RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Usp51B1AY15 661 aa15.44■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 9130204L05RikG3UWB8 92 aa15.44■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 NodalP43021 354 aa15.44■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Ifna16Q810G1 189 aa15.44■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Zc3h12dQ8BIY3 533 aa15.44■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Hmgcll1Q8JZS7 343 aa15.44■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Kiaa0513Q8R0A7 407 aa15.44■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Med30Q9CQI9 178 aa15.44■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Gm11758A2BEI6 360 aa15.44■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Gm11757A2BEI8 360 aa15.44■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Adcyap1r1P70205 496 aa15.44■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Pnrc1Q3TWH3 297 aa15.44■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Kmt5cQ6Q783 468 aa15.44■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 InavaQ7TN12 663 aa15.44■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Lkaaear1Q8BIG2 198 aa15.44■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Vmn1r192Q8K4C9 300 aa15.44■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Smim3Q99PE5 60 aa15.44■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Nudt21Q9CQF3 227 aaKnown RBP15.44■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 ClppO88696 272 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 GsrP47791 500 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 PhyhiplQ8BGT8 375 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Olfr160Q8VGE3 309 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 NrarpQ91ZA8 114 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 CenpmQ9CQA0 180 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Mkrn2Q9ERV1 416 aaKnown RBP15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Gm17087V9GXQ2 156 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Hsd3b3P26150 373 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 ApodP51910 189 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Rab3cP62823 227 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 MyorgQ69ZQ1 716 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Exosc3Q7TQK4 274 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 IfnkQ7TSL0 199 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Slc22a21Q9WTN6 564 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Vmn1r16K7N775 303 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Ifna5P07349 189 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Epha4Q03137 986 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 DdnQ80TS7 710 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Slc38a1Q8K2P7 485 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Vmn1r33Q8R2E0 305 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Tbl2Q9R099 442 aaKnown RBP15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Gm13539A0A1B0GSM6 183 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Gm11634A0A1B0GSX1 172 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Tmem201A2A8U2 664 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 PrkacaP05132 351 aaKnown RBP15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 FlgP11088 336 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 SiaeP70665 541 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Gpr39Q5U431 456 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Olfr1321Q7TQW4 319 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Fam155aQ8CCS2 467 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Vmn1r193Q8R258 319 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Slc35b3Q922Q5 369 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Tmbim7Q9D592 302 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Gm29797A0A140LIA7 188 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Olfr11Q60890 313 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 IdnkQ8R0J8 184 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Gm10718D3Z1I7 227 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 H3f3cP02301 136 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Cst3P21460 140 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Dynlrb1P62627 96 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 H3f3aP84244 136 aaKnown RBP15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Cpne4Q8BLR2 557 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Pi15Q8BS03 258 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 A930004D18RikQ8C8W7 157 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Olfr1390Q8VGW9 311 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Slc39a8Q91W10 462 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Olfr1082A0A1L1SUC9 313 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Znf271P15620 580 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Rpl18P35980 188 aaKnown RBP15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Taar8bQ5QD06 344 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Frg2f1Q6P3A2 227 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Babam2Q8K3W0 383 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Olfr446Q8VEV0 308 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Rd3lB2RV38 197 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 GypaP14220 168 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Arntl2Q2VPD4 579 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 B4gat1Q8BWP8 415 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Olfr633Q8VF02 312 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Dmbx1Q91ZK4 381 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Moxd1Q9CXI3 613 aa15.43■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Vmn2r80E9Q1L0 863 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 OpcmlG5E8G3 345 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Vmn2r58K7N6V2 862 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Fbxw15L7N1X6 466 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 EndouQ3V188 412 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 MlipQ5FW52 269 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Olfr1196Q7TR14 314 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Olfr835Q7TRG7 311 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Olfr1151Q8VFQ8 308 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Flvcr2Q91X85 551 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Olfr937Q9EQB4 311 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Ankrd16A2AS55 361 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 EmdO08579 259 aaKnown RBP15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Matn4O89029 624 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 S100a10P08207 97 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Rpl7P14148 270 aaKnown RBP15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 MagP20917 626 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Adam9Q61072 845 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Olfr1225Q7TR01 311 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Vmn2r82G3UWA2 865 aa15.42■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Vmn2r66K7N6R9 851 aa15.42■□□□□ 0.06
Retrieved 100 of 22,080 RNA–protein pairs in 29.4 ms