RNA–Protein interactions for RNA: ENSMUST00000030586.14

Ccdc28b-201, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28b, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-201ENSMUST00000030586 Ribc2Q9D4Q1 309 aa10.03□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Sec23bQ9D662 767 aa10.03□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Tex22Q9D9U4 189 aa10.03□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Med29Q9DB91 199 aa10.03□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Tas2r4Q9JKT3 297 aa10.03□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Hcfc1Q61191 2045 aaKnown RBP10.02□□□□□ -0.8
Ccdc28b-201ENSMUST00000030586 Adamts17E9Q4D1 1122 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Maml2F6U238 1170 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Zfp988F6VKC7 633 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Zfp989H3BLB0 661 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Gm21411J3KMS0 136 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Gm8660K7N6J2 305 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Vmn2r89O35199 507 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 CidebO70303 219 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Nme6O88425 189 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Ccl22O88430 92 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Creg1O88668 220 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Sc5dO88822 299 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 ItgamP05555 1153 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Igf2P09535 180 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Gpr52P0C5J4 361 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 LynP25911 512 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Edn3P48299 214 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Cbr1P48758 277 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Mrps21P58059 87 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Tbc1d10aP58802 500 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Pou3f4P62515 361 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Kpnb1P70168 876 aaKnown RBP10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Lrig1P70193 1091 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 MestQ07646 335 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Map6d1Q14BB9 191 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Q32P12 615 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Zfp987Q32P14 633 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Q3U1D9 316 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Isg20l2Q3U1G5 368 aaKnown RBP10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Macrod2Q3UYG8 475 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Gm136Q3V037 328 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Pcnx2Q5DU28 2122 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Dtx1Q61010 627 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Ptpmt1Q66GT5 193 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Znf503Q7TMA2 652 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Cpeb3Q7TN99 716 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Fbxo5Q7TSG3 421 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Sgpp2Q810K3 354 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 PigzQ8BTP0 560 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Aph1aQ8BVF7 265 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Lypd4Q8BVP6 246 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Vps9d1Q8C190 649 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Trib3Q8K4K2 354 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Vmn1r30Q8R2D2 302 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 D1Ertd622eQ8VEB3 207 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Olfr170Q8VGL6 313 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Oasl1Q8VI94 511 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Rbmxl1Q91VM5 388 aaKnown RBP10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Plpp7Q91WB2 271 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Lims1Q99JW4 325 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Pwp1Q99LL5 501 aaKnown RBP10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 CygbQ9CX80 190 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Med31Q9CXU1 131 aaKnown RBP10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 CstadQ9D245 104 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Ptp4a3Q9D658 173 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 MtfmtQ9D799 386 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Tmem68Q9D850 329 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 UqcrbQ9D855 111 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 SlirpQ9D8T7 112 aaKnown RBP10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Ttc32Q9DAC7 148 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Nubp1Q9R060 320 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 LipaQ9Z0M5 397 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Xpr1Q9Z0U0 695 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Zfp68Q9Z116 606 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Dock9Q8BIK4 2055 aa10.02□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Unc79Q0KK59 2596 aa10.01□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Igkv13-85A0A075B666 115 aa10.01□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Mfsd13bA0A1L1SUA2 455 aa10.01□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Ttll3A4Q9E5 927 aa10.01□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Aadacl2B2RWD2 401 aa10.01□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Cdr1E9Q0B4 517 aa10.01□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 A530032D15RikE9Q422 215 aa10.01□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Mknk1O08605 427 aa10.01□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Anxa3O35639 323 aa10.01□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Hprt1P00493 218 aa10.01□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Fkbp2P45878 140 aaKnown RBP10.01□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 AcadvlP50544 656 aa10.01□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Cpt2P52825 658 aaKnown RBP10.01□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Abcd3P55096 659 aa10.01□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Cmklr1P97468 371 aa10.01□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Gspt2Q149F3 632 aa10.01□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Nkain3Q3URJ8 181 aa10.01□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Cep44Q5HZK1 386 aa10.01□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Wdr34Q5U4F6 535 aa10.01□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Olfr9Q60885 312 aa10.01□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Sox17Q61473 419 aa10.01□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Egfl8Q6GUQ1 293 aa10.01□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 RimklaQ6PFX8 380 aa10.01□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 DcstampQ7TNJ0 470 aa10.01□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Olfr1349Q7TQV1 317 aa10.01□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Olfr301Q7TS04 311 aa10.01□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Gpr171Q8BG55 319 aa10.01□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 Steap3Q8CI59 488 aa10.01□□□□□ -0.81
Ccdc28b-201ENSMUST00000030586 LiphQ8CIV3 451 aa10.01□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 58.2 ms