RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 OR1L3Q8NH93 324 aa16.85■□□□□ 0.29
CLIP2-201ENST00000223398 OLIG1Q8TAK6 271 aa16.85■□□□□ 0.29
CLIP2-201ENST00000223398 PBDC1Q9BVG4 233 aa16.85■□□□□ 0.29
CLIP2-201ENST00000223398 ASF1BQ9NVP2 202 aa16.85■□□□□ 0.29
CLIP2-201ENST00000223398 TTC3P53804 2025 aa16.85■□□□□ 0.29
CLIP2-201ENST00000223398 TSPAN15O95858 294 aa16.85■□□□□ 0.29
CLIP2-201ENST00000223398 PTTG1O95997 202 aa16.85■□□□□ 0.29
CLIP2-201ENST00000223398 THBS1P07996 1170 aa16.85■□□□□ 0.29
CLIP2-201ENST00000223398 BCL2A1Q16548 175 aa16.85■□□□□ 0.29
CLIP2-201ENST00000223398 ALKBH6Q3KRA9 238 aa16.85■□□□□ 0.29
CLIP2-201ENST00000223398 DHRS4L2Q6PKH6 230 aa16.85■□□□□ 0.29
CLIP2-201ENST00000223398 OR51D1Q8NGF3 324 aa16.85■□□□□ 0.29
CLIP2-201ENST00000223398 CNRIP1Q96F85 164 aaPredicted RBP16.85■□□□□ 0.29
CLIP2-201ENST00000223398 HIPK2Q9H2X6 1198 aa16.85■□□□□ 0.29
CLIP2-201ENST00000223398 P4HTMQ9NXG6 502 aa16.85■□□□□ 0.29
CLIP2-201ENST00000223398 MTCH2Q9Y6C9 303 aa16.85■□□□□ 0.29
CLIP2-201ENST00000223398 MYO5AQ9Y4I1 1855 aaKnown RBP16.85■□□□□ 0.29
CLIP2-201ENST00000223398 RPS23P62266 143 aaKnown RBP16.84■□□□□ 0.29
CLIP2-201ENST00000223398 OR52N5Q8NH56 324 aa16.84■□□□□ 0.29
CLIP2-201ENST00000223398 NUDT9Q9BW91 350 aa16.84■□□□□ 0.29
CLIP2-201ENST00000223398 PCED1AQ9H1Q7 454 aa16.84■□□□□ 0.29
CLIP2-201ENST00000223398 OR51J1Q9H342 316 aa16.84■□□□□ 0.29
CLIP2-201ENST00000223398 BANF2Q9H503 90 aa16.84■□□□□ 0.29
CLIP2-201ENST00000223398 TIMM10BQ9Y5J6 103 aa16.84■□□□□ 0.29
CLIP2-201ENST00000223398 BOLA2-SMG1P6H3BVE0 249 aa16.84■□□□□ 0.29
CLIP2-201ENST00000223398 DEGS1O15121 323 aa16.84■□□□□ 0.29
CLIP2-201ENST00000223398 NXPH3O95157 252 aa16.84■□□□□ 0.29
CLIP2-201ENST00000223398 FKBP2P26885 142 aaKnown RBP16.84■□□□□ 0.29
CLIP2-201ENST00000223398 DUSP8Q13202 625 aa16.84■□□□□ 0.29
CLIP2-201ENST00000223398 C12orf45Q8N5I9 185 aaPredicted RBP16.84■□□□□ 0.29
CLIP2-201ENST00000223398 OR51E1Q8TCB6 317 aa16.84■□□□□ 0.29
CLIP2-201ENST00000223398 SUCNR1Q9BXA5 334 aa16.84■□□□□ 0.29
CLIP2-201ENST00000223398 APOC3P02656 99 aa16.84■□□□□ 0.29
CLIP2-201ENST00000223398 PRKACAP17612 351 aa16.84■□□□□ 0.29
CLIP2-201ENST00000223398 RPL18Q07020 188 aaKnown RBP16.84■□□□□ 0.29
CLIP2-201ENST00000223398 DNAJC5GQ8N7S2 189 aa16.84■□□□□ 0.29
CLIP2-201ENST00000223398 A0A1B0GTL3 188 aa16.84■□□□□ 0.29
CLIP2-201ENST00000223398 BCKDHBP21953 392 aa16.84■□□□□ 0.29
CLIP2-201ENST00000223398 FOXF1Q12946 379 aa16.84■□□□□ 0.29
CLIP2-201ENST00000223398 CLN3Q13286 438 aa16.84■□□□□ 0.29
CLIP2-201ENST00000223398 PLK5Q496M5 336 aa16.84■□□□□ 0.29
CLIP2-201ENST00000223398 BEX5Q5H9J7 111 aa16.84■□□□□ 0.29
CLIP2-201ENST00000223398 BARHL1Q9BZE3 327 aa16.84■□□□□ 0.29
CLIP2-201ENST00000223398 RPH3ALQ9UNE2 315 aa16.84■□□□□ 0.29
CLIP2-201ENST00000223398 RNF212BA8MTL3 300 aa16.83■□□□□ 0.29
CLIP2-201ENST00000223398 EPHA8P29322 1005 aaPredicted RBP16.83■□□□□ 0.29
CLIP2-201ENST00000223398 FAM219BQ5XKK7 198 aa16.83■□□□□ 0.29
CLIP2-201ENST00000223398 FAM198BQ6UWH4 519 aa16.83■□□□□ 0.29
CLIP2-201ENST00000223398 TMEM102Q8N9M5 508 aaPredicted RBP16.83■□□□□ 0.29
CLIP2-201ENST00000223398 OR2A14Q96R47 310 aa16.83■□□□□ 0.29
CLIP2-201ENST00000223398 ACOXLQ9NUZ1 547 aa16.83■□□□□ 0.29
CLIP2-201ENST00000223398 SLC25A37Q9NYZ2 338 aa16.83■□□□□ 0.29
CLIP2-201ENST00000223398 DIMT1Q9UNQ2 313 aaKnown RBP16.83■□□□□ 0.29
CLIP2-201ENST00000223398 PAPPAQ13219 1627 aa16.83■□□□□ 0.29
CLIP2-201ENST00000223398 TRIM64CA6NLI5 447 aa16.83■□□□□ 0.29
CLIP2-201ENST00000223398 PNLIPRP2P54317 469 aa16.83■□□□□ 0.29
CLIP2-201ENST00000223398 FGFBP1Q14512 234 aa16.83■□□□□ 0.29
CLIP2-201ENST00000223398 USP51Q70EK9 711 aa16.83■□□□□ 0.29
CLIP2-201ENST00000223398 ANGPTL5Q86XS5 388 aa16.83■□□□□ 0.29
CLIP2-201ENST00000223398 PTRH1Q86Y79 214 aaKnown RBP16.83■□□□□ 0.29
CLIP2-201ENST00000223398 TSSK2Q96PF2 358 aa16.83■□□□□ 0.29
CLIP2-201ENST00000223398 RTL8AQ9BWD3 113 aa16.83■□□□□ 0.29
CLIP2-201ENST00000223398 IGHV1OR21-1A0A087WYE8 117 aa16.83■□□□□ 0.28
CLIP2-201ENST00000223398 PEX11BO96011 259 aa16.83■□□□□ 0.28
CLIP2-201ENST00000223398 PTGS2P35354 604 aa16.83■□□□□ 0.28
CLIP2-201ENST00000223398 MRPL19P49406 292 aaKnown RBP16.83■□□□□ 0.28
CLIP2-201ENST00000223398 HEPHL1Q6MZM0 1159 aa16.83■□□□□ 0.28
CLIP2-201ENST00000223398 CD300LGQ6UXG3 332 aa16.83■□□□□ 0.28
CLIP2-201ENST00000223398 OR10K1Q8NGX5 313 aa16.83■□□□□ 0.28
CLIP2-201ENST00000223398 SLAMF9Q96A28 289 aa16.83■□□□□ 0.28
CLIP2-201ENST00000223398 FRG2CA6NGY1 282 aa16.83■□□□□ 0.28
CLIP2-201ENST00000223398 ACOT8O14734 319 aa16.83■□□□□ 0.28
CLIP2-201ENST00000223398 IHHQ14623 411 aa16.83■□□□□ 0.28
CLIP2-201ENST00000223398 FXNQ16595 210 aa16.83■□□□□ 0.28
CLIP2-201ENST00000223398 WIPI1Q5MNZ9 446 aaPredicted RBP16.83■□□□□ 0.28
CLIP2-201ENST00000223398 SFXN4Q6P4A7 337 aa16.83■□□□□ 0.28
CLIP2-201ENST00000223398 DVL3Q92997 716 aaPredicted RBP16.83■□□□□ 0.28
CLIP2-201ENST00000223398 SLAMF6Q96DU3 332 aa16.83■□□□□ 0.28
CLIP2-201ENST00000223398 TEAD3Q99594 435 aa16.83■□□□□ 0.28
CLIP2-201ENST00000223398 C1QTNF3Q9BXJ4 246 aa16.83■□□□□ 0.28
CLIP2-201ENST00000223398 SPINT2O43291 252 aa16.83■□□□□ 0.28
CLIP2-201ENST00000223398 OMGP23515 440 aa16.83■□□□□ 0.28
CLIP2-201ENST00000223398 KIR2DL3P43628 341 aa16.83■□□□□ 0.28
CLIP2-201ENST00000223398 FABP6P51161 128 aa16.83■□□□□ 0.28
CLIP2-201ENST00000223398 SYT14P1Q58G82 188 aa16.83■□□□□ 0.28
CLIP2-201ENST00000223398 SLC35D3Q5M8T2 416 aa16.83■□□□□ 0.28
CLIP2-201ENST00000223398 PDZD9Q8IXQ8 264 aa16.83■□□□□ 0.28
CLIP2-201ENST00000223398 ADGRF3Q8IZF5 1079 aa16.83■□□□□ 0.28
CLIP2-201ENST00000223398 SPACA9Q96E40 222 aaPredicted RBP16.83■□□□□ 0.28
CLIP2-201ENST00000223398 HES7Q9BYE0 225 aa16.83■□□□□ 0.28
CLIP2-201ENST00000223398 SERTAD4Q9NUC0 356 aa16.83■□□□□ 0.28
CLIP2-201ENST00000223398 TXNL4BQ9NX01 149 aaKnown RBP16.83■□□□□ 0.28
CLIP2-201ENST00000223398 CLEC1BQ9P126 229 aa16.83■□□□□ 0.28
CLIP2-201ENST00000223398 EDARQ9UNE0 448 aa16.83■□□□□ 0.28
CLIP2-201ENST00000223398 A0A1W2PPV4 95 aa16.82■□□□□ 0.28
CLIP2-201ENST00000223398 CPT2P23786 658 aa16.82■□□□□ 0.28
CLIP2-201ENST00000223398 GNB2P62879 340 aa16.82■□□□□ 0.28
CLIP2-201ENST00000223398 LSAMPQ13449 338 aa16.82■□□□□ 0.28
CLIP2-201ENST00000223398 STEAP3Q658P3 488 aa16.82■□□□□ 0.28
CLIP2-201ENST00000223398 ANKRD34AQ69YU3 496 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms