ 0.57
SNX3-201ENST00000230085 NPIPB9F8W1W9 429 aa18.59■□□□□ 0.57
SNX3-201ENST00000230085 IMPA2O14732 288 aa18.59■□□□□ 0.57
SNX3-201ENST00000230085 ABHD16AO95870 558 aa18.59■□□□□ 0.57
SNX3-201ENST00000230085 MT-CO3P00414 261 aa18.59■□□□□ 0.57
SNX3-201ENST00000230085 ICAM2P13598 275 aa18.59■□□□□ 0.57
SNX3-201ENST00000230085 MGMTP16455 207 aa18.59■□□□□ 0.57
SNX3-201ENST00000230085 RAB3AP20336 220 aa18.59■□□□□ 0.57
SNX3-201ENST00000230085 NAA10P41227 235 aaPredicted RBP18.59■□□□□ 0.57
SNX3-201ENST00000230085 DBPQ10586 325 aaPredicted RBP18.59■□□□□ 0.57
SNX3-201ENST00000230085 KIR2DS3Q14952 304 aa18.59■□□□□ 0.57
SNX3-201ENST00000230085 MANEAQ5SRI9 462 aa18.59■□□□□ 0.57
SNX3-201ENST00000230085 SFRP5Q5T4F7 317 aa18.59■□□□□ 0.57
SNX3-201ENST00000230085 FBXO42Q6P3S6 717 aa18.59■□□□□ 0.57
SNX3-201ENST00000230085 ANKRD16Q6P6B7 361 aa18.59■□□□□ 0.57
SNX3-201ENST00000230085 SLC16A9Q7RTY1 509 aa18.59■□□□□ 0.57
SNX3-201ENST00000230085 CAMKVQ8NCB2 501 aa18.59■□□□□ 0.57
SNX3-201ENST00000230085 ZNF417Q8TAU3 575 aa18.59■□□□□ 0.57
SNX3-201ENST00000230085 RIT1Q92963 219 aa18.59■□□□□ 0.57
SNX3-201ENST00000230085 ARL6Q9H0F7 186 aa18.59■□□□□ 0.57
SNX3-201ENST00000230085 TCF7L1Q9HCS4 588 aa18.59■□□□□ 0.57
SNX3-201ENST00000230085 MKKSQ9NPJ1 570 aaPredicted RBP18.59■□□□□ 0.57
SNX3-201ENST00000230085 IFT46Q9NQC8 304 aa18.59■□□□□ 0.57
SNX3-201ENST00000230085 ZNF107Q9UII5 783 aaPredicted RBP18.59■□□□□ 0.57
SNX3-201ENST00000230085 EFCAB7A8K855 629 aa18.58■□□□□ 0.57
SNX3-201ENST00000230085 MCIDASD6RGH6 385 aa18.58■□□□□ 0.57
SNX3-201ENST00000230085 H3BUI4 141 aa18.58■□□□□ 0.57
SNX3-201ENST00000230085 ARPC5O15511 151 aa18.58■□□□□ 0.57
SNX3-201ENST00000230085 MTRF1O75570 445 aaKnown RBP18.58■□□□□ 0.57
SNX3-201ENST00000230085 UPK3AO75631 287 aa18.58■□□□□ 0.57
SNX3-201ENST00000230085 CD8AP01732 235 aa18.58■□□□□ 0.57
SNX3-201ENST00000230085 H2AFB1P0C5Y9 115 aa18.58■□□□□ 0.57
SNX3-201ENST00000230085 ADRA2CP18825 462 aa18.58■□□□□ 0.57
SNX3-201ENST00000230085 AGTR1P30556 359 aa18.58■□□□□ 0.57
SNX3-201ENST00000230085 LSSP48449 732 aa18.58■□□□□ 0.57
SNX3-201ENST00000230085 PRPS1P60891 318 aa18.58■□□□□ 0.57
SNX3-201ENST00000230085 ZFP36L1Q07352 338 aaKnown RBP18.58■□□□□ 0.57
SNX3-201ENST00000230085 ZNF345Q14585 488 aa18.58■□□□□ 0.57
SNX3-201ENST00000230085 NHLRC1Q6VVB1 395 aa18.58■□□□□ 0.57
SNX3-201ENST00000230085 ABHD13Q7L211 337 aa18.58■□□□□ 0.57
SNX3-201ENST00000230085 ZNF454Q8N9F8 522 aa18.58■□□□□ 0.57
SNX3-201ENST00000230085 OIT3Q8WWZ8 545 aa18.58■□□□□ 0.57
SNX3-201ENST00000230085 GCDHQ92947 438 aaPredicted RBP18.58■□□□□ 0.57
SNX3-201ENST00000230085 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.58■□□□□ 0.57
SNX3-201ENST00000230085 PILRAQ9UKJ1 303 aa18.58■□□□□ 0.57
SNX3-201ENST00000230085 KCNK7Q9Y2U2 307 aa18.58■□□□□ 0.57
SNX3-201ENST00000230085 SLC6A5Q9Y345 797 aa18.58■□□□□ 0.57
SNX3-201ENST00000230085 ZNF337Q9Y3M9 751 aa18.58■□□□□ 0.57
SNX3-201ENST00000230085 PTPRBP23467 1997 aa18.58■□□□□ 0.57
SNX3-201ENST00000230085 ASPMQ8IZT6 3477 aa18.58■□□□□ 0.56
SNX3-201ENST00000230085 KIF26BQ2KJY2 2108 aa18.58■□□□□ 0.56
SNX3-201ENST00000230085 A0A087WUJ7 227 aa18.58■□□□□ 0.56
SNX3-201ENST00000230085 SULT1C2O00338 296 aa18.58■□□□□ 0.56
SNX3-201ENST00000230085 ZNF254O75437 659 aa18.58■□□□□ 0.56
SNX3-201ENST00000230085 ALKBH1Q13686 389 aaKnown RBP18.58■□□□□ 0.56
SNX3-201ENST00000230085 PHF19Q5T6S3 580 aa18.58■□□□□ 0.56
SNX3-201ENST00000230085 ALKAL2Q6UX46 152 aa18.58■□□□□ 0.56
SNX3-201ENST00000230085 OR4C16Q8NGL9 310 aa18.58■□□□□ 0.56
SNX3-201ENST00000230085 COQ8AQ8NI60 647 aa18.58■□□□□ 0.56
SNX3-201ENST00000230085 MRPS24Q96EL2 167 aaKnown RBP18.58■□□□□ 0.56
SNX3-201ENST00000230085 CCDC74BQ96LY2 380 aa18.58■□□□□ 0.56
SNX3-201ENST00000230085 SLC25A18Q9H1K4 315 aa18.58■□□□□ 0.56
SNX3-201ENST00000230085 SPACA6W5XKT8 324 aa18.58■□□□□ 0.56
SNX3-201ENST00000230085 IGHV5-51A0A0C4DH38 117 aa18.57■□□□□ 0.56
SNX3-201ENST00000230085 A0A0D9SG52 128 aa18.57■□□□□ 0.56
SNX3-201ENST00000230085 OR6C68A6NDL8 312 aa18.57■□□□□ 0.56
SNX3-201ENST00000230085 CYR61O00622 381 aa18.57■□□□□ 0.56
SNX3-201ENST00000230085 MAGEB4O15481 346 aaPredicted RBP18.57■□□□□ 0.56
SNX3-201ENST00000230085 EIF4E2O60573 245 aaKnown RBP18.57■□□□□ 0.56
SNX3-201ENST00000230085 PSMB10P40306 273 aa18.57■□□□□ 0.56
SNX3-201ENST00000230085 PSMD4P55036 377 aaKnown RBP18.57■□□□□ 0.56
SNX3-201ENST00000230085 GRHL3Q8TE85 626 aa18.57■□□□□ 0.56
SNX3-201ENST00000230085 PHYHIPLQ96FC7 376 aa18.57■□□□□ 0.56
SNX3-201ENST00000230085 OR1F2PQ96R84 312 aa18.57■□□□□ 0.56
SNX3-201ENST00000230085 C1QTNF6Q9BXI9 259 aa18.57■□□□□ 0.56
SNX3-201ENST00000230085 RASL12Q9NYN1 266 aa18.57■□□□□ 0.56
SNX3-201ENST00000230085 STEAP1Q9UHE8 339 aa18.57■□□□□ 0.56
SNX3-201ENST00000230085 HRH3Q9Y5N1 445 aa18.57■□□□□ 0.56
SNX3-201ENST00000230085 PMS2P2O95744 297 aa18.56■□□□□ 0.56
SNX3-201ENST00000230085 TXNDC12O95881 172 aa18.56■□□□□ 0.56
SNX3-201ENST00000230085 ITGB2P05107 769 aa18.56■□□□□ 0.56
SNX3-201ENST00000230085 AKAIN1P0CW23 69 aa18.56■□□□□ 0.56
SNX3-201ENST00000230085 PVRP15151 417 aa18.56■□□□□ 0.56
SNX3-201ENST00000230085 RPS15P62841 145 aaKnown RBP18.56■□□□□ 0.56
SNX3-201ENST00000230085 FLI1Q01543 452 aaPredicted RBP18.56■□□□□ 0.56
SNX3-201ENST00000230085 LTBQ06643 244 aa18.56■□□□□ 0.56
SNX3-201ENST00000230085 OR7E24Q6IFN5 339 aa18.56■□□□□ 0.56
SNX3-201ENST00000230085 LPCAT3Q6P1A2 487 aa18.56■□□□□ 0.56
SNX3-201ENST00000230085 FDX2Q6P4F2 183 aa18.56■□□□□ 0.56
SNX3-201ENST00000230085 MOB3CQ70IA8 216 aa18.56■□□□□ 0.56
SNX3-201ENST00000230085 NUP54Q7Z3B4 507 aa18.56■□□□□ 0.56
SNX3-201ENST00000230085 TMPRSS12Q86WS5 348 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms