RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 DNAAF1Q8NEP3 725 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 PRR7Q8TB68 274 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 SLC2A12Q8TD20 617 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 BMFQ96LC9 184 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 FAM86C1Q9NVL1 165 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 URADA6NGE7 173 aa8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 TNFSF14O43557 240 aa8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 NKX2-2O95096 273 aa8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 NDUFB2O95178 105 aa8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 NR2C1P13056 603 aa8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 CPT2P23786 658 aa8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 MST1P26927 711 aa8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 AP3S2P59780 193 aa8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 PLA2G7Q13093 441 aa8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 ERV3-1Q14264 604 aa8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 KIR2DS3Q14952 304 aa8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 PON3Q15166 354 aa8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 PCGF3Q3KNV8 242 aa8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 RPL22L1Q6P5R6 122 aaKnown RBP8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 TTLL10Q6ZVT0 673 aa8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 FAM219AQ8IW50 185 aa8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 YAF2Q8IY57 180 aa8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 CA13Q8N1Q1 262 aa8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 NPEPL1Q8NDH3 523 aa8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 STOML3Q8TAV4 291 aa8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 CASTOR1Q8WTX7 329 aa8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 RNF166Q96A37 237 aaPredicted RBP8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 SLC22A18Q96BI1 424 aa8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 VRK1Q99986 396 aaPredicted RBP8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 IGFLR1Q9H665 355 aa8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 OPN4Q9UHM6 478 aa8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 NOP16Q9Y3C1 178 aaKnown RBP8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 ENTPD2Q9Y5L3 495 aa8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 C19orf67A6NJJ6 358 aa8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 IFITM5A6NNB3 132 aa8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 TGFBR3LH3BV60 316 aa8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 PRAF2O60831 178 aa8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 SMIM6P0DI80 62 aa8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 TMIGD3P0DMS9 266 aaPredicted RBP8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 SPI1P17947 270 aa8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 S1PR1P21453 382 aa8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 DPP4P27487 766 aa8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 RPS27P42677 84 aaKnown RBP8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 NR0B1P51843 470 aaKnown RBP8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 SRSF3P84103 164 aaKnown RBP8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 SCGB2B2Q4G0G5 96 aa8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 UBE2NLQ5JXB2 153 aa8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 OTPQ5XKR4 325 aa8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 PARM1Q6UWI2 310 aa8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 LINC00114Q6XXX2 140 aa8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 OVCH1Q7RTY7 1134 aa8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 SYS1Q8N2H4 156 aa8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 OR9A4Q8NGU2 314 aa8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 RERGQ96A58 199 aaPredicted RBP8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 PARP12Q9H0J9 701 aaKnown RBP8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 LMAN2LQ9H0V9 348 aa8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 KLHL9Q9P2J3 617 aa8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 LRIT1Q9P2V4 623 aa8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 MOKQ9UQ07 419 aa8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 CEP290O15078 2479 aa8.54□□□□□ -1.04
HLA-DOA-201ENST00000229829 PQLC2LA1A4F0 135 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 A6NCN8 305 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 GSTZ1O43708 216 aaPredicted RBP8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 GALR3O60755 368 aaPredicted RBP8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 SNAPINO95295 136 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 ADH6P28332 368 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 DLSTP36957 453 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 DIO1P49895 249 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 CEBPGP53567 150 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 DYRK1AQ13627 763 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 PLEKHN1Q494U1 663 aaPredicted RBP8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 ZNF542PQ5EBM4 170 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 GLDNQ6ZMI3 551 aaPredicted RBP8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 RCBTB1Q8NDN9 531 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 OR4C3Q8NH37 302 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 LURAP1Q96LR2 239 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 CNTNAP3BQ96NU0 1288 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 PBX4Q9BYU1 374 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 LYRM4Q9HD34 91 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 FAM60AQ9NP50 221 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 C13orf42A0A1B0GVH6 325 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 A0A1W2PPE3 182 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 EFCAB7A8K855 629 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 MPTX1A8MV57 137 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 EEF1E1-BLOC1S5C9J1V9 151 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 OR10H2O60403 315 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 S100A8P05109 93 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 CA3P07451 260 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 FBXO45P0C2W1 286 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 GTF2F2P13984 249 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 ACTA2P62736 377 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 ACTG2P63267 376 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 UNQ9370/PRO34162Q6UXP9 181 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 KCTD9Q7L273 389 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 FOXRED2Q8IWF2 684 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 OR6V1Q8N148 313 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 GATSQ8NAP1 163 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 TCTEX1D2Q8WW35 142 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 TMED6Q8WW62 240 aa8.53□□□□□ -1.04
HLA-DOA-201ENST00000229829 EDARADDQ8WWZ3 215 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms